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Os11g0655600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.54 (0.0284) R2 : 0.075
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.364 (0.0598) R2dN8 : 0.0968 R2N8 : 0.075
σ : 0.535
deviance : 131.49
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
100.98 0.472 5.55 1.02 0.311 0.989 0.538 -0.168 0.32 2.13 50.44 4225 -- --
101 0.468 5.55 1.01 0.308 0.938 0.539 -- 0.324 2.12 50.21 4223 -- --
102.04 0.47 5.55 1.01 0.311 0.97 -- -0.177 0.32 2.24 50 4237 -- --
102.07 0.471 5.55 0.987 0.309 0.914 -- -- 0.323 2.28 50 4237 -- --
107.6 0.483 5.55 0.971 -- 0.818 -- 0.0882 0.339 -- 50.26 4288 -- --
116.43 0.506 5.53 0.638 0.253 -- 0.38 -- 0.431 2.44 -- -- -- --
116.95 0.506 5.53 0.628 0.255 -- -- -- 0.428 2.57 -- -- -- --
107.61 0.483 5.55 0.978 -- 0.846 -- -- 0.337 -- 50.4 4289 -- --
115.13 0.5 5.55 -- 0.243 0.896 -- -- 0.287 2.38 64.01 6230 -- --
120.74 0.513 5.53 0.638 -- -- -- -- 0.435 -- -- -- -- --
127.33 0.528 5.54 -- 0.267 -- -- -- 0.358 2.6 -- -- -- --
112.24 0.493 5.6 -- -- 0.83 -- -- 0.228 -- 55 24988 -- --
131.49 0.535 5.54 -- -- -- -- -- 0.364 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 94.56 temperature 15.0 270 > th dose independent rect. 18 8
3 96.32 atmosphere 1010.0 270 < th dose independent rect. 19 7
6 96.76 atmosphere 1010.0 30 < th dose independent rect. 20 6
14 97.90 temperature 15.0 30 > th dose independent rect. 20 6
15 97.99 temperature 15.0 10 > th dose independent rect. 9 17
22 98.39 temperature 15.0 270 > th dose independent rect. 8 17
27 98.59 temperature 10.0 270 > th dose dependent rect. 19 7
30 98.65 temperature 15.0 270 > th dose independent rect. 19 18
37 99.31 atmosphere 1015.0 270 < th dose independent rect. 20 17
44 99.57 temperature 15.0 1440 > th dose independent rect. 9 8
45 99.59 atmosphere 1010.0 10 < th dose independent rect. 20 9
49 99.73 atmosphere 1015.0 270 < th dose independent rect. 8 17
51 99.77 humidity 50.0 4320 > th dose independent rect. 14 20
53 99.78 humidity 50.0 4320 > th dose independent rect. 14 15
54 99.80 humidity 50.0 4320 > th dose independent rect. 14 4
56 99.81 humidity 50.0 4320 > th dose independent rect. 14 13
58 99.81 atmosphere 1010.0 30 < th dose independent rect. 9 17
61 99.83 humidity 50.0 4320 > th dose independent rect. 14 9
72 99.92 temperature 15.0 10 > th dose independent rect. 20 9
75 99.96 humidity 50.0 4320 > th dose independent sin 14 NA
79 99.99 wind 9.0 43200 > th dose independent rect. 10 4
86 100.07 wind 9.0 43200 < th dose independent rect. 10 4
87 100.11 temperature 15.0 270 > th dose independent rect. 17 22
89 100.12 humidity 50.0 4320 < th dose dependent sin 11 NA
90 100.13 humidity 50.0 4320 < th dose independent rect. 15 20
93 100.29 humidity 50.0 4320 > th dose independent rect. 15 1
103 100.37 humidity 50.0 4320 < th dose independent sin 13 NA
127 100.55 humidity 50.0 4320 < th dose independent rect. 14 4
143 100.55 temperature 10.0 30 > th dose dependent rect. 20 6
146 100.58 precipitation 0.1 270 < th dose independent rect. 14 16
148 100.58 precipitation 0.1 270 < th dose dependent rect. 14 16
150 100.63 temperature 15.0 10 > th dose independent rect. 20 20
166 100.74 humidity 60.0 270 > th dose independent rect. 18 8
167 100.74 temperature 15.0 270 > th dose independent rect. 2 16
169 100.76 humidity 50.0 4320 > th dose independent rect. 11 6
174 100.80 radiation 1.0 270 < th dose independent rect. 18 8
179 100.83 temperature 30.0 270 < th dose independent rect. 18 8
180 100.84 humidity 50.0 4320 < th dose independent rect. 15 2
183 100.85 radiation 1.0 270 < th dose dependent rect. 18 8
185 100.86 humidity 50.0 4320 > th dose independent rect. 11 16
189 100.88 humidity 50.0 4320 > th dose independent rect. 11 18
190 100.88 wind 1.0 14400 > th dose dependent rect. 3 3
200 100.91 temperature 10.0 270 > th dose dependent rect. 19 18
208 100.93 atmosphere 995.0 270 > th dose independent rect. 18 8
209 100.93 radiation 20.0 270 < th dose independent rect. 18 8
215 100.93 atmosphere 1015.0 270 < th dose independent rect. 2 16
227 100.94 humidity 50.0 4320 > th dose independent rect. 15 23
237 100.97 humidity 50.0 270 > th dose independent rect. 6 8
243 100.98 precipitation 0.1 14400 < th dose independent rect. 5 5
244 100.98 wind 9.0 270 < th dose independent rect. 18 8
247 100.98 precipitation 0.1 14400 < th dose dependent rect. 5 5
250 100.99 temperature 10.0 270 > th dose independent rect. 6 8
251 100.99 atmosphere 995.0 270 > th dose independent rect. 6 8
252 100.99 atmosphere 1015.0 270 < th dose independent rect. 6 8
253 100.99 temperature 10.0 270 > th dose independent rect. 14 16
254 101.00 wind 9.0 43200 > th dose independent rect. 11 1
261 101.02 humidity 50.0 4320 > th dose independent rect. 21 20
264 101.02 humidity 60.0 1440 > th dose dependent rect. 9 2
265 101.02 wind 7.0 14400 < th dose dependent rect. 3 3
269 101.03 precipitation 0.1 270 < th dose independent rect. 2 16
273 101.03 precipitation 0.1 270 < th dose dependent rect. 2 16
288 101.05 precipitation 0.1 14400 < th dose independent rect. 5 11
290 101.05 humidity 60.0 1440 > th dose dependent rect. 8 4
291 101.05 precipitation 0.1 14400 < th dose dependent rect. 5 11
292 101.06 wind 9.0 270 < th dose independent rect. 6 8
297 101.06 wind 1.0 14400 > th dose dependent rect. 24 6
309 101.09 atmosphere 1015.0 270 < th dose dependent rect. 19 7
312 101.10 precipitation 0.1 270 < th dose independent rect. 6 8
316 101.10 precipitation 0.1 270 < th dose dependent rect. 6 8
317 101.11 wind 3.0 14400 < th dose independent rect. 4 1
318 101.11 precipitation 0.1 14400 > th dose independent rect. 5 11
329 101.13 humidity 50.0 4320 > th dose independent rect. 4 13
359 101.19 wind 9.0 270 < th dose independent rect. 14 16
369 101.21 wind 1.0 270 > th dose independent rect. 13 7
376 101.22 wind 9.0 270 < th dose independent rect. 2 16
415 101.26 humidity 50.0 4320 > th dose independent no NA NA
432 101.27 humidity 50.0 4320 > th dose independent rect. 24 23
448 101.28 humidity 50.0 4320 > th dose independent rect. 2 23
459 101.29 wind 5.0 14400 < th dose dependent rect. 4 1
472 101.30 wind 9.0 14400 < th dose dependent rect. 24 6
506 101.34 precipitation 0.1 14400 > th dose dependent rect. 5 5
525 101.38 humidity 90.0 1440 < th dose dependent rect. 9 2
527 101.39 radiation 1.0 10 > th dose independent rect. 8 8
528 101.39 wind 9.0 14400 < th dose independent rect. 20 17
532 101.40 wind 3.0 14400 > th dose independent rect. 4 1
539 101.43 humidity 60.0 4320 < th dose dependent sin 14 NA
563 101.47 precipitation 0.1 14400 > th dose independent rect. 5 5
594 101.52 wind 7.0 43200 > th dose dependent rect. 11 2
608 101.54 humidity 60.0 4320 < th dose dependent rect. 15 20
613 101.56 wind 3.0 14400 > th dose independent rect. 3 3
622 101.57 humidity 90.0 1440 < th dose dependent rect. 8 4
632 101.60 atmosphere 1015.0 30 < th dose dependent rect. 20 6
633 101.61 wind 9.0 43200 > th dose independent rect. 4 10
634 101.61 wind 7.0 43200 > th dose dependent rect. 10 4
635 101.61 atmosphere 995.0 90 > th dose dependent rect. 15 17
674 101.66 wind 9.0 43200 > th dose independent rect. 4 12
682 101.69 wind 3.0 14400 < th dose independent rect. 24 6
690 101.71 humidity 60.0 4320 < th dose dependent rect. 14 6
704 101.72 wind 9.0 43200 > th dose independent rect. 1 13
708 101.73 wind 3.0 14400 > th dose independent rect. 24 6
710 101.73 wind 9.0 43200 < th dose independent rect. 4 10
718 101.75 wind 9.0 43200 > th dose independent rect. 1 15
727 101.76 humidity 90.0 14400 < th dose dependent rect. 3 1
764 101.84 wind 1.0 270 > th dose independent rect. 14 16
776 101.84 wind 1.0 14400 > th dose dependent rect. 24 13
795 101.88 wind 9.0 14400 > th dose independent rect. 20 17
801 101.89 wind 9.0 43200 > th dose independent rect. 21 19
805 101.91 temperature 20.0 14400 < th dose independent rect. 20 1
814 101.93 precipitation 0.1 270 < th dose independent rect. 18 8
815 101.93 precipitation 0.1 270 < th dose dependent rect. 18 8
821 101.94 wind 9.0 14400 < th dose dependent rect. 24 13
827 101.95 atmosphere 995.0 10 > th dose dependent rect. 16 16
831 101.97 temperature 10.0 43200 > th dose independent rect. 10 7
843 101.98 radiation 40.0 270 < th dose independent rect. 14 16
853 102.00 wind 9.0 43200 > th dose dependent rect. 10 6
862 102.03 humidity 90.0 14400 > th dose dependent rect. 9 1
865 102.04 humidity 50.0 270 > th dose independent rect. 20 17
900 102.09 humidity 60.0 4320 < th dose dependent rect. 15 2
903 102.10 humidity 70.0 1440 > th dose independent rect. 9 2
915 102.12 wind 1.0 270 > th dose independent rect. 6 8
945 102.17 precipitation 0.1 270 < th dose independent rect. 1 7
949 102.17 precipitation 0.1 270 < th dose dependent rect. 1 7
986 102.19 humidity 70.0 4320 < th dose dependent rect. 17 21
994 102.20 precipitation 0.1 14400 > th dose dependent rect. 4 9
997 102.21 humidity 90.0 14400 > th dose independent rect. 13 1
1000 102.21 precipitation 0.1 270 < th dose independent rect. 13 7