Os11g0673600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os11g0673600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 317.48 | 0.837 | 5.64 | 0.531 | 1 | 1.2 | 1.56 | 3.35 | -0.419 | 14 | 25.1 | 101 | -- | -- |
| 331.3 | 0.848 | 5.58 | 1.05 | 0.958 | 0.894 | 0.555 | -- | -0.311 | 14 | 25.48 | 121 | -- | -- |
| 324.82 | 0.839 | 5.63 | 0.625 | 0.972 | 1.21 | -- | 2.96 | -0.399 | 13.8 | 24.72 | 166 | -- | -- |
| 332.3 | 0.849 | 5.57 | 1.07 | 0.953 | 0.892 | -- | -- | -0.308 | 14 | 25.4 | 124 | -- | -- |
| 358.28 | 0.882 | 5.66 | 0.462 | -- | 0.992 | -- | 3.08 | -0.452 | -- | 26.4 | 1042 | -- | -- |
| 342.68 | 0.868 | 5.62 | 0.83 | 0.783 | -- | 0.496 | -- | -0.495 | 13.9 | -- | -- | -- | -- |
| 343.63 | 0.868 | 5.62 | 0.845 | 0.783 | -- | -- | -- | -0.492 | 13.8 | -- | -- | -- | -- |
| 369.97 | 0.896 | 5.58 | 1.06 | -- | 0.823 | -- | -- | -0.327 | -- | 28.7 | 1025 | -- | -- |
| 359.04 | 0.883 | 5.62 | -- | 0.855 | 0.464 | -- | -- | -0.505 | 13.8 | 25.2 | 69 | -- | -- |
| 380.76 | 0.912 | 5.63 | 0.813 | -- | -- | -- | -- | -0.51 | -- | -- | -- | -- | -- |
| 362.47 | 0.891 | 5.64 | -- | 0.767 | -- | -- | -- | -0.586 | 13.8 | -- | -- | -- | -- |
| 389.24 | 0.919 | 5.63 | -- | -- | -1.37 | -- | -- | -0.594 | -- | 18.6 | 74 | -- | -- |
| 398.21 | 0.931 | 5.65 | -- | -- | -- | -- | -- | -0.6 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 307.31 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 2 | 307.70 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 3 | 307.85 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 4 | 307.85 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 2 |
| 9 | 309.44 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 11 | 309.85 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 12 | 310.01 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 21 | 310.89 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 7 |
| 31 | 311.80 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 36 | 311.90 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 39 | 312.04 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 44 | 312.06 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 49 | 312.32 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 55 | 312.52 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 57 | 312.60 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 58 | 312.62 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 59 | 312.66 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 63 | 312.84 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 89 | 313.41 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 107 | 313.68 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 122 | 313.89 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 155 | 314.33 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 161 | 314.45 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 165 | 314.49 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 176 | 314.64 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 202 | 315.03 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 225 | 315.15 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 232 | 315.22 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 325 | 316.21 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 326 | 316.22 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 333 | 316.27 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 8 | 23 |
| 334 | 316.29 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 341 | 316.37 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 2 |
| 357 | 316.46 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 359 | 316.48 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 366 | 316.50 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 5 |
| 378 | 316.62 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 380 | 316.62 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 384 | 316.64 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 387 | 316.67 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 11 | 19 |
| 390 | 316.69 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 414 | 316.84 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 20 | 20 |
| 420 | 316.85 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 10 |
| 438 | 316.87 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 468 | 316.99 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 474 | 317.01 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 2 |
| 484 | 317.05 | temperature | 20.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 587 | 317.33 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 7 |
| 590 | 317.33 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 603 | 317.41 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 22 | 18 |
| 612 | 317.44 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 616 | 317.48 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 619 | 317.50 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 1 | NA |
| 621 | 317.51 | temperature | 25.0 | 90 | < th | dose dependent | no | NA | NA |
| 652 | 317.60 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 667 | 317.64 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 723 | 317.81 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 744 | 317.89 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 7 |
| 748 | 317.89 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 23 |
| 756 | 317.91 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 782 | 317.96 | humidity | 60.0 | 14400 | < th | dose dependent | no | NA | NA |
| 783 | 317.96 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 6 | 16 |
| 821 | 317.97 | wind | 9.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 875 | 317.99 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 11 | 21 |
| 915 | 318.04 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 13 | 23 |
| 972 | 318.11 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 988 | 318.15 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 21 | 23 |