Os11g0660400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Plasma membrane H+-ATPase (EC 3.6.1.3).
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Os11g0660400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Plasma membrane H+-ATPase (EC 3.6.1.3).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.16 | 0.376 | 8.63 | -0.114 | 0.427 | -0.681 | 0.361 | -1.57 | 0.217 | 3.68 | 22.03 | 1769 | -- | -- |
| 70.13 | 0.39 | 8.66 | -0.528 | 0.389 | -0.61 | 0.514 | -- | 0.122 | 3.67 | 22.5 | 1980 | -- | -- |
| 64.35 | 0.374 | 8.64 | -0.106 | 0.424 | -0.644 | -- | -1.5 | 0.211 | 3.68 | 22.2 | 1760 | -- | -- |
| 69.69 | 0.389 | 8.69 | -0.593 | 0.427 | -0.609 | -- | -- | 0.0891 | 3.83 | 22.4 | 1870 | -- | -- |
| 74.17 | 0.401 | 8.64 | -0.0621 | -- | -0.621 | -- | -1.48 | 0.221 | -- | 22.4 | 1962 | -- | -- |
| 84.64 | 0.431 | 8.64 | -0.356 | 0.422 | -- | 0.26 | -- | 0.309 | 3.63 | -- | -- | -- | -- |
| 84.84 | 0.431 | 8.64 | -0.36 | 0.424 | -- | -- | -- | 0.307 | 3.64 | -- | -- | -- | -- |
| 74.07 | 0.401 | 8.71 | -0.602 | -- | -0.765 | -- | -- | 0.0344 | -- | 24.7 | 1168 | -- | -- |
| 77.89 | 0.413 | 8.66 | -- | 0.509 | -0.401 | -- | -- | 0.233 | 2.87 | 22.4 | 1870 | -- | -- |
| 94.81 | 0.455 | 8.64 | -0.342 | -- | -- | -- | -- | 0.319 | -- | -- | -- | -- | -- |
| 88.26 | 0.439 | 8.63 | -- | 0.417 | -- | -- | -- | 0.347 | 3.65 | -- | -- | -- | -- |
| 82.86 | 0.424 | 8.68 | -- | -- | -0.643 | -- | -- | 0.143 | -- | 24.7 | 1168 | -- | -- |
| 97.9 | 0.462 | 8.63 | -- | -- | -- | -- | -- | 0.357 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.18 | temperature | 25 | 270 | < th | dose dependent | rect. | 9 | 21 |
| 30 | 64.55 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 35 | 64.60 | temperature | 25 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 40 | 64.67 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 42 | 64.70 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 53 | 64.82 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 56 | 64.86 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 59 | 64.87 | temperature | 25 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 60 | 64.87 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 63 | 64.88 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 82 | 65.12 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 91 | 65.26 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 143 | 65.89 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 15 |
| 201 | 66.32 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 210 | 66.37 | temperature | 25 | 720 | < th | dose dependent | sin | 19 | NA |
| 235 | 66.63 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 249 | 66.75 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 275 | 66.98 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 297 | 67.14 | temperature | 25 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 311 | 67.24 | humidity | 90 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 317 | 67.27 | humidity | 80 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 323 | 67.32 | humidity | 60 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 355 | 67.47 | temperature | 25 | 270 | < th | dose dependent | sin | 12 | NA |
| 359 | 67.50 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 366 | 67.52 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 385 | 67.66 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 397 | 67.69 | wind | 3 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 400 | 67.70 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 428 | 67.84 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 430 | 67.86 | humidity | 60 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 440 | 67.92 | humidity | 80 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 472 | 68.08 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 510 | 68.24 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 521 | 68.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 525 | 68.28 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 4 |
| 545 | 68.37 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 14 |
| 560 | 68.41 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 566 | 68.43 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 572 | 68.44 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 584 | 68.46 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 602 | 68.50 | temperature | 20 | 1440 | < th | dose independent | rect. | 4 | 1 |
| 660 | 68.63 | humidity | 50 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 662 | 68.63 | humidity | 60 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 692 | 68.68 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 695 | 68.69 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 703 | 68.71 | wind | 3 | 14400 | < th | dose dependent | sin | 10 | NA |
| 723 | 68.76 | temperature | 25 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 758 | 68.80 | temperature | 10 | 270 | > th | dose dependent | sin | 11 | NA |
| 789 | 68.85 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |
| 861 | 68.96 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 875 | 68.98 | temperature | 25 | 1440 | > th | dose independent | rect. | 11 | 6 |
| 954 | 69.11 | humidity | 50 | 14400 | > th | dose independent | rect. | 9 | 7 |
| 957 | 69.11 | humidity | 50 | 14400 | > th | dose independent | rect. | 20 | 20 |
| 961 | 69.12 | humidity | 60 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 990 | 69.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 991 | 69.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 998 | 69.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 22 |