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Os11g0670800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.8 (0.0225) R2 : 0.00186
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0438 (0.0474) R2dN8 : 0.00241 R2N8 : 0.00186
σ : 0.424
deviance : 82.67
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
50.14 0.333 7.77 0.74 0.349 -0.455 -1.61 -0.648 0.0282 7.56 29.5 310 -- --
50.19 0.33 7.78 0.674 0.355 -0.531 -1.63 -- 0.0263 7.52 29.56 327 -- --
55.4 0.347 7.75 1.01 0.381 -0.275 -- -2.14 0.0924 9.27 28.25 449 -- --
56.92 0.351 7.77 0.595 0.355 -0.564 -- -- 0.0406 8.53 29.6 318 -- --
62.71 0.369 7.75 0.977 -- -0.165 -- -2.05 0.0893 -- 28.1 414 -- --
57.65 0.356 7.78 0.745 0.151 -- -2.01 -- 0.0277 7.19 -- -- -- --
64.48 0.376 7.78 0.713 0.283 -- -- -- 0.0373 11.3 -- -- -- --
63.44 0.371 7.78 0.646 -- -0.443 -- -- 0.0547 -- 29.85 239 -- --
66.81 0.381 7.79 -- 0.411 -0.695 -- -- -0.0267 8.3 29.69 355 -- --
69.51 0.39 7.78 0.706 -- -- -- -- 0.0345 -- -- -- -- --
77.9 0.413 7.8 -- 0.276 -- -- -- -0.0421 11.2 -- -- -- --
74.26 0.401 7.79 -- -- -0.517 -- -- -0.0121 -- 29.85 234 -- --
82.67 0.424 7.8 -- -- -- -- -- -0.0438 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.66 radiation 40.0 270 < th dose dependent rect. 7 18
4 44.94 temperature 10.0 270 > th dose dependent rect. 11 8
5 44.99 temperature 30.0 270 < th dose independent rect. 18 18
6 45.05 temperature 30.0 270 < th dose independent rect. 19 16
16 45.36 atmosphere 1000.0 270 > th dose independent rect. 19 16
20 45.39 humidity 90.0 270 < th dose independent rect. 11 8
22 45.41 temperature 30.0 270 < th dose independent rect. 8 16
28 45.48 atmosphere 1010.0 270 < th dose independent rect. 11 8
29 45.51 temperature 15.0 270 > th dose independent rect. 11 8
32 45.56 wind 9.0 270 < th dose independent rect. 11 8
35 45.65 precipitation 0.1 270 < th dose independent rect. 11 8
36 45.65 precipitation 0.1 270 < th dose dependent rect. 11 8
43 45.83 wind 1.0 270 > th dose independent rect. 11 8
46 45.83 temperature 10.0 270 > th dose independent rect. 19 16
48 45.83 temperature 10.0 90 > th dose dependent rect. 13 8
52 45.85 precipitation 0.1 270 < th dose independent rect. 19 16
53 45.85 precipitation 0.1 270 < th dose dependent rect. 19 16
59 45.91 humidity 50.0 270 > th dose independent rect. 19 16
60 45.94 wind 9.0 270 < th dose independent rect. 19 16
62 45.95 atmosphere 1015.0 270 < th dose independent rect. 19 16
65 45.98 temperature 15.0 90 > th dose independent rect. 3 16
67 45.99 radiation 20.0 270 < th dose independent rect. 7 18
69 46.09 humidity 70.0 270 > th dose independent rect. 8 17
76 46.16 humidity 50.0 30 > th dose dependent rect. 9 18
88 46.26 temperature 10.0 10 > th dose dependent rect. 21 6
99 46.29 radiation 1.0 1440 < th dose dependent rect. 20 8
101 46.30 temperature 10.0 1440 > th dose independent rect. 20 8
104 46.30 temperature 30.0 1440 < th dose independent rect. 20 8
108 46.30 humidity 50.0 1440 > th dose independent rect. 20 8
114 46.30 atmosphere 995.0 1440 > th dose independent rect. 20 8
115 46.30 radiation 1.0 1440 < th dose independent rect. 20 8
135 46.30 temperature 10.0 1440 > th dose independent rect. 4 16
142 46.30 atmosphere 1015.0 90 < th dose dependent rect. 3 16
149 46.32 wind 9.0 10 < th dose dependent rect. 20 7
152 46.35 radiation 1.0 270 > th dose independent rect. 11 19
157 46.38 radiation 40.0 43200 < th dose dependent rect. 20 8
159 46.39 wind 9.0 90 < th dose independent rect. 3 16
182 46.44 temperature 10.0 30 > th dose dependent rect. 3 18
188 46.48 radiation 40.0 270 < th dose independent rect. 19 16
192 46.50 wind 9.0 10 < th dose independent rect. 3 17
196 46.50 atmosphere 1015.0 10 < th dose dependent rect. 3 17
203 46.53 humidity 70.0 90 > th dose independent rect. 19 8
207 46.53 wind 9.0 90 < th dose dependent rect. 3 16
211 46.55 radiation 1.0 270 > th dose independent rect. 12 7
268 46.60 temperature 15.0 270 > th dose independent rect. 1 17
282 46.61 atmosphere 1015.0 270 < th dose dependent rect. 1 17
338 46.64 atmosphere 1015.0 10 < th dose independent rect. 20 7
342 46.64 atmosphere 1015.0 270 < th dose dependent rect. 12 6
400 46.75 precipitation 0.1 10 < th dose independent rect. 20 7
401 46.75 wind 1.0 270 > th dose independent rect. 19 16
403 46.75 atmosphere 1000.0 270 > th dose independent rect. 8 16
405 46.75 precipitation 0.1 10 < th dose dependent rect. 20 7
407 46.76 atmosphere 1010.0 90 < th dose independent rect. 3 16
441 46.82 wind 9.0 10 < th dose independent rect. 20 7
444 46.83 temperature 10.0 10 > th dose independent rect. 20 7
445 46.83 temperature 30.0 10 < th dose independent rect. 20 7
446 46.83 humidity 50.0 10 > th dose independent rect. 20 7
449 46.83 atmosphere 995.0 10 > th dose independent rect. 20 7
450 46.83 radiation 1.0 10 < th dose independent rect. 20 7
457 46.83 temperature 10.0 10 > th dose independent rect. 3 17
459 46.83 atmosphere 1015.0 10 < th dose independent rect. 3 17
463 46.83 radiation 1.0 10 < th dose dependent rect. 20 7
485 46.86 temperature 10.0 90 > th dose independent rect. 19 8
486 46.86 temperature 30.0 90 < th dose independent rect. 19 8
487 46.86 humidity 50.0 90 > th dose independent rect. 19 8
489 46.86 atmosphere 995.0 90 > th dose independent rect. 19 8
490 46.86 radiation 1.0 90 < th dose independent rect. 19 8
497 46.86 wind 1.0 30 > th dose independent rect. 3 17
502 46.86 radiation 1.0 90 < th dose dependent rect. 19 8
507 46.87 radiation 1.0 270 > th dose independent sin 17 NA
533 46.88 precipitation 0.1 90 < th dose independent rect. 3 16
538 46.88 precipitation 0.1 90 < th dose dependent rect. 3 16
580 46.96 wind 7.0 270 < th dose independent rect. 1 17
583 46.96 temperature 10.0 270 > th dose dependent rect. 1 17
587 46.97 radiation 1.0 270 > th dose dependent sin 14 NA
669 47.05 atmosphere 1015.0 90 < th dose dependent rect. 13 8
686 47.08 atmosphere 995.0 270 > th dose independent rect. 11 8
783 47.23 atmosphere 995.0 90 > th dose independent rect. 3 16
800 47.26 temperature 10.0 270 > th dose independent rect. 24 8
802 47.26 temperature 30.0 270 < th dose independent rect. 24 8
805 47.26 humidity 50.0 270 > th dose independent rect. 24 8
808 47.26 atmosphere 995.0 270 > th dose independent rect. 24 8
816 47.26 temperature 10.0 270 > th dose independent rect. 8 16
831 47.27 wind 9.0 270 < th dose independent rect. 24 8
833 47.27 atmosphere 1015.0 270 < th dose independent rect. 24 8
852 47.30 wind 1.0 90 > th dose independent rect. 19 8
869 47.31 radiation 1.0 270 > th dose dependent rect. 13 19
880 47.34 precipitation 0.1 270 < th dose independent rect. 24 8
884 47.34 atmosphere 995.0 10 > th dose independent rect. 3 17
886 47.34 humidity 50.0 30 > th dose dependent rect. 19 8
887 47.34 precipitation 0.1 270 < th dose dependent rect. 24 8
905 47.38 humidity 90.0 270 < th dose dependent rect. 11 7
914 47.39 radiation 1.0 270 < th dose independent rect. 17 8
925 47.40 precipitation 0.1 270 < th dose independent rect. 8 16
930 47.40 precipitation 0.1 270 < th dose dependent rect. 8 16
935 47.41 wind 1.0 270 > th dose independent rect. 8 16
937 47.41 precipitation 0.1 270 < th dose independent rect. 1 17
940 47.41 wind 9.0 270 < th dose dependent rect. 1 17
941 47.41 precipitation 0.1 270 < th dose dependent rect. 1 17
981 47.45 radiation 40.0 270 < th dose independent rect. 24 8