Os11g0670100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0670100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 358.1 | 0.889 | 3.56 | 0.236 | 0.341 | -1.38 | 0.601 | -1.17 | 0.727 | 19.9 | 25.3 | 867 | -- | -- |
| 359.68 | 0.883 | 3.58 | 0.0279 | 0.341 | -1.28 | 0.808 | -- | 0.676 | 20 | 25.64 | 876 | -- | -- |
| 359.05 | 0.883 | 3.55 | 0.275 | 0.317 | -1.38 | -- | -1.36 | 0.735 | 19.9 | 25.4 | 827 | -- | -- |
| 361.67 | 0.886 | 3.58 | 0.011 | 0.339 | -1.28 | -- | -- | 0.677 | 19.9 | 25.86 | 882 | -- | -- |
| 363.4 | 0.888 | 3.55 | 0.267 | -- | -1.52 | -- | -1.55 | 0.704 | -- | 26 | 689 | -- | -- |
| 383.64 | 0.918 | 3.52 | 0.405 | 0.499 | -- | 0.75 | -- | 0.959 | 20.9 | -- | -- | -- | -- |
| 385.56 | 0.92 | 3.52 | 0.379 | 0.496 | -- | -- | -- | 0.958 | 21 | -- | -- | -- | -- |
| 366.2 | 0.891 | 3.58 | -0.0168 | -- | -1.4 | -- | -- | 0.654 | -- | 27.86 | 696 | -- | -- |
| 361.67 | 0.886 | 3.58 | -- | 0.338 | -1.28 | -- | -- | 0.675 | 19.9 | 25.86 | 882 | -- | -- |
| 399.69 | 0.934 | 3.51 | 0.379 | -- | -- | -- | -- | 0.955 | -- | -- | -- | -- | -- |
| 389.34 | 0.923 | 3.53 | -- | 0.495 | -- | -- | -- | 0.916 | 21.1 | -- | -- | -- | -- |
| 366.21 | 0.891 | 3.58 | -- | -- | -1.4 | -- | -- | 0.657 | -- | 27.87 | 696 | -- | -- |
| 403.48 | 0.938 | 3.52 | -- | -- | -- | -- | -- | 0.913 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 348.78 | temperature | 25 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 11 | 353.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 12 | 353.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 24 | 353.61 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 4 |
| 26 | 353.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 4 |
| 27 | 353.63 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 75 | 354.15 | wind | 3 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 99 | 354.42 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 131 | 354.62 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 296 | 355.82 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 11 |
| 301 | 355.85 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 15 |
| 334 | 356.01 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 346 | 356.05 | temperature | 25 | 1440 | < th | dose dependent | sin | 10 | NA |
| 347 | 356.05 | wind | 1 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 363 | 356.13 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 403 | 356.37 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 11 |
| 408 | 356.38 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 417 | 356.44 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 13 |
| 476 | 356.77 | wind | 1 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 501 | 356.86 | wind | 1 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 532 | 356.99 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 536 | 357.00 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 541 | 357.02 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 580 | 357.22 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 3 |
| 640 | 357.52 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 669 | 357.62 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 671 | 357.62 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 693 | 357.69 | wind | 1 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 703 | 357.73 | temperature | 25 | 720 | < th | dose dependent | rect. | 2 | 22 |
| 715 | 357.80 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 751 | 357.93 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 765 | 357.98 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 7 |
| 812 | 358.11 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 7 |
| 826 | 358.17 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 860 | 358.27 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 7 |
| 866 | 358.29 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 2 |
| 917 | 358.39 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 925 | 358.41 | temperature | 25 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 933 | 358.44 | temperature | 25 | 1440 | < th | dose independent | rect. | 17 | 10 |
| 943 | 358.45 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 961 | 358.49 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 20 |
| 963 | 358.50 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 973 | 358.52 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |