Os11g0679900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to DYW10 protein (Fragment).
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Os11g0679900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to DYW10 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 42.74 | 0.307 | 8.68 | 1.02 | 0.892 | 1.06 | 0.386 | 1.41 | 0.39 | 21.4 | 21 | 223 | -- | -- |
| 44.75 | 0.312 | 8.7 | 0.845 | 0.878 | 1.12 | 0.185 | -- | 0.361 | 21.3 | 21.2 | 243 | -- | -- |
| 43.24 | 0.306 | 8.68 | 1.02 | 0.872 | 1.05 | -- | 1.48 | 0.396 | 21.4 | 20.99 | 244 | -- | -- |
| 44.61 | 0.311 | 8.72 | 0.739 | 0.895 | 1.19 | -- | -- | 0.317 | 21.5 | 21.44 | 203 | -- | -- |
| 70.73 | 0.392 | 8.68 | 0.946 | -- | 1.44 | -- | 1.51 | 0.327 | -- | 20.88 | 531 | -- | -- |
| 67.4 | 0.385 | 8.68 | 1.02 | 1.1 | -- | 0.77 | -- | 0.509 | 19.8 | -- | -- | -- | -- |
| 69.09 | 0.389 | 8.68 | 0.996 | 1.09 | -- | -- | -- | 0.509 | 19.9 | -- | -- | -- | -- |
| 71.63 | 0.394 | 8.71 | 0.631 | -- | 1.53 | -- | -- | 0.239 | -- | 21.27 | 544 | -- | -- |
| 57.78 | 0.354 | 8.74 | -- | 0.895 | 1.42 | -- | -- | 0.202 | 22 | 21.13 | 204 | -- | -- |
| 134.18 | 0.541 | 8.65 | 0.984 | -- | -- | -- | -- | 0.494 | -- | -- | -- | -- | -- |
| 95.23 | 0.456 | 8.7 | -- | 1.09 | -- | -- | -- | 0.398 | 19.9 | -- | -- | -- | -- |
| 81.31 | 0.42 | 8.73 | -- | -- | 1.69 | -- | -- | 0.14 | -- | 20.61 | 563 | -- | -- |
| 159.69 | 0.59 | 8.67 | -- | -- | -- | -- | -- | 0.385 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 12 | 39.54 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 18 | 39.82 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 6 |
| 25 | 40.01 | temperature | 15 | 270 | > th | dose dependent | sin | 1 | NA |
| 29 | 40.08 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 45 | 40.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 15 |
| 60 | 40.81 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 6 |
| 67 | 40.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 96 | 41.36 | temperature | 20 | 720 | > th | dose dependent | sin | 6 | NA |
| 97 | 41.38 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 15 |
| 113 | 41.55 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 16 |
| 114 | 41.55 | temperature | 20 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 138 | 41.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 144 | 41.73 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 153 | 41.77 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 13 |
| 155 | 41.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 8 | 6 |
| 188 | 41.97 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 201 | 42.05 | temperature | 25 | 270 | > th | dose independent | sin | 23 | NA |
| 243 | 42.20 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 246 | 42.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 15 |
| 270 | 42.30 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 20 |
| 346 | 42.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 12 |
| 357 | 42.67 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 5 |
| 389 | 42.76 | temperature | 25 | 270 | < th | dose independent | sin | 23 | NA |
| 503 | 43.09 | temperature | 30 | 270 | < th | dose dependent | rect. | 18 | 21 |
| 505 | 43.10 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 562 | 43.29 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 574 | 43.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |
| 681 | 43.52 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 23 |
| 815 | 43.79 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 8 |
| 996 | 44.11 | temperature | 10 | 270 | > th | dose dependent | rect. | 9 | 23 |