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Os11g0674400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.28 (0.0252) R2 : 0.00428
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0743 (0.0531) R2dN8 : 0.00552 R2N8 : 0.00428
σ : 0.475
deviance : 103.63
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.12 0.399 7.25 0.728 0.51 0.666 -0.139 -0.875 0.0815 7.21 29.64 4611 -- --
72.17 0.396 7.26 0.552 0.511 0.57 -0.143 -- 0.0892 7.19 29.45 4608 -- --
72.17 0.396 7.25 0.734 0.51 0.671 -- -0.908 0.0819 7.23 29.68 4610 -- --
72.22 0.396 7.26 0.548 0.51 0.569 -- -- 0.0896 7.24 29.47 4608 -- --
84.69 0.429 7.25 0.753 -- 0.726 -- -0.949 0.122 -- 29.4 4919 -- --
84.3 0.43 7.26 0.388 0.534 -- -0.0957 -- 0.109 7.42 -- -- -- --
84.33 0.43 7.26 0.386 0.534 -- -- -- 0.11 7.45 -- -- -- --
84.93 0.429 7.27 0.574 -- 0.634 -- -- 0.112 -- 29.26 4919 -- --
79.86 0.416 7.26 -- 0.525 0.47 -- -- 0.0649 7.19 29.4 4607 -- --
99.52 0.466 7.27 0.395 -- -- -- -- 0.118 -- -- -- -- --
88.26 0.439 7.27 -- 0.537 -- -- -- 0.0665 7.4 -- -- -- --
92.99 0.449 7.29 -- -- 0.517 -- -- 0.0364 -- 29.49 4925 -- --
103.63 0.475 7.28 -- -- -- -- -- 0.0743 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.19 wind 9.0 43200 > th dose dependent rect. 18 12
2 68.20 radiation 1.0 43200 < th dose dependent rect. 21 7
3 68.57 radiation 1.0 43200 < th dose dependent rect. 23 5
8 68.91 radiation 1.0 43200 < th dose dependent rect. 1 3
13 69.47 wind 9.0 43200 > th dose independent rect. 18 12
16 69.57 wind 7.0 43200 > th dose dependent rect. 18 3
19 69.62 temperature 20.0 10 > th dose dependent rect. 7 22
20 69.63 radiation 1.0 43200 < th dose dependent rect. 23 1
21 69.63 wind 9.0 43200 > th dose dependent rect. 18 5
22 69.67 wind 9.0 43200 > th dose independent rect. 18 4
26 69.80 wind 9.0 43200 > th dose dependent rect. 18 7
32 69.84 temperature 30.0 90 < th dose independent rect. 4 15
33 69.92 wind 9.0 43200 < th dose independent rect. 18 4
39 70.00 wind 9.0 43200 < th dose independent rect. 18 11
46 70.22 wind 9.0 43200 > th dose independent rect. 18 7
76 70.60 precipitation 0.1 43200 > th dose dependent rect. 17 1
82 70.64 wind 9.0 43200 > th dose dependent rect. 20 1
86 70.71 wind 9.0 43200 < th dose independent rect. 18 7
101 70.95 wind 9.0 43200 > th dose dependent sin 13 NA
133 71.35 precipitation 0.1 43200 > th dose independent rect. 17 1
144 71.43 temperature 30.0 720 < th dose independent rect. 19 22
149 71.48 atmosphere 995.0 43200 > th dose independent rect. 12 1
150 71.48 precipitation 0.1 43200 < th dose independent rect. 17 1
151 71.48 precipitation 0.1 43200 < th dose dependent rect. 17 1
157 71.51 wind 9.0 14400 > th dose dependent rect. 18 17
172 71.64 temperature 30.0 4320 < th dose independent rect. 5 5
186 71.68 temperature 30.0 4320 < th dose independent rect. 19 15
187 71.68 wind 9.0 14400 > th dose dependent rect. 20 15
201 71.71 temperature 30.0 4320 < th dose independent rect. 22 12
208 71.73 temperature 30.0 720 < th dose independent rect. 4 11
211 71.74 atmosphere 995.0 43200 < th dose dependent rect. 13 3
212 71.75 atmosphere 995.0 43200 < th dose independent rect. 11 4
217 71.80 temperature 30.0 4320 > th dose independent rect. 8 2
264 71.89 temperature 30.0 4320 < th dose independent rect. 19 17
277 71.92 wind 9.0 43200 > th dose independent sin 12 NA
284 71.95 temperature 30.0 4320 > th dose independent sin 6 NA
285 71.95 temperature 30.0 4320 < th dose independent sin 6 NA
289 71.96 temperature 30.0 4320 > th dose independent rect. 11 1
294 71.98 atmosphere 995.0 43200 > th dose independent rect. 9 6
299 72.01 temperature 30.0 720 < th dose independent rect. 8 9
301 72.02 atmosphere 995.0 43200 < th dose independent rect. 7 9
304 72.03 temperature 30.0 720 < th dose independent sin 3 NA
305 72.03 temperature 30.0 720 < th dose independent rect. 8 7
336 72.09 temperature 30.0 4320 < th dose independent rect. 11 1
348 72.10 temperature 30.0 4320 < th dose independent rect. 6 10
352 72.10 temperature 30.0 4320 < th dose independent rect. 19 21
353 72.10 temperature 25.0 4320 > th dose dependent rect. 7 1
355 72.11 temperature 30.0 4320 > th dose independent rect. 8 7
358 72.11 temperature 30.0 4320 < th dose independent rect. 8 8
420 72.13 wind 9.0 43200 > th dose dependent rect. 14 17
435 72.18 wind 9.0 14400 < th dose independent rect. 20 8
499 72.23 temperature 25.0 4320 > th dose dependent rect. 4 4
503 72.24 temperature 30.0 4320 > th dose dependent rect. 11 1
504 72.24 temperature 30.0 4320 > th dose dependent rect. 8 4
518 72.25 wind 1.0 43200 > th dose independent rect. 8 2
523 72.26 atmosphere 1000.0 43200 < th dose independent rect. 4 1
551 72.28 wind 9.0 43200 < th dose independent sin 13 NA
571 72.29 temperature 30.0 720 > th dose independent rect. 8 9
585 72.29 temperature 30.0 720 < th dose independent rect. 23 18
591 72.29 precipitation 0.1 43200 > th dose dependent rect. 20 1
597 72.30 precipitation 0.1 4320 > th dose independent rect. 9 9
616 72.32 precipitation 0.1 4320 < th dose independent rect. 8 10
622 72.32 precipitation 0.1 4320 < th dose dependent rect. 8 10
624 72.33 precipitation 0.1 4320 > th dose independent rect. 12 6
644 72.34 temperature 25.0 4320 > th dose independent rect. 20 1
645 72.34 temperature 25.0 4320 < th dose independent rect. 19 2
684 72.35 wind 7.0 43200 > th dose dependent rect. 14 7
689 72.36 temperature 30.0 4320 < th dose independent rect. 13 23
702 72.38 precipitation 0.1 4320 < th dose independent rect. 13 5
711 72.38 precipitation 0.1 4320 < th dose dependent rect. 13 5
715 72.39 atmosphere 1000.0 43200 < th dose independent rect. 11 1
729 72.40 wind 9.0 43200 > th dose dependent rect. 14 11
730 72.40 temperature 25.0 4320 > th dose dependent rect. 17 16
752 72.41 temperature 25.0 4320 > th dose dependent rect. 19 1
774 72.42 temperature 30.0 4320 > th dose independent rect. 13 23
779 72.43 wind 7.0 43200 > th dose independent rect. 13 19
839 72.47 precipitation 0.1 14400 > th dose independent rect. 17 6
856 72.48 precipitation 0.1 14400 > th dose dependent rect. 20 22
857 72.49 atmosphere 1000.0 43200 > th dose independent rect. 4 1
860 72.49 precipitation 0.1 14400 < th dose independent rect. 17 6
871 72.49 precipitation 0.1 14400 < th dose dependent rect. 17 6
885 72.50 atmosphere 1000.0 43200 > th dose independent rect. 23 1
886 72.50 atmosphere 1000.0 43200 < th dose independent rect. 22 1
931 72.53 temperature 30.0 4320 < th dose independent rect. 7 14
956 72.53 wind 7.0 43200 > th dose independent rect. 24 21
969 72.54 temperature 30.0 4320 < th dose independent no NA NA