Os11g0675200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NBS-LRR type resistance protein (Fragment).
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Os11g0675200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NBS-LRR type resistance protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.67 | 0.522 | 5.68 | 1.93 | 0.0745 | -1.44 | 0.161 | 3.41 | 0.21 | 9.59 | 25.34 | 4370 | -- | -- |
| 125.93 | 0.523 | 5.72 | 1.29 | 0.123 | -1.11 | 0.127 | -- | 0.291 | 10.2 | 20.88 | 5814 | -- | -- |
| 123.74 | 0.518 | 5.68 | 1.95 | 0.0767 | -1.45 | -- | 3.5 | 0.21 | 10.6 | 25.42 | 4385 | -- | -- |
| 124.83 | 0.52 | 5.71 | 1.44 | 0.0583 | -1.24 | -- | -- | 0.373 | 10.6 | 18 | 6777 | -- | -- |
| 124.08 | 0.519 | 5.68 | 1.97 | -- | -1.46 | -- | 3.55 | 0.214 | -- | 25.4 | 4364 | -- | -- |
| 163.88 | 0.6 | 5.79 | 0.755 | 0.134 | -- | 0.154 | -- | 0.00096 | 11.4 | -- | -- | -- | -- |
| 163.98 | 0.6 | 5.79 | 0.762 | 0.134 | -- | -- | -- | 0.00182 | 11.7 | -- | -- | -- | -- |
| 125.03 | 0.521 | 5.71 | 1.44 | -- | -1.25 | -- | -- | 0.374 | -- | 18.05 | 6756 | -- | -- |
| 157.72 | 0.585 | 5.8 | -- | 0.116 | -0.659 | -- | -- | -0.124 | 10.4 | 28.17 | 5685 | -- | -- |
| 165.1 | 0.6 | 5.79 | 0.758 | -- | -- | -- | -- | 0.000194 | -- | -- | -- | -- | -- |
| 179.27 | 0.626 | 5.81 | -- | 0.125 | -- | -- | -- | -0.083 | 11.3 | -- | -- | -- | -- |
| 157.82 | 0.585 | 5.83 | -- | -- | -0.73 | -- | -- | -0.174 | -- | 28.2 | 5104 | -- | -- |
| 180.25 | 0.627 | 5.81 | -- | -- | -- | -- | -- | -0.0839 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.53 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 3 |
| 4 | 120.17 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 8 | 120.95 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 12 | 121.64 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 13 | 121.69 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 14 | 121.77 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 17 | 121.85 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 21 | 122.17 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 29 | 122.74 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 31 | 122.94 | humidity | 90 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 32 | 123.00 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 38 | 123.39 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 40 | 123.41 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 18 |
| 42 | 123.43 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 21 |
| 46 | 123.49 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 51 | 123.51 | temperature | 25 | 4320 | < th | dose independent | rect. | 16 | 8 |
| 53 | 123.54 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 5 |
| 66 | 123.61 | temperature | 25 | 4320 | > th | dose dependent | sin | 6 | NA |
| 67 | 123.61 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 18 |
| 73 | 123.63 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 1 |
| 85 | 123.67 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 105 | 123.70 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 22 |
| 134 | 123.75 | temperature | 25 | 4320 | > th | dose dependent | rect. | 19 | 23 |
| 147 | 123.78 | temperature | 25 | 4320 | > th | dose dependent | no | NA | NA |
| 172 | 123.81 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 201 | 123.88 | temperature | 25 | 4320 | > th | dose independent | rect. | 16 | 8 |
| 244 | 123.98 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 275 | 124.04 | temperature | 20 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 284 | 124.07 | wind | 5 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 292 | 124.08 | temperature | 20 | 4320 | > th | dose dependent | rect. | 16 | 9 |
| 300 | 124.10 | temperature | 25 | 4320 | > th | dose dependent | sin | 18 | NA |
| 314 | 124.12 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 19 |
| 333 | 124.17 | temperature | 25 | 4320 | > th | dose dependent | rect. | 13 | 12 |
| 364 | 124.23 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 18 |
| 376 | 124.24 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 19 |
| 382 | 124.26 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 21 |
| 383 | 124.26 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 22 |
| 401 | 124.28 | wind | 5 | 43200 | > th | dose independent | rect. | 3 | 22 |
| 437 | 124.33 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 18 |
| 438 | 124.33 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 22 |
| 460 | 124.36 | wind | 5 | 43200 | < th | dose independent | rect. | 17 | 23 |
| 481 | 124.40 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 22 |
| 549 | 124.49 | wind | 7 | 43200 | < th | dose independent | sin | 16 | NA |
| 555 | 124.50 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 556 | 124.50 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 558 | 124.50 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 23 |
| 572 | 124.53 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 575 | 124.53 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 23 |
| 616 | 124.60 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 621 | 124.61 | wind | 5 | 43200 | > th | dose independent | rect. | 8 | 7 |
| 631 | 124.62 | wind | 7 | 43200 | > th | dose independent | sin | 15 | NA |
| 646 | 124.65 | wind | 7 | 43200 | < th | dose independent | rect. | 24 | 22 |
| 663 | 124.67 | temperature | 20 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 666 | 124.67 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 13 |
| 676 | 124.69 | wind | 5 | 43200 | > th | dose independent | sin | 1 | NA |
| 721 | 124.75 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 22 |
| 739 | 124.77 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 11 |
| 805 | 124.85 | wind | 5 | 43200 | > th | dose dependent | sin | 16 | NA |
| 809 | 124.86 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 852 | 124.90 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 957 | 125.01 | temperature | 25 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 967 | 125.01 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 17 |
| 968 | 125.01 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 19 |
| 986 | 125.03 | wind | 5 | 43200 | > th | dose dependent | rect. | 17 | 23 |