Os11g0672800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0672800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 124.83 | 0.525 | 11.1 | -1.12 | 1.28 | 1.89 | 0.37 | -4.25 | -1.11 | 18.6 | 25.2 | 600 | -- | -- |
| 128.02 | 0.527 | 11 | -0.511 | 1.32 | 1.53 | -0.353 | -- | -0.962 | 19 | 25.22 | 492 | -- | -- |
| 124.97 | 0.521 | 11.1 | -1.04 | 1.27 | 1.89 | -- | -3.88 | -1.07 | 18.8 | 25.46 | 573 | -- | -- |
| 128.35 | 0.528 | 11 | -0.491 | 1.32 | 1.51 | -- | -- | -0.954 | 19 | 25.2 | 507 | -- | -- |
| 174.99 | 0.616 | 11.1 | -1.53 | -- | 3.14 | -- | -5.49 | -1.3 | -- | 24.9 | 522 | -- | -- |
| 169.56 | 0.61 | 11 | -0.214 | 2 | -- | 0.387 | -- | -0.843 | 18.7 | -- | -- | -- | -- |
| 169.94 | 0.61 | 11 | -0.22 | 2 | -- | -- | -- | -0.842 | 18.7 | -- | -- | -- | -- |
| 186.76 | 0.636 | 11 | -0.725 | -- | 2.57 | -- | -- | -1.08 | -- | 24.83 | 504 | -- | -- |
| 134.47 | 0.54 | 11 | -- | 1.37 | 1.4 | -- | -- | -0.898 | 18.9 | 25.24 | 488 | -- | -- |
| 378.88 | 0.91 | 11 | -0.266 | -- | -- | -- | -- | -0.882 | -- | -- | -- | -- | -- |
| 171.21 | 0.612 | 11 | -- | 2 | -- | -- | -- | -0.818 | 18.7 | -- | -- | -- | -- |
| 199.69 | 0.658 | 11 | -- | -- | 2.47 | -- | -- | -0.989 | -- | 24.9 | 492 | -- | -- |
| 380.74 | 0.911 | 11 | -- | -- | -- | -- | -- | -0.852 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.52 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 14 | 22 |
| 5 | 125.11 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 1 | 20 |
| 8 | 125.13 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 6 | 15 |
| 38 | 125.66 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 73 | 126.03 | temperature | 25.0 | 720 | > th | dose dependent | sin | 0 | NA |
| 97 | 126.14 | temperature | 25.0 | 720 | > th | dose dependent | no | NA | NA |
| 181 | 128.99 | temperature | 25.0 | 270 | > th | dose dependent | sin | 17 | NA |
| 185 | 129.08 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 235 | 130.34 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 9 | 9 |
| 284 | 131.40 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 15 |
| 302 | 131.77 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 9 | 3 |
| 328 | 132.25 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 10 | 1 |
| 354 | 132.48 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 405 | 132.94 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 14 | 9 |
| 424 | 133.02 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 449 | 133.14 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 464 | 133.23 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 13 | 15 |
| 466 | 133.24 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 468 | 133.25 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 475 | 133.28 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 476 | 133.29 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 486 | 133.35 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 501 | 133.40 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 518 | 133.43 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 23 |
| 531 | 133.45 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 562 | 133.53 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 572 | 133.57 | temperature | 30.0 | 270 | < th | dose independent | rect. | 10 | 14 |
| 640 | 134.15 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 651 | 134.21 | wind | 9.0 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 652 | 134.21 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 659 | 134.23 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 14 | 4 |
| 698 | 134.48 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 706 | 134.50 | wind | 9.0 | 43200 | < th | dose independent | rect. | 8 | 7 |
| 710 | 134.53 | temperature | 30.0 | 720 | < th | dose independent | rect. | 2 | 14 |
| 712 | 134.54 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 713 | 134.55 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 714 | 134.55 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 19 |
| 716 | 134.56 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 717 | 134.56 | temperature | 30.0 | 720 | < th | dose independent | rect. | 4 | 12 |
| 721 | 134.60 | temperature | 30.0 | 720 | > th | dose independent | rect. | 14 | 22 |
| 742 | 134.74 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 23 |
| 745 | 134.76 | wind | 9.0 | 43200 | < th | dose independent | rect. | 2 | 13 |
| 750 | 134.78 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 762 | 134.85 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 805 | 135.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 1 | 19 |
| 812 | 135.13 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 8 | 4 |
| 817 | 135.14 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 10 | 13 |
| 821 | 135.16 | wind | 9.0 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 822 | 135.16 | temperature | 30.0 | 720 | < th | dose independent | rect. | 8 | 8 |
| 825 | 135.16 | temperature | 30.0 | 720 | < th | dose independent | rect. | 2 | 21 |
| 828 | 135.18 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 833 | 135.20 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 847 | 135.25 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 854 | 135.27 | temperature | 30.0 | 720 | < th | dose independent | rect. | 4 | 15 |
| 879 | 135.39 | temperature | 30.0 | 720 | < th | dose independent | rect. | 2 | 23 |
| 883 | 135.41 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 890 | 135.44 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 22 |
| 900 | 135.47 | radiation | 40.0 | 720 | > th | dose independent | rect. | 14 | 21 |
| 913 | 135.51 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 1 |
| 916 | 135.52 | temperature | 30.0 | 720 | < th | dose independent | sin | 0 | NA |
| 918 | 135.52 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 933 | 135.59 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 960 | 135.74 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 972 | 135.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 19 |
| 976 | 135.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 19 |
| 983 | 135.83 | radiation | 30.0 | 720 | > th | dose dependent | rect. | 14 | 21 |
| 988 | 135.86 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 990 | 135.86 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 23 |
| 993 | 135.87 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 17 |