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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0664500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Calmodulin binding protein-like family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.23 (0.0372) R2 : 0.00188
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0726 (0.0782) R2dN8 : 0.00243 R2N8 : 0.00188
σ : 0.7
deviance : 224.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
178.37 0.628 3.22 0.276 0.406 1.74 0.187 -8.86 0.135 20.4 20 93 6.07 0.8
193.17 0.647 3.21 0.0462 0.39 3.12 0.697 -- 0.00826 20.8 19.14 65 6.7 0.884
178.48 0.622 3.22 0.272 0.406 1.74 -- -8.95 0.135 20.4 20 93 6.07 0.8
187.33 0.637 3.2 0.357 0.387 4.29 -- -- 0.181 20.2 19.2 65 6.73 1.92
187.57 0.638 3.21 0.275 -- 1.61 -- -8.89 0.128 -- 20.03 93 6.07 0.817
215.62 0.688 3.23 0.206 0.343 -- 0.751 -- 0.096 20.4 -- -- -- --
217.39 0.69 3.23 0.182 0.341 -- -- -- 0.0958 20.6 -- -- -- --
193.1 0.647 3.21 0.285 -- 5.62 -- -- 0.126 -- 19.2 67 6.62 2.09
186.78 0.637 3.23 -- 0.386 5.71 -- -- 0.0976 20.4 19.19 68 6.52 2.18
223.92 0.699 3.22 0.181 -- -- -- -- 0.0927 -- -- -- -- --
218.27 0.691 3.23 -- 0.34 -- -- -- 0.0755 20.6 -- -- -- --
195.17 0.651 3.22 -- -- 5.45 -- -- 0.0878 -- 19.17 68 6.61 2.17
224.78 0.7 3.23 -- -- -- -- -- 0.0726 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 180.06 temperature 20.0 90 < th dose independent rect. 6 1
3 183.24 temperature 20.0 90 < th dose dependent rect. 6 1
14 187.94 radiation 1.0 30 < th dose dependent rect. 7 1
49 194.33 wind 3.0 10 > th dose independent rect. 5 3
52 194.91 humidity 90.0 30 > th dose dependent rect. 6 2
63 196.17 radiation 1.0 90 < th dose independent rect. 6 1
121 200.92 wind 1.0 90 > th dose dependent rect. 4 4
123 200.98 humidity 90.0 10 > th dose independent rect. 6 2
130 201.30 humidity 90.0 30 > th dose dependent rect. 6 10
139 201.41 humidity 90.0 10 > th dose dependent rect. 6 13
145 201.51 wind 1.0 10 > th dose dependent rect. 5 3
179 202.32 temperature 20.0 270 < th dose independent rect. 4 4
218 202.94 precipitation 0.1 10 > th dose independent rect. 4 14
220 202.97 precipitation 0.1 30 > th dose independent rect. 4 10
224 202.97 precipitation 0.1 30 > th dose dependent rect. 4 10
235 203.00 precipitation 0.1 90 > th dose dependent rect. 4 3
241 203.03 precipitation 0.1 10 > th dose independent rect. 4 4
257 203.04 precipitation 0.1 90 > th dose independent rect. 4 3
274 203.05 wind 3.0 10 > th dose dependent rect. 6 1
291 203.09 precipitation 0.1 10 > th dose independent rect. 4 2
296 203.09 precipitation 0.1 10 > th dose dependent rect. 4 2
334 203.13 wind 3.0 10 > th dose independent rect. 6 1
345 203.24 wind 3.0 90 > th dose independent rect. 4 1
346 203.25 temperature 25.0 270 > th dose dependent rect. 17 17
347 203.26 wind 3.0 90 > th dose dependent rect. 5 1
411 204.23 temperature 30.0 90 < th dose independent rect. 8 23
430 204.50 atmosphere 1000.0 10 > th dose independent rect. 8 23
456 204.88 precipitation 0.1 10 > th dose independent rect. 5 19
458 204.88 precipitation 0.1 10 > th dose dependent rect. 5 19
485 205.28 precipitation 0.1 10 < th dose independent rect. 8 23
487 205.28 precipitation 0.1 10 < th dose dependent rect. 8 23
493 205.30 wind 1.0 30 > th dose independent rect. 8 23
497 205.34 wind 5.0 30 < th dose independent rect. 7 1
504 205.40 temperature 30.0 270 < th dose independent rect. 5 23
507 205.44 humidity 50.0 90 > th dose independent rect. 8 23
512 205.49 wind 1.0 90 > th dose independent rect. 7 1
513 205.49 temperature 30.0 90 < th dose dependent rect. 9 21
516 205.51 temperature 30.0 10 < th dose dependent rect. 9 21
518 205.53 atmosphere 1005.0 10 < th dose independent rect. 8 1
526 205.57 temperature 25.0 270 > th dose dependent sin 11 NA
531 205.62 temperature 30.0 90 < th dose dependent rect. 11 18
569 205.94 temperature 30.0 270 < th dose independent rect. 8 20
574 205.96 temperature 30.0 270 > th dose independent rect. 17 17
589 206.09 temperature 25.0 270 > th dose dependent rect. 19 2
600 206.18 temperature 25.0 270 > th dose dependent rect. 18 4
602 206.23 temperature 30.0 720 < th dose independent rect. 20 17
609 206.28 radiation 40.0 10 < th dose independent rect. 3 23
624 206.40 humidity 50.0 30 > th dose dependent rect. 7 1
632 206.44 atmosphere 1000.0 10 > th dose independent rect. 7 1
636 206.45 temperature 10.0 10 > th dose independent rect. 7 1
639 206.45 humidity 50.0 10 > th dose independent rect. 7 1
642 206.45 atmosphere 1015.0 10 < th dose independent rect. 7 1
643 206.45 precipitation 0.1 10 < th dose independent rect. 7 1
644 206.45 temperature 10.0 10 > th dose independent rect. 8 23
646 206.45 precipitation 0.1 10 < th dose dependent rect. 7 1
667 206.52 radiation 1.0 10 > th dose independent rect. 7 1
680 206.57 wind 9.0 1440 < th dose independent rect. 8 1
683 206.57 temperature 10.0 1440 > th dose independent rect. 8 1
688 206.57 humidity 50.0 1440 > th dose independent rect. 8 1
690 206.57 atmosphere 995.0 1440 > th dose independent rect. 8 1
693 206.57 atmosphere 1015.0 1440 < th dose independent rect. 8 1
695 206.57 temperature 10.0 1440 > th dose independent rect. 9 23
701 206.60 temperature 30.0 90 < th dose dependent rect. 13 16
741 206.75 temperature 30.0 270 > th dose independent rect. 8 1
759 206.76 temperature 30.0 270 > th dose dependent rect. 8 1
786 206.82 temperature 20.0 720 > th dose dependent rect. 15 1
793 206.87 atmosphere 995.0 10 > th dose dependent rect. 7 1
800 206.92 radiation 40.0 90 < th dose dependent rect. 6 2
808 206.96 wind 9.0 30 < th dose dependent rect. 7 1
811 206.97 atmosphere 1015.0 90 < th dose dependent rect. 6 2
817 207.00 temperature 25.0 270 > th dose independent rect. 19 1
819 207.01 radiation 40.0 10 > th dose independent rect. 9 3
841 207.03 atmosphere 1015.0 10 < th dose dependent rect. 6 3
844 207.05 temperature 25.0 270 > th dose independent rect. 18 3
845 207.05 atmosphere 1015.0 10 < th dose dependent rect. 7 1
852 207.06 temperature 25.0 270 > th dose dependent rect. 17 10
863 207.08 precipitation 0.1 10 > th dose independent sin 0 NA
868 207.09 radiation 40.0 90 < th dose independent rect. 7 1
887 207.14 humidity 50.0 270 > th dose independent rect. 5 23
893 207.17 precipitation 0.1 10 > th dose dependent sin 0 NA
901 207.20 temperature 30.0 10 < th dose dependent rect. 14 16
903 207.21 radiation 30.0 10 > th dose dependent rect. 9 3
904 207.21 temperature 15.0 270 > th dose dependent rect. 14 10
947 207.30 radiation 40.0 10 > th dose dependent sin 9 NA
951 207.32 humidity 50.0 14400 < th dose independent rect. 17 1
966 207.32 radiation 30.0 10 > th dose dependent rect. 15 21