Os11g0684200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os11g0684200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.84 | 0.369 | 8.54 | 1.3 | 0.68 | 1.09 | 0.222 | 1.61 | 0.291 | 4.42 | 1.07 | 1479 | -- | -- |
| 63.53 | 0.371 | 8.55 | 1.16 | 0.691 | 0.879 | 0.145 | -- | 0.305 | 4.3 | 1.661 | 1494 | -- | -- |
| 61.89 | 0.366 | 8.54 | 1.3 | 0.685 | 1.13 | -- | 1.65 | 0.291 | 4.4 | 1.02 | 1480 | -- | -- |
| 63.39 | 0.371 | 8.54 | 1.17 | 0.673 | 0.862 | -- | -- | 0.285 | 4.55 | 1.66 | 1480 | -- | -- |
| 84.3 | 0.428 | 8.54 | 1.36 | -- | 1.05 | -- | 1.77 | 0.32 | -- | 1.01 | 1430 | -- | -- |
| 74.13 | 0.404 | 8.53 | 1.27 | 0.662 | -- | 0.215 | -- | 0.367 | 5.05 | -- | -- | -- | -- |
| 74.25 | 0.404 | 8.53 | 1.27 | 0.663 | -- | -- | -- | 0.366 | 5.05 | -- | -- | -- | -- |
| 85.27 | 0.43 | 8.57 | 1.17 | -- | 0.834 | -- | -- | 0.266 | -- | 1.84 | 1430 | -- | -- |
| 95.46 | 0.455 | 8.57 | -- | 0.741 | 1.47 | -- | -- | 0.255 | 4.08 | 0.7321 | 1484 | -- | -- |
| 97.34 | 0.461 | 8.54 | 1.3 | -- | -- | -- | -- | 0.383 | -- | -- | -- | -- | -- |
| 117.06 | 0.506 | 8.56 | -- | 0.686 | -- | -- | -- | 0.224 | 4.99 | -- | -- | -- | -- |
| 117.42 | 0.505 | 8.59 | -- | -- | 1.39 | -- | -- | 0.0907 | -- | 0.8294 | 1422 | -- | -- |
| 141.81 | 0.556 | 8.57 | -- | -- | -- | -- | -- | 0.239 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.55 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 9 | 58.71 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 12 | 58.88 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 14 | 58.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 15 | 58.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 21 | 59.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 22 | 59.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 25 | 59.07 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 26 | 59.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 4 |
| 28 | 59.10 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 29 | 59.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 30 | 59.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 41 | 59.32 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 42 | 59.33 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 48 | 59.39 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 3 |
| 52 | 59.48 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 60 | 59.53 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 3 |
| 63 | 59.58 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 70 | 59.69 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 72 | 59.71 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 80 | 59.77 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 85 | 59.85 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 86 | 59.86 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 93 | 59.91 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 94 | 59.91 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 96 | 59.92 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 97 | 59.92 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 98 | 59.92 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 100 | 59.92 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 102 | 59.92 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 7 |
| 104 | 59.93 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 5 |
| 106 | 59.93 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 5 |
| 118 | 60.00 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 124 | 60.02 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 138 | 60.06 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 139 | 60.06 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 144 | 60.09 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 170 | 60.16 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 192 | 60.25 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 10 |
| 193 | 60.26 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 214 | 60.28 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 238 | 60.33 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 11 | 8 |
| 266 | 60.39 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 24 | 9 |
| 271 | 60.41 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 289 | 60.45 | humidity | 60.0 | 43200 | > th | dose dependent | rect. | 14 | 2 |
| 291 | 60.45 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 7 |
| 297 | 60.47 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 350 | 60.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 17 |
| 387 | 60.60 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 401 | 60.62 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 412 | 60.63 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 424 | 60.64 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 458 | 60.66 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 15 |
| 459 | 60.66 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 16 |
| 528 | 60.75 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 14 | 13 |
| 596 | 60.80 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 646 | 60.82 | radiation | 10.0 | 14400 | < th | dose dependent | sin | 17 | NA |
| 688 | 60.85 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 703 | 60.86 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 16 | NA |
| 736 | 60.87 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 22 | 20 |
| 739 | 60.88 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 740 | 60.88 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 789 | 60.90 | radiation | 10.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 792 | 60.90 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 8 |
| 794 | 60.90 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 887 | 60.94 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 11 | 19 |
| 889 | 60.94 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 938 | 60.96 | temperature | 25.0 | 14400 | > th | dose dependent | no | NA | NA |
| 954 | 60.96 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 3 | 23 |