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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0660700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 4.57 (0.0374) R2 : 0.507
β1 : -2.77 (0.14) R2dD : 0.481 R2D : 0.187
β2 : 0.839 (0.104) R2dC : 0.0858 R2C : -0.0822
β3 : -1.6 (0.17) R2dE : 0.14 R2E : -0.22
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.16 (0.0865) R2dN8 : 0.315 R2N8 : -0.0232
σ : 0.684
deviance : 215.83
__
_____
C
peak time of C : 4.58
E
wheather : temperature
threshold : 27.6
memory length : 11
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
213.76 0.687 4.58 -2.88 0.67 -1.47 -0.815 0.888 -1.14 5.03 25.2 11 -- --
215.06 0.683 4.56 -2.76 0.686 -1.55 -0.577 -- -1.12 5.02 25.2 11 -- --
214.28 0.682 4.57 -2.95 0.77 -1.45 -- 1.03 -1.14 4.7 27.7 11 -- --
215.83 0.684 4.57 -2.77 0.839 -1.6 -- -- -1.16 4.58 27.6 11 -- --
234.1 0.713 4.56 -2.74 -- -1.4 -- 0.534 -1.01 -- 23.78 7 -- --
250.3 0.742 4.49 -2.37 0.539 -- -0.876 -- -0.801 6.78 -- -- -- --
252.25 0.744 4.49 -2.38 0.536 -- -- -- -0.799 6.74 -- -- -- --
234.29 0.713 4.55 -2.68 -- -1.49 -- -- -1 -- 23.5 6 -- --
397.57 0.929 4.45 -- 0.521 -0.569 -- -- -0.632 6.21 25.27 6 -- --
267.28 0.764 4.5 -2.37 -- -- -- -- -0.788 -- -- -- -- --
402.05 0.938 4.43 -- 0.509 -- -- -- -0.533 7.01 -- -- -- --
409.9 0.946 4.45 -- -- -0.657 -- -- -0.587 -- 22.5 10 -- --
415.67 0.952 4.44 -- -- -- -- -- -0.525 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 198.01 wind 9.0 43200 > th dose dependent rect. 17 4
2 198.60 wind 9.0 43200 > th dose dependent rect. 17 6
5 199.24 wind 7.0 43200 > th dose independent rect. 18 3
6 199.27 wind 7.0 43200 > th dose independent rect. 20 1
7 199.73 wind 7.0 43200 < th dose independent rect. 20 1
9 199.94 wind 7.0 43200 < th dose independent rect. 18 3
11 200.18 wind 9.0 43200 > th dose dependent rect. 17 8
39 202.86 wind 9.0 43200 > th dose independent rect. 18 9
49 203.15 wind 9.0 43200 < th dose independent rect. 18 9
96 205.21 atmosphere 1000.0 43200 < th dose dependent rect. 4 1
139 206.71 atmosphere 1000.0 43200 < th dose independent rect. 3 1
154 206.91 precipitation 0.1 43200 > th dose dependent rect. 20 2
157 206.93 atmosphere 1000.0 43200 > th dose independent rect. 3 1
164 207.05 radiation 1.0 43200 < th dose dependent rect. 23 3
165 207.05 radiation 1.0 43200 < th dose dependent rect. 23 5
178 207.26 radiation 1.0 43200 < th dose dependent rect. 23 1
282 208.53 atmosphere 1005.0 43200 < th dose dependent sin 8 NA
334 208.83 atmosphere 1005.0 43200 < th dose dependent rect. 23 17
357 208.92 atmosphere 995.0 43200 > th dose independent rect. 15 10
367 208.95 atmosphere 1005.0 43200 < th dose dependent rect. 15 16
396 209.02 atmosphere 1005.0 43200 < th dose dependent rect. 11 20
404 209.04 atmosphere 995.0 43200 < th dose independent rect. 15 10
462 209.17 atmosphere 995.0 43200 < th dose dependent rect. 15 8
526 209.29 atmosphere 1005.0 43200 < th dose dependent no NA NA
539 209.33 atmosphere 995.0 43200 > th dose independent rect. 16 6
572 209.44 atmosphere 1005.0 43200 < th dose dependent rect. 4 23
587 209.52 atmosphere 1005.0 43200 < th dose dependent rect. 15 1
593 209.55 atmosphere 995.0 43200 < th dose independent rect. 16 6
617 209.61 atmosphere 995.0 43200 < th dose dependent rect. 16 6
651 209.77 temperature 15.0 30 > th dose dependent rect. 3 23
685 209.90 atmosphere 1005.0 43200 < th dose dependent rect. 11 6
785 210.22 temperature 30.0 30 < th dose dependent rect. 5 23
811 210.28 wind 7.0 43200 < th dose independent rect. 15 12
972 210.88 atmosphere 995.0 43200 < th dose dependent rect. 15 1
995 210.98 atmosphere 1005.0 43200 < th dose dependent rect. 18 1