Os11g0661200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0661200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.12 | 0.282 | 9.15 | 0.404 | 0.647 | 1.6 | -0.359 | 0.861 | 0.053 | 5.59 | 5.674 | 1990 | -- | -- |
| 36.94 | 0.283 | 9.15 | 0.269 | 0.648 | 1.51 | -0.293 | -- | 0.042 | 5.52 | 15.8 | 1948 | -- | -- |
| 36.43 | 0.281 | 9.14 | 0.41 | 0.645 | 1.6 | -- | 0.899 | 0.0564 | 5.64 | 5.076 | 2000 | -- | -- |
| 37.08 | 0.284 | 9.17 | 0.22 | 0.645 | 1.53 | -- | -- | 0.00743 | 5.59 | 15.98 | 1999 | -- | -- |
| 48.57 | 0.325 | 9.15 | 0.381 | -- | 1.53 | -- | 0.926 | 0.0652 | -- | 10.01 | 2712 | -- | -- |
| 80.8 | 0.421 | 9.11 | 0.744 | 0.566 | -- | -0.435 | -- | 0.304 | 4.89 | -- | -- | -- | -- |
| 81.28 | 0.422 | 9.11 | 0.745 | 0.563 | -- | -- | -- | 0.307 | 4.88 | -- | -- | -- | -- |
| 49.35 | 0.327 | 9.18 | 0.163 | -- | 1.46 | -- | -- | 0.00895 | -- | 16.23 | 2703 | -- | -- |
| 38.04 | 0.287 | 9.18 | -- | 0.651 | 1.68 | -- | -- | -0.0346 | 5.72 | 14.74 | 2029 | -- | -- |
| 97.98 | 0.463 | 9.11 | 0.766 | -- | -- | -- | -- | 0.321 | -- | -- | -- | -- | -- |
| 95.92 | 0.458 | 9.12 | -- | 0.576 | -- | -- | -- | 0.224 | 4.83 | -- | -- | -- | -- |
| 49.87 | 0.329 | 9.19 | -- | -- | 1.59 | -- | -- | -0.0226 | -- | 11.45 | 2709 | -- | -- |
| 113.46 | 0.497 | 9.13 | -- | -- | -- | -- | -- | 0.236 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.39 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 13 |
| 5 | 36.46 | temperature | 10 | 1440 | > th | dose dependent | sin | 4 | NA |
| 13 | 36.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 20 |
| 27 | 36.59 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 22 |
| 91 | 36.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 105 | 36.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 109 | 36.78 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 22 |
| 137 | 36.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 141 | 36.82 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 224 | 36.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 240 | 36.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 2 |
| 241 | 36.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 4 |
| 578 | 37.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 18 |
| 760 | 38.06 | temperature | 10 | 1440 | > th | dose dependent | sin | 16 | NA |
| 802 | 38.15 | temperature | 30 | 1440 | < th | dose dependent | sin | 6 | NA |
| 985 | 38.50 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 12 |