Os11g0682000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0682000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.33 | 0.54 | 3.38 | 0.178 | 0.223 | 0.0392 | 0.312 | 10.4 | -0.0446 | 7.82 | 0.4143 | 10 | -- | -- |
| 132.56 | 0.536 | 3.39 | 0.163 | 0.215 | 3.04 | 0.279 | -- | -0.045 | 7.81 | 0.3996 | 2 | -- | -- |
| 132.54 | 0.536 | 3.38 | 0.193 | 0.222 | -0.549 | -- | 12.5 | -0.046 | 7.51 | 0.4348 | 7 | -- | -- |
| 132.75 | 0.537 | 3.39 | 0.172 | 0.218 | 3.05 | -- | -- | -0.0457 | 7.54 | 0.4399 | 2 | -- | -- |
| 135.06 | 0.541 | 3.39 | 0.187 | -- | 0.553 | -- | 8.91 | -0.0427 | -- | 0.4084 | 5 | -- | -- |
| 141.68 | 0.558 | 3.39 | 0.197 | 0.232 | -- | 0.319 | -- | -0.0508 | 7.33 | -- | -- | -- | -- |
| 141.95 | 0.558 | 3.39 | 0.204 | 0.233 | -- | -- | -- | -0.0516 | 7.18 | -- | -- | -- | -- |
| 135.25 | 0.544 | 3.39 | 0.177 | -- | 3.1 | -- | -- | -0.0422 | -- | 0.4084 | 5 | -- | -- |
| 133.52 | 0.538 | 3.39 | -- | 0.219 | 3.09 | -- | -- | -0.0637 | 7.49 | 0.3986 | 2 | -- | -- |
| 144.83 | 0.562 | 3.4 | 0.208 | -- | -- | -- | -- | -0.0475 | -- | -- | -- | -- | -- |
| 143.05 | 0.559 | 3.4 | -- | 0.235 | -- | -- | -- | -0.0743 | 7.13 | -- | -- | -- | -- |
| 135.96 | 0.543 | 3.4 | -- | -- | 3.15 | -- | -- | -0.059 | -- | 0.4247 | 5 | -- | -- |
| 145.97 | 0.564 | 3.4 | -- | -- | -- | -- | -- | -0.0706 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.63 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 124.54 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 6 | 3 |
| 4 | 125.09 | radiation | 30.0 | 90 | > th | dose dependent | rect. | 7 | 1 |
| 20 | 125.37 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 7 | 1 |
| 27 | 125.37 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 46 | 126.67 | radiation | 30.0 | 270 | > th | dose independent | rect. | 7 | 1 |
| 92 | 128.62 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 3 | 5 |
| 115 | 130.16 | temperature | 25.0 | 30 | > th | dose independent | rect. | 7 | 1 |
| 127 | 130.47 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 7 | 1 |
| 128 | 130.56 | temperature | 25.0 | 270 | > th | dose independent | rect. | 4 | 3 |
| 131 | 130.68 | temperature | 30.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 175 | 131.36 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 207 | 131.80 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 7 |
| 210 | 131.87 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 4 | 4 |
| 226 | 132.06 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 8 | 23 |
| 228 | 132.06 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 230 | 132.09 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 15 |
| 235 | 132.10 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 23 |
| 236 | 132.10 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 237 | 132.11 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 21 | 23 |
| 239 | 132.11 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 242 | 132.14 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 15 |
| 247 | 132.16 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 23 | 19 |
| 249 | 132.18 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 23 | 19 |
| 284 | 132.40 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 1 | NA |
| 290 | 132.42 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 20 | 12 |
| 302 | 132.46 | wind | 3.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 304 | 132.46 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 339 | 132.60 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 341 | 132.60 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 4 | 2 |
| 345 | 132.60 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 346 | 132.60 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 4 | 2 |
| 371 | 132.61 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 23 | 6 |
| 390 | 132.64 | precipitation | 0.1 | 10 | > th | dose independent | sin | 1 | NA |
| 413 | 132.67 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 23 | 6 |
| 464 | 132.74 | precipitation | 0.1 | 10 | < th | dose independent | sin | 5 | NA |
| 465 | 132.74 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 7 | NA |
| 466 | 132.74 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 5 | NA |
| 596 | 132.83 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 17 | 12 |
| 660 | 132.86 | precipitation | 0.1 | 10 | < th | dose independent | sin | 2 | NA |
| 661 | 132.86 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 2 | NA |
| 706 | 132.90 | radiation | 20.0 | 10 | > th | dose independent | rect. | 8 | 1 |
| 789 | 132.97 | precipitation | 0.1 | 10 | > th | dose dependent | no | NA | NA |