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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0668200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.03 (0.0425) R2 : 0.0218
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.285 (0.0895) R2dN8 : 0.0282 R2N8 : 0.0218
σ : 0.801
deviance : 294.21
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
278.8 0.785 3.09 0.00326 0.237 -0.155 1.87 -2.9 -0.336 5.78 3.597 409 -- --
287.2 0.795 3.03 0.0615 0.332 -0.458 0.967 -- -0.315 4.94 2.653 600 -- --
284.61 0.786 3.06 0.0539 0.304 -0.225 -- -1.82 -0.325 6.55 3.378 477 -- --
288.95 0.797 3.03 0.0642 0.373 -0.429 -- -- -0.315 5.61 3.378 477 -- --
286.6 0.788 3.08 0.0149 -- 0.0587 -- -2.28 -0.297 -- 3.283 924 -- --
290.96 0.8 3.03 -0.0384 0.144 -- 0.888 -- -0.289 4.94 -- -- -- --
292.3 0.801 3.03 -0.0385 0.188 -- -- -- -0.293 7.21 -- -- -- --
292.77 0.8 3.04 0.00716 -- -0.266 -- -- -0.301 -- 1.9 644 -- --
289.05 0.796 3.04 -- 0.365 -0.409 -- -- -0.321 5.64 3.378 477 -- --
294.17 0.801 3.04 -0.0351 -- -- -- -- -0.289 -- -- -- -- --
292.33 0.8 3.03 -- 0.188 -- -- -- -0.288 7.23 -- -- -- --
292.77 0.8 3.04 -- -- -0.264 -- -- -0.302 -- 1.9 654 -- --
294.21 0.801 3.03 -- -- -- -- -- -0.285 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 273.40 wind 1.0 90 < th dose independent rect. 16 1
2 273.40 wind 1.0 90 < th dose dependent rect. 16 1
6 274.28 wind 3.0 270 > th dose dependent rect. 2 6
10 274.55 wind 5.0 270 > th dose independent rect. 2 6
11 274.97 radiation 30.0 90 < th dose independent rect. 16 18
12 275.05 wind 1.0 720 > th dose dependent rect. 23 1
13 275.21 radiation 30.0 10 < th dose independent rect. 17 17
14 275.28 atmosphere 1005.0 30 < th dose dependent rect. 18 1
16 275.39 atmosphere 1005.0 90 < th dose dependent rect. 16 1
29 275.71 atmosphere 1005.0 90 < th dose independent rect. 4 2
41 275.78 precipitation 0.1 720 > th dose independent rect. 22 1
42 275.78 precipitation 0.1 720 > th dose dependent rect. 22 1
44 275.80 wind 9.0 90 < th dose dependent rect. 19 10
46 275.89 temperature 30.0 90 < th dose dependent rect. 5 6
49 276.01 atmosphere 1005.0 90 < th dose independent rect. 16 2
53 276.12 wind 3.0 270 > th dose independent rect. 2 3
55 276.12 temperature 25.0 270 < th dose dependent rect. 2 7
57 276.17 radiation 1.0 30 > th dose independent rect. 17 17
58 276.22 atmosphere 1005.0 10 < th dose independent rect. 17 1
63 276.29 radiation 20.0 4320 < th dose independent rect. 20 10
65 276.33 temperature 10.0 1440 > th dose independent rect. 20 10
68 276.33 temperature 30.0 1440 < th dose independent rect. 20 10
72 276.33 humidity 50.0 1440 > th dose independent rect. 20 10
78 276.33 atmosphere 995.0 1440 > th dose independent rect. 20 10
88 276.33 temperature 10.0 1440 > th dose independent rect. 6 14
116 276.77 humidity 50.0 14400 > th dose independent rect. 6 3
128 276.98 wind 7.0 720 > th dose dependent rect. 19 3
137 277.06 temperature 25.0 270 < th dose dependent rect. 5 1
138 277.07 radiation 30.0 90 < th dose independent rect. 5 5
145 277.29 wind 3.0 720 > th dose independent rect. 23 1
150 277.31 wind 5.0 90 < th dose dependent rect. 21 8
155 277.37 temperature 20.0 270 < th dose independent rect. 3 18
161 277.46 temperature 20.0 270 > th dose independent rect. 24 13
173 277.61 wind 3.0 90 < th dose dependent rect. 9 20
174 277.62 temperature 20.0 270 < th dose independent rect. 3 16
175 277.62 wind 3.0 720 < th dose dependent rect. 22 5
185 277.69 temperature 20.0 90 > th dose dependent sin 7 NA
189 277.70 temperature 20.0 10 > th dose dependent sin 7 NA
193 277.72 temperature 10.0 1440 > th dose independent rect. 22 8
196 277.72 temperature 30.0 1440 < th dose independent rect. 22 8
200 277.72 humidity 50.0 1440 > th dose independent rect. 22 8
207 277.72 atmosphere 995.0 1440 > th dose independent rect. 22 8
208 277.72 radiation 20.0 1440 < th dose independent rect. 22 8
217 277.72 temperature 10.0 1440 > th dose independent rect. 6 16
220 277.72 wind 7.0 720 < th dose dependent rect. 22 7
221 277.73 wind 5.0 10 > th dose independent rect. 24 8
257 277.83 wind 9.0 720 < th dose dependent rect. 17 12
266 277.90 wind 3.0 720 < th dose dependent rect. 23 2
267 277.90 humidity 50.0 90 > th dose dependent rect. 18 11
275 277.96 temperature 25.0 270 < th dose dependent sin 7 NA
276 277.99 wind 1.0 10 > th dose independent rect. 17 17
291 278.08 precipitation 0.1 270 < th dose independent rect. 6 23
292 278.08 wind 5.0 10 > th dose dependent rect. 24 8
293 278.08 precipitation 0.1 270 < th dose dependent rect. 6 23
296 278.11 wind 1.0 90 > th dose independent rect. 16 17
300 278.15 precipitation 0.1 270 < th dose independent rect. 18 10
302 278.15 precipitation 0.1 270 < th dose dependent rect. 18 10
304 278.18 wind 7.0 720 > th dose independent rect. 19 3
306 278.19 humidity 70.0 90 > th dose independent rect. 5 5
312 278.23 wind 3.0 720 < th dose independent rect. 22 7
314 278.24 temperature 20.0 10 > th dose independent rect. 17 1
328 278.30 radiation 1.0 30 > th dose independent rect. 17 15
337 278.37 temperature 10.0 1440 > th dose independent rect. 6 6
340 278.37 atmosphere 995.0 1440 > th dose independent rect. 6 6
341 278.37 temperature 10.0 1440 > th dose independent rect. 12 18
356 278.47 humidity 50.0 4320 > th dose independent rect. 6 5
375 278.53 precipitation 0.1 720 > th dose dependent rect. 18 9
389 278.57 wind 3.0 90 < th dose dependent rect. 14 15
401 278.63 temperature 20.0 270 > th dose independent sin 3 NA
404 278.64 wind 1.0 720 > th dose dependent rect. 22 6
407 278.66 temperature 15.0 1440 > th dose independent rect. 6 3
419 278.70 temperature 20.0 270 < th dose independent rect. 24 21
429 278.74 wind 9.0 1440 < th dose independent rect. 6 3
433 278.74 humidity 50.0 1440 > th dose independent rect. 6 3
435 278.74 atmosphere 995.0 1440 > th dose independent rect. 6 3
436 278.74 atmosphere 1015.0 1440 < th dose independent rect. 6 3
438 278.74 temperature 10.0 1440 > th dose independent rect. 9 21
443 278.74 wind 1.0 720 > th dose dependent rect. 19 13
450 278.76 wind 5.0 270 < th dose dependent rect. 15 2
454 278.78 wind 3.0 720 > th dose independent rect. 19 13
466 278.81 wind 9.0 90 < th dose dependent rect. 9 20
472 278.85 precipitation 0.1 720 > th dose independent rect. 18 9
478 278.87 humidity 60.0 270 > th dose independent rect. 8 21
479 278.87 wind 5.0 270 < th dose dependent rect. 14 4
482 278.87 wind 1.0 720 > th dose dependent rect. 19 9
491 278.88 wind 9.0 90 < th dose dependent rect. 11 18
494 278.90 wind 3.0 720 > th dose independent rect. 22 7
500 278.92 radiation 1.0 90 > th dose dependent rect. 17 1
505 278.93 temperature 20.0 270 < th dose independent rect. 4 1
530 278.95 temperature 20.0 270 < th dose independent sin 3 NA
534 278.95 radiation 1.0 270 < th dose dependent rect. 5 2
548 278.98 wind 1.0 270 > th dose independent rect. 4 2
577 279.04 humidity 90.0 10 < th dose independent rect. 17 1
578 279.04 wind 5.0 30 > th dose independent rect. 24 6
586 279.06 temperature 20.0 270 < th dose independent rect. 3 4
587 279.06 wind 3.0 720 > th dose independent rect. 20 9
589 279.06 wind 1.0 10 > th dose independent rect. 17 15
624 279.12 wind 5.0 30 > th dose dependent rect. 24 6
627 279.12 wind 3.0 270 < th dose dependent rect. 6 23
632 279.14 temperature 20.0 90 > th dose dependent rect. 16 19
635 279.15 precipitation 0.1 720 > th dose independent rect. 18 6
639 279.15 humidity 50.0 90 > th dose independent rect. 18 23
641 279.16 radiation 1.0 30 > th dose independent rect. 17 2
674 279.21 precipitation 0.1 90 > th dose independent rect. 23 2
675 279.21 wind 5.0 30 > th dose independent rect. 24 4
677 279.21 precipitation 0.1 90 > th dose dependent rect. 23 2
697 279.24 humidity 80.0 90 < th dose independent rect. 2 2
698 279.24 wind 3.0 270 < th dose independent rect. 18 9
704 279.25 humidity 80.0 90 < th dose dependent rect. 2 2
714 279.28 humidity 90.0 10 < th dose dependent rect. 3 1
732 279.32 radiation 1.0 270 > th dose independent rect. 14 18
738 279.33 temperature 10.0 270 > th dose dependent rect. 23 14
767 279.38 temperature 20.0 10 > th dose dependent rect. 17 17
787 279.42 atmosphere 995.0 10 > th dose independent rect. 17 17
795 279.44 wind 5.0 10 > th dose independent rect. 24 2
802 279.44 wind 5.0 10 > th dose dependent rect. 24 2
806 279.44 radiation 40.0 90 < th dose dependent rect. 5 5
816 279.46 wind 1.0 10 > th dose dependent rect. 17 17
818 279.47 wind 1.0 720 > th dose dependent sin 11 NA
833 279.49 temperature 15.0 10 > th dose dependent rect. 17 1
841 279.50 radiation 1.0 90 < th dose dependent sin 10 NA
845 279.51 temperature 20.0 90 > th dose independent rect. 17 1
849 279.51 wind 1.0 30 > th dose independent rect. 5 14
854 279.51 radiation 1.0 10 > th dose dependent rect. 17 2
893 279.55 wind 3.0 270 < th dose dependent rect. 21 20
902 279.56 wind 3.0 270 < th dose dependent rect. 13 22
909 279.58 humidity 80.0 10 < th dose independent rect. 3 1
940 279.60 temperature 20.0 270 < th dose independent rect. 24 17
944 279.61 precipitation 0.1 10 < th dose independent rect. 17 17
948 279.61 precipitation 0.1 10 < th dose dependent rect. 17 17
956 279.63 wind 1.0 10 > th dose independent rect. 5 5
972 279.66 wind 9.0 270 < th dose independent rect. 4 14
980 279.67 atmosphere 1000.0 10 > th dose independent rect. 17 1
982 279.67 humidity 60.0 90 > th dose dependent rect. 21 8
988 279.68 temperature 25.0 270 < th dose dependent rect. 1 21
989 279.69 wind 3.0 720 < th dose independent rect. 17 12
999 279.71 precipitation 0.1 720 > th dose independent rect. 21 5