Os11g0661300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ADP/ATP translocase-like protein.
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Os11g0661300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ADP/ATP translocase-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.1 | 0.391 | 10.2 | -0.452 | 1.07 | 1.48 | 0.783 | -0.13 | -0.296 | 9.72 | 25.09 | 264 | -- | -- |
| 69.12 | 0.387 | 10.2 | -0.473 | 1.08 | 1.49 | 0.791 | -- | -0.3 | 9.73 | 25.04 | 255 | -- | -- |
| 71.4 | 0.394 | 10.2 | -0.41 | 1.07 | 1.47 | -- | -0.219 | -0.293 | 9.71 | 25.06 | 255 | -- | -- |
| 71.46 | 0.394 | 10.2 | -0.443 | 1.08 | 1.49 | -- | -- | -0.302 | 9.71 | 25 | 253 | -- | -- |
| 116.11 | 0.502 | 10.2 | -0.25 | -- | 1.76 | -- | -0.89 | -0.244 | -- | 29.97 | 627 | -- | -- |
| 101.5 | 0.472 | 10.3 | -0.853 | 1.11 | -- | 0.802 | -- | -0.599 | 8.99 | -- | -- | -- | -- |
| 103.71 | 0.477 | 10.3 | -0.825 | 1.1 | -- | -- | -- | -0.599 | 8.96 | -- | -- | -- | -- |
| 115.74 | 0.501 | 10.2 | -0.333 | -- | 1.85 | -- | -- | -0.218 | -- | 29.27 | 626 | -- | -- |
| 76.08 | 0.406 | 10.2 | -- | 1.07 | 1.67 | -- | -- | -0.22 | 9.81 | 25 | 257 | -- | -- |
| 173.56 | 0.616 | 10.3 | -0.826 | -- | -- | -- | -- | -0.592 | -- | -- | -- | -- | -- |
| 121.67 | 0.516 | 10.2 | -- | 1.1 | -- | -- | -- | -0.507 | 9.01 | -- | -- | -- | -- |
| 118.32 | 0.507 | 10.2 | -- | -- | 1.96 | -- | -- | -0.153 | -- | 28.8 | 629 | -- | -- |
| 191.56 | 0.646 | 10.3 | -- | -- | -- | -- | -- | -0.5 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.09 | temperature | 25 | 270 | < th | dose dependent | rect. | 14 | 20 |
| 46 | 69.14 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 58 | 69.50 | temperature | 25 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 71 | 69.91 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 77 | 70.16 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 80 | 70.18 | temperature | 20 | 270 | > th | dose independent | rect. | 6 | 22 |
| 83 | 70.20 | temperature | 25 | 270 | < th | dose dependent | sin | 12 | NA |
| 107 | 70.61 | temperature | 25 | 720 | < th | dose dependent | sin | 17 | NA |
| 146 | 71.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 12 |
| 148 | 71.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 15 | 10 |
| 175 | 71.49 | temperature | 20 | 270 | > th | dose independent | rect. | 18 | 10 |
| 195 | 71.74 | temperature | 20 | 270 | < th | dose independent | sin | 13 | NA |
| 217 | 72.03 | temperature | 20 | 270 | > th | dose independent | sin | 13 | NA |
| 229 | 72.13 | temperature | 20 | 270 | < th | dose independent | rect. | 15 | 18 |
| 239 | 72.23 | temperature | 20 | 270 | < th | dose independent | rect. | 11 | 20 |
| 292 | 72.54 | temperature | 20 | 270 | > th | dose independent | rect. | 17 | 23 |
| 293 | 72.54 | temperature | 15 | 270 | > th | dose dependent | sin | 10 | NA |
| 345 | 72.81 | temperature | 20 | 10 | < th | dose independent | sin | 11 | NA |
| 362 | 72.90 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 20 |
| 399 | 73.12 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 17 |
| 455 | 73.31 | temperature | 20 | 10 | > th | dose independent | rect. | 12 | 17 |
| 499 | 73.46 | temperature | 20 | 720 | < th | dose independent | rect. | 11 | 15 |
| 577 | 73.72 | temperature | 20 | 270 | < th | dose independent | rect. | 6 | 23 |
| 580 | 73.73 | temperature | 20 | 720 | > th | dose independent | sin | 17 | NA |
| 628 | 73.90 | temperature | 20 | 270 | > th | dose independent | no | NA | NA |
| 656 | 73.96 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 672 | 74.00 | temperature | 20 | 270 | < th | dose independent | rect. | 4 | 23 |
| 699 | 74.08 | temperature | 20 | 270 | < th | dose independent | no | NA | NA |
| 705 | 74.10 | temperature | 20 | 720 | < th | dose independent | sin | 17 | NA |
| 966 | 74.74 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 23 |