Os11g0661000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein prenyltransferase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0661000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein prenyltransferase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.32 | 0.196 | 8.96 | 1.03 | 0.367 | -0.411 | -0.202 | 2.41 | 0.182 | 15.5 | 20.92 | 1750 | -- | -- |
| 21.34 | 0.215 | 9.04 | 0.63 | 0.251 | -0.433 | -0.254 | -- | 0.113 | 15.5 | 15.77 | 22820 | -- | -- |
| 17.44 | 0.195 | 8.96 | 1.02 | 0.368 | -0.413 | -- | 2.42 | 0.181 | 15.6 | 21 | 1763 | -- | -- |
| 20.36 | 0.21 | 9.01 | 0.669 | 0.339 | -0.508 | -- | -- | 0.112 | 15.4 | 11.88 | 22716 | -- | -- |
| 23.81 | 0.227 | 8.96 | 0.921 | -- | -0.423 | -- | 1.95 | 0.15 | -- | 19.04 | 2553 | -- | -- |
| 23.97 | 0.23 | 9.06 | 0.226 | 0.348 | -- | -0.188 | -- | -0.076 | 15.2 | -- | -- | -- | -- |
| 24.08 | 0.23 | 9.06 | 0.222 | 0.348 | -- | -- | -- | -0.077 | 15.3 | -- | -- | -- | -- |
| 26.52 | 0.24 | 9.01 | 0.678 | -- | -0.55 | -- | -- | 0.121 | -- | 8.858 | 22754 | -- | -- |
| 24.45 | 0.23 | 9.05 | -- | 0.334 | -0.197 | -- | -- | -0.0605 | 15.3 | 11.33 | 7195 | -- | -- |
| 30.94 | 0.26 | 9.06 | 0.207 | -- | -- | -- | -- | -0.0861 | -- | -- | -- | -- | -- |
| 25.38 | 0.236 | 9.06 | -- | 0.344 | -- | -- | -- | -0.102 | 15.3 | -- | -- | -- | -- |
| 30.5 | 0.257 | 9.05 | -- | -- | -0.258 | -- | -- | -0.0713 | -- | 10.03 | 4016 | -- | -- |
| 32.07 | 0.264 | 9.06 | -- | -- | -- | -- | -- | -0.109 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.37 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 10 |
| 2 | 15.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 13 |
| 6 | 15.50 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 23 | 15.83 | temperature | 20 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 42 | 16.02 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 54 | 16.11 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 67 | 16.20 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 4 |
| 82 | 16.29 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 117 | 16.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 230 | 16.85 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 11 |
| 238 | 16.87 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 9 |
| 255 | 16.94 | temperature | 25 | 720 | < th | dose dependent | sin | 5 | NA |
| 265 | 16.98 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 11 |
| 276 | 17.00 | temperature | 20 | 270 | > th | dose dependent | sin | 0 | NA |
| 382 | 17.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 15 |
| 384 | 17.23 | temperature | 20 | 720 | < th | dose independent | sin | 5 | NA |
| 390 | 17.23 | radiation | 20 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 401 | 17.25 | temperature | 25 | 270 | < th | dose independent | rect. | 6 | 8 |
| 427 | 17.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 435 | 17.30 | temperature | 25 | 720 | < th | dose dependent | rect. | 23 | 12 |
| 441 | 17.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 469 | 17.34 | radiation | 20 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 483 | 17.36 | temperature | 20 | 720 | > th | dose independent | sin | 5 | NA |
| 485 | 17.36 | temperature | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 500 | 17.37 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 15 |
| 548 | 17.43 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 12 |
| 567 | 17.45 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 13 |
| 570 | 17.45 | humidity | 90 | 14400 | > th | dose dependent | sin | 7 | NA |
| 583 | 17.46 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 623 | 17.48 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 11 |
| 646 | 17.49 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 14 |
| 695 | 17.52 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 5 |
| 712 | 17.53 | temperature | 25 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 717 | 17.53 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 788 | 17.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 14 |
| 841 | 17.60 | temperature | 20 | 1440 | > th | dose dependent | sin | 14 | NA |
| 924 | 17.65 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 926 | 17.65 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 964 | 17.67 | temperature | 25 | 4320 | < th | dose independent | rect. | 11 | 2 |
| 984 | 17.68 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 13 |