Os11g0661600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxidase (EC 1.11.1.7).
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Os11g0661600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxidase (EC 1.11.1.7).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.21 | 0.444 | 2.83 | 0.0335 | 0.326 | 0.285 | -0.888 | -0.706 | 0.222 | 10.1 | 0.4605 | 93 | -- | -- |
| 90.02 | 0.442 | 2.83 | 0.000577 | 0.314 | 0.269 | -0.188 | -- | 0.218 | 9.98 | 0.4183 | 92 | -- | -- |
| 90.05 | 0.442 | 2.82 | -0.00647 | 0.342 | 0.301 | -- | -0.105 | 0.224 | 10.5 | 0.4192 | 96 | -- | -- |
| 90.09 | 0.442 | 2.83 | -0.0146 | 0.338 | 0.299 | -- | -- | 0.217 | 10.4 | 0.4 | 92 | -- | -- |
| 90.88 | 0.444 | 2.82 | 0.0135 | -- | 0.239 | -- | -0.212 | 0.235 | -- | 0.07248 | 633 | -- | -- |
| 90.81 | 0.447 | 2.84 | -0.033 | 0.195 | -- | -0.428 | -- | 0.192 | 5.38 | -- | -- | -- | -- |
| 91.26 | 0.447 | 2.84 | -0.0341 | 0.193 | -- | -- | -- | 0.194 | 5.22 | -- | -- | -- | -- |
| 90.89 | 0.444 | 2.84 | -0.0269 | -- | 0.244 | -- | -- | 0.206 | -- | 6.006 | 662 | -- | -- |
| 90.09 | 0.442 | 2.83 | -- | 0.332 | 0.295 | -- | -- | 0.218 | 10.4 | 0.3999 | 92 | -- | -- |
| 93.2 | 0.451 | 2.84 | -0.0274 | -- | -- | -- | -- | 0.198 | -- | -- | -- | -- | -- |
| 91.29 | 0.447 | 2.84 | -- | 0.192 | -- | -- | -- | 0.197 | 5.23 | -- | -- | -- | -- |
| 90.91 | 0.444 | 2.84 | -- | -- | 0.243 | -- | -- | 0.209 | -- | 5.231 | 661 | -- | -- |
| 93.22 | 0.451 | 2.84 | -- | -- | -- | -- | -- | 0.202 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.52 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 4 |
| 3 | 73.87 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 4 |
| 5 | 74.59 | temperature | 25.0 | 10 | > th | dose independent | rect. | 3 | 2 |
| 11 | 74.61 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 3 | 2 |
| 25 | 74.76 | humidity | 90.0 | 90 | < th | dose independent | rect. | 4 | 1 |
| 26 | 74.82 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 28 | 75.00 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 29 | 75.01 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 31 | 75.08 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 33 | 75.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 36 | 75.08 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 40 | 75.08 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 49 | 75.08 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 50 | 75.08 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 51 | 75.08 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 60 | 75.08 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 67 | 75.15 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 74 | 75.22 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 75 | 75.25 | wind | 5.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 79 | 75.27 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 81 | 75.27 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 82 | 75.27 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 86 | 75.27 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 88 | 75.27 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 93 | 75.27 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 94 | 75.27 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 100 | 75.28 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 104 | 75.30 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 105 | 75.30 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 107 | 75.31 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 112 | 75.45 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 113 | 75.47 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 118 | 75.60 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 119 | 75.60 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 157 | 76.09 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 23 |
| 158 | 76.09 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 172 | 76.59 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 4 | 1 |
| 180 | 77.18 | wind | 9.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 205 | 80.31 | humidity | 50.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 228 | 82.02 | temperature | 30.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 314 | 84.19 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 5 | 23 |
| 371 | 84.92 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 24 | 5 |
| 408 | 85.16 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 24 | 1 |
| 422 | 85.34 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 5 |
| 426 | 85.36 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 24 | 5 |
| 432 | 85.39 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 24 | 5 |
| 475 | 85.76 | wind | 1.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 499 | 86.00 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 1 | 1 |
| 547 | 86.23 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 571 | 86.33 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 616 | 86.50 | temperature | 10.0 | 720 | > th | dose independent | rect. | 17 | 8 |
| 618 | 86.50 | radiation | 30.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 620 | 86.50 | temperature | 10.0 | 720 | > th | dose independent | rect. | 1 | 16 |
| 622 | 86.52 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 645 | 86.56 | temperature | 10.0 | 720 | > th | dose independent | rect. | 5 | 8 |
| 646 | 86.56 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 5 | 8 |
| 647 | 86.56 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 5 | 8 |
| 648 | 86.56 | temperature | 10.0 | 720 | > th | dose independent | rect. | 13 | 16 |
| 661 | 86.60 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 17 | 8 |
| 663 | 86.60 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 668 | 86.61 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 684 | 86.67 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 22 | 7 |
| 707 | 86.75 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 722 | 86.79 | humidity | 50.0 | 720 | > th | dose independent | rect. | 5 | 8 |
| 723 | 86.79 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 1 | 16 |
| 732 | 86.83 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 5 | 8 |
| 734 | 86.83 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 5 | 8 |
| 735 | 86.84 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 737 | 86.84 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 746 | 86.85 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 22 | 7 |
| 762 | 86.90 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 17 | 8 |
| 781 | 86.95 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 13 | 16 |
| 809 | 87.01 | wind | 9.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 845 | 87.13 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 16 |
| 847 | 87.13 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 16 |
| 866 | 87.19 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 3 | 2 |
| 869 | 87.19 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 875 | 87.21 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 3 | 2 |
| 909 | 87.33 | wind | 9.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 930 | 87.39 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 944 | 87.43 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 955 | 87.48 | wind | 1.0 | 30 | > th | dose independent | rect. | 15 | 14 |
| 959 | 87.48 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 11 | 18 |
| 972 | 87.53 | wind | 9.0 | 720 | < th | dose independent | rect. | 5 | 8 |
| 983 | 87.56 | temperature | 25.0 | 720 | < th | dose independent | sin | 11 | NA |
| 986 | 87.56 | radiation | 20.0 | 90 | < th | dose independent | rect. | 11 | 18 |
| 992 | 87.58 | temperature | 25.0 | 720 | > th | dose independent | sin | 11 | NA |
| 995 | 87.58 | temperature | 25.0 | 10 | > th | dose independent | rect. | 11 | 19 |