Os11g0655300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os11g0655300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 72.52 | 0.4 | 3.03 | 0.116 | 0.126 | 3 | -0.225 | 5.78 | 0.264 | 2.31 | 17 | 586 | -- | -- |
| 77.78 | 0.411 | 2.99 | 0.15 | 0.0861 | 0.518 | -0.511 | -- | 0.282 | 0.526 | 18.63 | 781 | -- | -- |
| 72.67 | 0.397 | 3.03 | 0.124 | 0.126 | 3.11 | -- | 6.07 | 0.265 | 2.85 | 16.9 | 601 | -- | -- |
| 78.66 | 0.413 | 2.99 | 0.164 | 0.109 | 0.49 | -- | -- | 0.28 | 3.11 | 18.7 | 764 | -- | -- |
| 73.55 | 0.399 | 3.03 | 0.129 | -- | 3.26 | -- | 6.37 | 0.265 | -- | 16.7 | 575 | -- | -- |
| 79.36 | 0.418 | 3 | 0.0659 | 0.0725 | -- | -0.463 | -- | 0.25 | 1.44 | -- | -- | -- | -- |
| 80.06 | 0.419 | 3 | 0.0805 | 0.0953 | -- | -- | -- | 0.251 | 3.9 | -- | -- | -- | -- |
| 79.36 | 0.415 | 2.99 | 0.161 | -- | 0.441 | -- | -- | 0.282 | -- | 18.85 | 925 | -- | -- |
| 79.26 | 0.415 | 2.99 | -- | 0.117 | 0.406 | -- | -- | 0.259 | 3.22 | 18.6 | 913 | -- | -- |
| 80.55 | 0.419 | 3 | 0.0844 | -- | -- | -- | -- | 0.254 | -- | -- | -- | -- | -- |
| 80.23 | 0.419 | 3 | -- | 0.0969 | -- | -- | -- | 0.242 | 3.89 | -- | -- | -- | -- |
| 79.89 | 0.416 | 3 | -- | -- | 0.377 | -- | -- | 0.257 | -- | 18 | 696 | -- | -- |
| 80.74 | 0.419 | 3 | -- | -- | -- | -- | -- | 0.245 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 69.92 | wind | 9.0 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 2 | 71.42 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 3 | 71.49 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 4 | 71.49 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 5 | 71.50 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 7 | 71.55 | wind | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 11 | 71.57 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 12 | 71.58 | humidity | 90.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 18 | 71.60 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 21 | 71.63 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 27 | 71.66 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 29 | 71.66 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 30 | 71.66 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 34 | 71.66 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 36 | 71.66 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 41 | 71.66 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 42 | 71.66 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 43 | 71.66 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 48 | 71.66 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 50 | 71.82 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 55 | 71.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 58 | 71.93 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 62 | 71.93 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 71 | 71.93 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 72 | 71.93 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 92 | 71.93 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 96 | 71.93 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 115 | 72.02 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 121 | 72.20 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 123 | 72.24 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 170 | 72.63 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 171 | 72.68 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 173 | 72.70 | wind | 9.0 | 4320 | > th | dose independent | rect. | 3 | 1 |
| 205 | 72.70 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 240 | 72.83 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 243 | 72.97 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 244 | 72.99 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 245 | 72.99 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 248 | 73.09 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 250 | 73.12 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 256 | 73.25 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 12 | 6 |
| 259 | 73.26 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 12 | 6 |
| 270 | 73.46 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 273 | 73.49 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 274 | 73.50 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 277 | 73.50 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 19 | 1 |
| 279 | 73.51 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 7 | 8 |
| 285 | 73.57 | wind | 1.0 | 720 | < th | dose dependent | rect. | 7 | 1 |
| 289 | 73.63 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 312 | 73.83 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 315 | 73.85 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 12 | 8 |
| 338 | 74.15 | wind | 1.0 | 720 | < th | dose independent | rect. | 7 | 1 |
| 343 | 74.21 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 378 | 74.51 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 7 | 17 |
| 390 | 74.59 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 403 | 74.62 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 404 | 74.62 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 15 | 9 |
| 409 | 74.63 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 19 | 5 |
| 429 | 74.74 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 437 | 74.86 | temperature | 20.0 | 720 | < th | dose independent | rect. | 7 | 6 |
| 441 | 74.87 | temperature | 20.0 | 720 | < th | dose independent | rect. | 7 | 2 |
| 442 | 74.87 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 451 | 74.88 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 24 | 1 |
| 493 | 75.07 | wind | 3.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 500 | 75.10 | temperature | 20.0 | 1440 | < th | dose dependent | sin | 20 | NA |
| 507 | 75.15 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 555 | 75.31 | wind | 9.0 | 4320 | < th | dose independent | rect. | 24 | 5 |
| 562 | 75.36 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 564 | 75.36 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 596 | 75.50 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 24 | 18 |
| 599 | 75.51 | wind | 1.0 | 720 | > th | dose independent | rect. | 6 | 3 |
| 603 | 75.51 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 24 | 16 |
| 605 | 75.52 | temperature | 20.0 | 720 | < th | dose dependent | sin | 1 | NA |
| 618 | 75.55 | temperature | 20.0 | 720 | > th | dose independent | rect. | 6 | 9 |
| 624 | 75.56 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 24 | 10 |
| 702 | 75.72 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 6 | 22 |
| 703 | 75.73 | wind | 9.0 | 4320 | < th | dose independent | rect. | 23 | 10 |
| 761 | 75.80 | wind | 1.0 | 30 | < th | dose independent | rect. | 24 | 3 |
| 786 | 75.84 | wind | 9.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 805 | 75.86 | temperature | 20.0 | 720 | < th | dose dependent | no | NA | NA |
| 822 | 75.87 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 16 | 22 |
| 825 | 75.87 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 10 | 23 |
| 843 | 75.88 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 12 | 21 |
| 862 | 75.89 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 15 | 19 |
| 919 | 75.94 | wind | 1.0 | 10 | < th | dose independent | rect. | 22 | 1 |
| 922 | 75.94 | wind | 1.0 | 10 | < th | dose dependent | rect. | 22 | 1 |
| 930 | 75.95 | wind | 1.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 938 | 75.96 | wind | 1.0 | 270 | < th | dose dependent | rect. | 7 | 12 |
| 940 | 75.97 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 942 | 75.97 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 23 | 7 |