Os11g0667700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os11g0667700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.02 | 0.456 | 3.54 | 0.837 | 0.127 | 0.56 | 0.578 | -0.421 | 0.194 | 21.2 | 25.7 | 12 | -- | -- |
| 94.27 | 0.452 | 3.54 | 0.786 | 0.123 | 0.613 | 0.507 | -- | 0.187 | 20.5 | 25.7 | 12 | -- | -- |
| 95.08 | 0.454 | 3.54 | 0.773 | 0.125 | 0.573 | -- | -0.167 | 0.185 | 21 | 25.7 | 12 | -- | -- |
| 95.11 | 0.454 | 3.54 | 0.752 | 0.123 | 0.59 | -- | -- | 0.18 | 20.7 | 25.71 | 12 | -- | -- |
| 95.92 | 0.459 | 3.54 | 0.773 | -- | 0.616 | -- | -0.1 | 0.189 | -- | 25.68 | 12 | -- | -- |
| 99.8 | 0.468 | 3.57 | 0.63 | 0.209 | -- | 0.384 | -- | 0.0561 | 22.9 | -- | -- | -- | -- |
| 100.39 | 0.469 | 3.57 | 0.613 | 0.207 | -- | -- | -- | 0.0542 | 23.3 | -- | -- | -- | -- |
| 95.93 | 0.458 | 3.54 | 0.758 | -- | 0.625 | -- | -- | 0.185 | -- | 25.6 | 11 | -- | -- |
| 108.69 | 0.488 | 3.58 | -- | 0.157 | 0.312 | -- | -- | 0.0441 | 22.6 | 25.71 | 12 | -- | -- |
| 103.08 | 0.474 | 3.57 | 0.619 | -- | -- | -- | -- | 0.0562 | -- | -- | -- | -- | -- |
| 110.31 | 0.491 | 3.59 | -- | 0.214 | -- | -- | -- | -0.0141 | 23.5 | -- | -- | -- | -- |
| 110.07 | 0.49 | 3.57 | -- | -- | 0.383 | -- | -- | 0.059 | -- | 27.2 | 9 | -- | -- |
| 113.18 | 0.497 | 3.58 | -- | -- | -- | -- | -- | -0.0124 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.72 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 2 | 88.72 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 3 | 89.36 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 5 | 89.77 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 6 | 89.98 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 7 | 90.03 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 9 | 90.16 | wind | 5.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 12 | 90.16 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 14 | 90.16 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 15 | 90.16 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 18 | 90.16 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 19 | 90.16 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 21 | 90.16 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 26 | 90.16 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 27 | 90.16 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 28 | 90.16 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 33 | 90.16 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 59 | 90.22 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 62 | 90.23 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 65 | 90.25 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 73 | 90.31 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 110 | 90.90 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 128 | 92.08 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 130 | 92.18 | temperature | 25.0 | 90 | < th | dose independent | rect. | 16 | 3 |
| 132 | 92.26 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 141 | 92.51 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 13 |
| 142 | 92.53 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 8 | 11 |
| 151 | 92.58 | wind | 7.0 | 43200 | < th | dose dependent | sin | 21 | NA |
| 152 | 92.58 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 156 | 92.59 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 9 | 12 |
| 167 | 92.61 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 14 | 13 |
| 174 | 92.63 | wind | 1.0 | 43200 | > th | dose dependent | sin | 20 | NA |
| 175 | 92.63 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 15 | 9 |
| 191 | 92.65 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 192 | 92.65 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 202 | 92.66 | wind | 5.0 | 43200 | < th | dose independent | rect. | 14 | 13 |
| 237 | 92.70 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 9 |
| 255 | 92.71 | wind | 5.0 | 43200 | > th | dose independent | rect. | 14 | 12 |
| 258 | 92.71 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 9 | 7 |
| 277 | 92.74 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 282 | 92.74 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 24 | 1 |
| 340 | 92.79 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 365 | 92.81 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 376 | 92.82 | wind | 3.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 383 | 92.82 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 396 | 92.84 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 398 | 92.84 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 10 |
| 438 | 92.86 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 15 | 7 |
| 450 | 92.87 | wind | 5.0 | 43200 | < th | dose independent | sin | 17 | NA |
| 454 | 92.87 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 2 |
| 476 | 92.89 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 511 | 92.91 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 14 |
| 527 | 92.92 | temperature | 25.0 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 607 | 92.96 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 13 | 15 |
| 634 | 92.98 | wind | 5.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 635 | 92.98 | wind | 5.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 638 | 92.98 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 10 |
| 648 | 92.98 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 12 |
| 670 | 93.00 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 691 | 93.01 | temperature | 30.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 692 | 93.01 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 706 | 93.02 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 751 | 93.04 | wind | 3.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 753 | 93.04 | temperature | 30.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 784 | 93.05 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 14 |
| 786 | 93.05 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 821 | 93.07 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 825 | 93.07 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 24 | 6 |
| 841 | 93.07 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 866 | 93.08 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 883 | 93.08 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 894 | 93.09 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 915 | 93.09 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 9 | 9 |
| 945 | 93.11 | wind | 5.0 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 971 | 93.12 | temperature | 30.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 974 | 93.12 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 12 | 4 |
| 988 | 93.13 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |