Os11g0682600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0682600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.48 | 0.218 | 3 | -0.0124 | 0.0891 | 0.148 | -0.0775 | 0.464 | -0.0297 | 9.32 | 1012 | 5069 | -- | -- |
| 21.61 | 0.217 | 2.99 | 0.125 | 0.0885 | 0.153 | -0.0909 | -- | 0.00877 | 9.46 | 1013 | 11387 | -- | -- |
| 21.5 | 0.216 | 3 | -0.0151 | 0.0889 | 0.147 | -- | 0.464 | -0.0297 | 9.36 | 1012 | 5017 | -- | -- |
| 21.63 | 0.217 | 2.99 | 0.122 | 0.089 | 0.153 | -- | -- | 0.00794 | 9.33 | 1013 | 11562 | -- | -- |
| 21.97 | 0.218 | 3 | -0.019 | -- | 0.15 | -- | 0.471 | -0.0316 | -- | 1012 | 5090 | -- | -- |
| 22.43 | 0.222 | 3 | 0.0497 | 0.0884 | -- | -0.0874 | -- | -0.0311 | 9.37 | -- | -- | -- | -- |
| 22.46 | 0.222 | 3 | 0.0466 | 0.0886 | -- | -- | -- | -0.0312 | 9.44 | -- | -- | -- | -- |
| 22.08 | 0.219 | 2.99 | 0.12 | -- | 0.153 | -- | -- | 0.00827 | -- | 1013 | 11557 | -- | -- |
| 21.95 | 0.218 | 2.99 | -- | 0.0885 | 0.117 | -- | -- | -0.0125 | 9.35 | 1013 | 11068 | -- | -- |
| 22.92 | 0.224 | 3 | 0.0461 | -- | -- | -- | -- | -0.0309 | -- | -- | -- | -- | -- |
| 22.52 | 0.222 | 3 | -- | 0.0886 | -- | -- | -- | -0.0364 | 9.4 | -- | -- | -- | -- |
| 22.4 | 0.22 | 2.99 | -- | -- | 0.117 | -- | -- | -0.0122 | -- | 1013 | 11238 | -- | -- |
| 22.98 | 0.224 | 3 | -- | -- | -- | -- | -- | -0.036 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.85 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 2 | 20.87 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 3 | 20.88 | humidity | 70 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 4 | 20.88 | humidity | 70 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 27 | 20.96 | humidity | 80 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 31 | 21.02 | humidity | 60 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 36 | 21.09 | humidity | 50 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 99 | 21.11 | humidity | 60 | 14400 | < th | dose dependent | sin | 7 | NA |
| 133 | 21.15 | humidity | 50 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 146 | 21.15 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 147 | 21.15 | humidity | 60 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 151 | 21.16 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 157 | 21.17 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 158 | 21.17 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 162 | 21.17 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 173 | 21.17 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 178 | 21.17 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 235 | 21.18 | atmosphere | 1015 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 237 | 21.18 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 13 | 2 |
| 241 | 21.18 | atmosphere | 1015 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 289 | 21.18 | radiation | 20 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 343 | 21.19 | atmosphere | 1015 | 14400 | > th | dose independent | sin | 22 | NA |
| 345 | 21.19 | atmosphere | 1015 | 14400 | < th | dose independent | sin | 22 | NA |
| 412 | 21.19 | humidity | 50 | 14400 | < th | dose dependent | sin | 22 | NA |
| 422 | 21.19 | atmosphere | 1015 | 14400 | > th | dose dependent | sin | 19 | NA |
| 523 | 21.20 | atmosphere | 1015 | 14400 | > th | dose independent | sin | 20 | NA |
| 528 | 21.20 | atmosphere | 1015 | 14400 | < th | dose independent | sin | 19 | NA |
| 535 | 21.20 | radiation | 40 | 90 | > th | dose independent | rect. | 15 | 1 |
| 692 | 21.20 | humidity | 50 | 14400 | < th | dose dependent | sin | 19 | NA |
| 695 | 21.20 | humidity | 50 | 14400 | < th | dose dependent | no | NA | NA |
| 700 | 21.20 | atmosphere | 1015 | 14400 | > th | dose dependent | no | NA | NA |
| 701 | 21.20 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 702 | 21.20 | radiation | 40 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 979 | 21.20 | atmosphere | 1015 | 14400 | > th | dose dependent | rect. | 16 | 22 |