Os11g0655100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0655100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.32 | 0.498 | 2.95 | 0.0487 | 0.0443 | -0.332 | -0.477 | -0.235 | 0.0774 | 12.4 | 1.065 | 7 | -- | -- |
| 112.37 | 0.494 | 2.95 | 0.0422 | 0.0435 | -0.349 | -0.502 | -- | 0.0784 | 12.5 | 1.1 | 6 | -- | -- |
| 112.66 | 0.498 | 2.94 | 0.0809 | 0.0329 | -0.2 | -- | -0.971 | 0.0814 | 11.6 | 1.1 | 5 | -- | -- |
| 113.44 | 0.496 | 2.95 | 0.0174 | 0.0532 | -0.371 | -- | -- | 0.0727 | 13.6 | 1.1 | 6 | -- | -- |
| 112.58 | 0.494 | 2.93 | 0.0797 | -- | -0.236 | -- | -0.842 | 0.11 | -- | 1.1 | 3 | -- | -- |
| 115.84 | 0.505 | 2.95 | 0.0813 | 0.0189 | -- | 0.566 | -- | 0.0668 | 0.951 | -- | -- | -- | -- |
| 116.93 | 0.506 | 2.95 | 0.0592 | 0.0725 | -- | -- | -- | 0.0625 | 5.84 | -- | -- | -- | -- |
| 113.59 | 0.496 | 2.95 | 0.0197 | -- | -0.346 | -- | -- | 0.0726 | -- | 1.092 | 6 | -- | -- |
| 113.44 | 0.496 | 2.95 | -- | 0.0534 | -0.372 | -- | -- | 0.0722 | 13.8 | 1.071 | 6 | -- | -- |
| 117.2 | 0.506 | 2.95 | 0.0614 | -- | -- | -- | -- | 0.0641 | -- | -- | -- | -- | -- |
| 117.02 | 0.506 | 2.96 | -- | 0.0734 | -- | -- | -- | 0.0559 | 5.8 | -- | -- | -- | -- |
| 113.6 | 0.496 | 2.95 | -- | -- | -0.348 | -- | -- | 0.0703 | -- | 1.066 | 6 | -- | -- |
| 117.3 | 0.506 | 2.96 | -- | -- | -- | -- | -- | 0.0573 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.07 | wind | 1.0 | 10 | < th | dose dependent | rect. | 8 | 5 |
| 3 | 100.39 | wind | 1.0 | 10 | < th | dose independent | rect. | 8 | 5 |
| 10 | 104.38 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 15 | 20 |
| 12 | 104.58 | humidity | 60.0 | 90 | < th | dose independent | rect. | 15 | 19 |
| 15 | 104.69 | humidity | 60.0 | 10 | < th | dose independent | rect. | 15 | 20 |
| 30 | 105.08 | humidity | 60.0 | 10 | > th | dose independent | sin | 11 | NA |
| 42 | 105.16 | humidity | 60.0 | 10 | < th | dose independent | sin | 11 | NA |
| 47 | 105.43 | humidity | 60.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 84 | 106.18 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 85 | 106.21 | humidity | 70.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 94 | 106.25 | humidity | 70.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 97 | 106.30 | humidity | 70.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 110 | 106.58 | humidity | 70.0 | 720 | > th | dose independent | rect. | 2 | 7 |
| 118 | 106.73 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 157 | 106.82 | humidity | 60.0 | 90 | < th | dose independent | rect. | 18 | 15 |
| 161 | 106.82 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 18 | 15 |
| 224 | 106.88 | humidity | 60.0 | 10 | < th | dose independent | rect. | 10 | 1 |
| 241 | 106.88 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 386 | 106.96 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 400 | 106.98 | radiation | 30.0 | 30 | > th | dose dependent | rect. | 15 | 19 |
| 417 | 107.12 | wind | 1.0 | 10 | < th | dose independent | sin | 20 | NA |
| 418 | 107.12 | atmosphere | 1000.0 | 30 | < th | dose dependent | rect. | 11 | 1 |
| 429 | 107.18 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 432 | 107.20 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 453 | 107.24 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 2 |
| 555 | 107.43 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 624 | 107.60 | wind | 1.0 | 10 | > th | dose independent | sin | 20 | NA |
| 674 | 107.94 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 698 | 108.06 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 722 | 108.14 | wind | 1.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 763 | 108.24 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 766 | 108.26 | wind | 1.0 | 10 | < th | dose dependent | sin | 20 | NA |
| 770 | 108.27 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 796 | 108.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 799 | 108.32 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 803 | 108.32 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 809 | 108.32 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 810 | 108.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 830 | 108.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 858 | 108.40 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 859 | 108.40 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 863 | 108.41 | temperature | 25.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 869 | 108.45 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 873 | 108.46 | wind | 3.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 874 | 108.46 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 878 | 108.47 | humidity | 80.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 879 | 108.47 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 893 | 108.50 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 897 | 108.51 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 907 | 108.53 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 909 | 108.53 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 910 | 108.53 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 914 | 108.53 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 916 | 108.53 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 921 | 108.53 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 922 | 108.53 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 923 | 108.53 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 925 | 108.53 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 931 | 108.53 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 938 | 108.55 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 948 | 108.57 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 988 | 108.66 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 989 | 108.67 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |