Os11g0672200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0672200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 289.44 | 0.799 | 7.61 | 2.8 | 1.3 | -1.81 | -0.544 | 1.7 | 1.52 | 4.41 | 19.89 | 2651 | -- | -- |
| 293.23 | 0.798 | 7.54 | 3.1 | 1.29 | -2.15 | -0.454 | -- | 1.61 | 4.27 | 19.58 | 2598 | -- | -- |
| 290.13 | 0.793 | 7.61 | 2.8 | 1.29 | -1.8 | -- | 1.75 | 1.52 | 4.35 | 19.89 | 2623 | -- | -- |
| 294.14 | 0.799 | 7.54 | 3.07 | 1.29 | -2.21 | -- | -- | 1.6 | 4.36 | 19.6 | 2598 | -- | -- |
| 379 | 0.907 | 7.61 | 2.81 | -- | -1.98 | -- | 1.6 | 1.54 | -- | 19.9 | 2615 | -- | -- |
| 380.89 | 0.915 | 7.43 | 4.19 | 1.4 | -- | -0.943 | -- | 2.09 | 4.3 | -- | -- | -- | -- |
| 383.19 | 0.917 | 7.43 | 4.19 | 1.39 | -- | -- | -- | 2.09 | 4.16 | -- | -- | -- | -- |
| 382.37 | 0.911 | 7.56 | 3.04 | -- | -2.39 | -- | -- | 1.6 | -- | 19.6 | 2575 | -- | -- |
| 339.31 | 0.858 | 7.71 | -- | 1.36 | -3.8 | -- | -- | 0.875 | 4.25 | 17.1 | 47520 | -- | -- |
| 488.22 | 1.03 | 7.44 | 4.25 | -- | -- | -- | -- | 2.13 | -- | -- | -- | -- | -- |
| 846.73 | 1.36 | 7.54 | -- | 1.47 | -- | -- | -- | 1.63 | 4.11 | -- | -- | -- | -- |
| 439.25 | 0.976 | 7.72 | -- | -- | -3.87 | -- | -- | 0.883 | -- | 17.12 | 47520 | -- | -- |
| 964.64 | 1.45 | 7.55 | -- | -- | -- | -- | -- | 1.66 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 283.85 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 15 |
| 3 | 284.10 | wind | 1 | 43200 | < th | dose dependent | rect. | 15 | 11 |
| 6 | 285.17 | wind | 1 | 43200 | < th | dose dependent | rect. | 13 | 13 |
| 8 | 285.82 | humidity | 60 | 43200 | > th | dose dependent | rect. | 4 | 7 |
| 9 | 286.32 | humidity | 60 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 10 | 286.32 | humidity | 70 | 43200 | < th | dose dependent | rect. | 22 | 12 |
| 12 | 286.45 | humidity | 60 | 43200 | < th | dose independent | sin | 8 | NA |
| 13 | 286.48 | humidity | 70 | 43200 | < th | dose dependent | rect. | 18 | 16 |
| 19 | 286.92 | humidity | 60 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 20 | 286.93 | humidity | 60 | 43200 | > th | dose independent | sin | 9 | NA |
| 29 | 287.27 | wind | 1 | 43200 | < th | dose dependent | sin | 17 | NA |
| 36 | 287.47 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 22 |
| 43 | 287.53 | wind | 1 | 43200 | < th | dose independent | rect. | 16 | 10 |
| 55 | 287.87 | humidity | 70 | 43200 | < th | dose dependent | sin | 9 | NA |
| 58 | 287.87 | humidity | 60 | 43200 | < th | dose dependent | rect. | 13 | 22 |
| 60 | 287.94 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 19 |
| 63 | 287.97 | wind | 1 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 64 | 288.02 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 80 | 288.20 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 81 | 288.21 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 87 | 288.42 | wind | 1 | 43200 | > th | dose independent | rect. | 16 | 10 |
| 119 | 288.90 | humidity | 60 | 43200 | < th | dose dependent | no | NA | NA |
| 120 | 288.90 | humidity | 60 | 43200 | < th | dose dependent | rect. | 24 | 23 |
| 124 | 288.92 | humidity | 60 | 43200 | < th | dose dependent | rect. | 2 | 23 |
| 169 | 289.14 | humidity | 60 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 196 | 289.31 | wind | 1 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 197 | 289.32 | humidity | 60 | 43200 | < th | dose dependent | sin | 3 | NA |
| 229 | 289.57 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 236 | 289.64 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 3 |
| 237 | 289.64 | temperature | 20 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 246 | 289.76 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 256 | 289.82 | humidity | 60 | 43200 | > th | dose independent | rect. | 22 | 12 |
| 272 | 289.96 | humidity | 50 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 273 | 289.97 | humidity | 60 | 43200 | > th | dose independent | rect. | 16 | 18 |
| 279 | 289.99 | temperature | 20 | 4320 | < th | dose dependent | rect. | 20 | 9 |
| 298 | 290.12 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 16 |
| 312 | 290.22 | wind | 1 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 317 | 290.25 | humidity | 60 | 43200 | > th | dose independent | rect. | 3 | 7 |
| 365 | 290.61 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 372 | 290.66 | humidity | 60 | 43200 | < th | dose independent | rect. | 16 | 18 |
| 390 | 290.80 | humidity | 60 | 43200 | < th | dose independent | rect. | 14 | 20 |
| 395 | 290.83 | temperature | 20 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 398 | 290.84 | humidity | 90 | 43200 | < th | dose dependent | rect. | 6 | 5 |
| 422 | 290.97 | humidity | 70 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 438 | 291.07 | humidity | 80 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 448 | 291.10 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 12 |
| 487 | 291.29 | humidity | 70 | 43200 | < th | dose independent | rect. | 18 | 15 |
| 530 | 291.57 | humidity | 80 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 532 | 291.57 | humidity | 70 | 43200 | < th | dose independent | rect. | 24 | 19 |
| 534 | 291.58 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 569 | 291.78 | humidity | 70 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 585 | 291.84 | humidity | 50 | 43200 | > th | dose dependent | rect. | 2 | 19 |
| 609 | 291.96 | humidity | 70 | 43200 | > th | dose independent | rect. | 1 | 18 |
| 635 | 292.10 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 20 |
| 636 | 292.10 | humidity | 50 | 43200 | > th | dose dependent | sin | 3 | NA |
| 649 | 292.15 | humidity | 60 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 655 | 292.17 | humidity | 60 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 658 | 292.17 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 1 |
| 700 | 292.30 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 711 | 292.33 | radiation | 20 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 723 | 292.36 | humidity | 90 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 738 | 292.42 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 743 | 292.43 | humidity | 70 | 43200 | < th | dose independent | rect. | 11 | 13 |
| 756 | 292.49 | humidity | 70 | 43200 | < th | dose independent | sin | 18 | NA |
| 860 | 292.84 | humidity | 70 | 43200 | < th | dose independent | rect. | 9 | 23 |
| 890 | 292.92 | humidity | 70 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 891 | 292.92 | temperature | 20 | 4320 | < th | dose dependent | sin | 12 | NA |
| 902 | 292.95 | humidity | 70 | 43200 | < th | dose independent | rect. | 16 | 7 |
| 919 | 293.00 | temperature | 20 | 4320 | < th | dose independent | sin | 15 | NA |
| 929 | 293.02 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 953 | 293.06 | humidity | 70 | 43200 | < th | dose independent | no | NA | NA |
| 960 | 293.07 | humidity | 70 | 43200 | < th | dose independent | rect. | 15 | 23 |