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Os11g0655000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.02 (0.0212) R2 : 0.25
β1 : -0.929 (0.0775) R2dD : 0.245 R2D : 0.193
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.231 (0.0452) R2dN8 : 0.0576 R2N8 : 0.00478
σ : 0.397
deviance : 72.27
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
57.87 0.357 7.02 -0.867 0.465 -0.362 0.244 0.17 -0.192 20.1 10 8 -- --
58.05 0.355 7.02 -0.867 0.465 -0.362 0.247 -- -0.192 20.1 9.992 7 -- --
58.04 0.355 7.02 -0.874 0.464 -0.363 -- 0.174 -0.194 20.1 9.999 7 -- --
58.45 0.356 7.02 -0.885 0.464 -0.363 -- -- -0.198 20.1 9.99 7 -- --
66.48 0.38 7.01 -0.924 -- -0.269 -- 0.136 -0.224 -- 19.21 10 -- --
62.4 0.37 7.02 -0.913 0.431 -- -0.0527 -- -0.219 16.7 -- -- -- --
62.41 0.37 7.02 -0.913 0.431 -- -- -- -0.22 16.7 -- -- -- --
66.48 0.38 7.01 -0.928 -- -0.269 -- -- -0.224 -- 19.2 9 -- --
79.75 0.416 7.02 -- 0.415 -0.361 -- -- -0.171 20 10 12 -- --
72.27 0.397 7.02 -0.929 -- -- -- -- -0.231 -- -- -- -- --
84.38 0.43 7 -- 0.448 -- -- -- -0.118 16.7 -- -- -- --
89.23 0.44 6.99 -- -- -0.257 -- -- -0.121 -- 19.46 9 -- --
95.05 0.455 6.99 -- -- -- -- -- -0.128 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 47.53 precipitation 0.1 10 < th dose independent rect. 9 17
2 47.53 precipitation 0.1 10 < th dose dependent rect. 9 17
3 47.64 wind 7.0 10 < th dose independent rect. 2 7
4 47.64 wind 9.0 10 < th dose independent rect. 9 17
6 47.72 temperature 10.0 10 > th dose independent rect. 2 7
8 47.72 temperature 30.0 10 < th dose independent rect. 2 7
9 47.72 humidity 50.0 10 > th dose independent rect. 2 7
11 47.72 atmosphere 995.0 10 > th dose independent rect. 2 7
12 47.72 atmosphere 1015.0 10 < th dose independent rect. 2 7
13 47.72 temperature 10.0 10 > th dose independent rect. 9 17
18 47.90 precipitation 0.1 10 < th dose independent rect. 2 7
19 47.90 precipitation 0.1 10 < th dose dependent rect. 2 7
29 47.95 humidity 50.0 30 > th dose independent rect. 9 17
32 48.06 temperature 10.0 1440 > th dose independent rect. 3 7
35 48.06 atmosphere 995.0 1440 > th dose independent rect. 3 7
36 48.06 temperature 10.0 1440 > th dose independent rect. 10 17
39 48.14 atmosphere 995.0 10 > th dose independent rect. 9 17
40 48.21 radiation 40.0 30 < th dose independent rect. 2 7
46 48.40 wind 9.0 10 < th dose dependent rect. 2 7
48 48.49 temperature 10.0 10 > th dose dependent rect. 2 7
49 48.49 atmosphere 995.0 10 > th dose dependent rect. 2 7
51 48.63 humidity 50.0 270 > th dose independent rect. 7 17
52 48.63 atmosphere 995.0 10 > th dose dependent rect. 9 6
53 48.64 atmosphere 995.0 90 > th dose dependent rect. 8 7
78 49.05 wind 1.0 10 > th dose independent rect. 9 17
96 49.17 wind 9.0 4320 < th dose independent rect. 3 6
99 49.17 radiation 40.0 90 < th dose independent rect. 13 19
102 49.18 wind 9.0 270 < th dose independent rect. 6 7
108 49.24 humidity 50.0 270 > th dose independent rect. 6 7
111 49.26 atmosphere 995.0 270 > th dose independent rect. 13 17
118 49.31 temperature 10.0 270 > th dose independent rect. 6 7
119 49.31 atmosphere 995.0 270 > th dose independent rect. 6 7
120 49.31 atmosphere 1015.0 270 < th dose independent rect. 6 7
121 49.31 precipitation 0.1 270 < th dose independent rect. 6 7
122 49.31 temperature 10.0 270 > th dose independent rect. 13 17
123 49.31 precipitation 0.1 270 < th dose dependent rect. 6 7
125 49.33 atmosphere 995.0 270 > th dose dependent rect. 6 7
134 49.34 atmosphere 995.0 90 > th dose independent rect. 8 7
139 49.35 wind 1.0 10 > th dose independent rect. 9 6
154 49.36 humidity 50.0 1440 > th dose independent rect. 3 6
157 49.36 wind 9.0 90 < th dose independent rect. 8 7
163 49.37 wind 1.0 90 > th dose independent rect. 8 7
164 49.38 precipitation 0.1 90 < th dose independent rect. 8 7
166 49.38 precipitation 0.1 90 < th dose dependent rect. 8 7
171 49.40 temperature 10.0 90 > th dose independent rect. 8 7
172 49.40 atmosphere 1015.0 90 < th dose independent rect. 8 7
173 49.40 temperature 10.0 90 > th dose independent rect. 15 17
185 49.44 wind 9.0 10 < th dose independent rect. 9 6
188 49.48 temperature 10.0 10 > th dose independent rect. 9 6
190 49.48 atmosphere 995.0 10 > th dose independent rect. 9 6
191 49.48 atmosphere 1015.0 10 < th dose independent rect. 9 6
193 49.48 precipitation 0.1 10 < th dose independent rect. 9 6
195 49.48 temperature 10.0 10 > th dose independent rect. 15 18
196 49.48 precipitation 0.1 10 < th dose dependent rect. 9 6
250 49.63 wind 9.0 270 < th dose independent rect. 13 17
282 49.69 temperature 10.0 1440 > th dose independent rect. 9 7
285 49.69 temperature 10.0 1440 > th dose independent rect. 16 17
291 49.71 wind 9.0 10 < th dose independent rect. 15 18
300 49.73 atmosphere 1015.0 10 < th dose independent rect. 15 18
302 49.74 humidity 50.0 90 > th dose independent rect. 8 7
309 49.77 precipitation 0.1 270 < th dose independent rect. 13 17
311 49.77 precipitation 0.1 270 < th dose dependent rect. 13 17
315 49.79 radiation 1.0 10 > th dose independent rect. 9 6
318 49.80 atmosphere 1005.0 90 > th dose independent rect. 8 7
319 49.80 radiation 40.0 270 < th dose dependent rect. 24 7
331 49.85 atmosphere 995.0 90 > th dose independent rect. 15 17
340 49.89 wind 9.0 270 < th dose independent rect. 19 16
345 49.91 radiation 40.0 10 < th dose independent rect. 15 18
355 49.92 atmosphere 995.0 270 > th dose dependent rect. 9 1
357 49.93 temperature 10.0 270 > th dose independent rect. 11 8
358 49.93 atmosphere 1015.0 270 < th dose independent rect. 11 8
360 49.93 temperature 10.0 270 > th dose independent rect. 19 16
361 49.93 atmosphere 995.0 270 > th dose independent rect. 19 16
369 49.95 atmosphere 995.0 270 > th dose independent rect. 11 8
394 50.02 atmosphere 995.0 10 > th dose independent rect. 15 18
397 50.03 humidity 50.0 270 > th dose independent rect. 19 16
398 50.04 humidity 50.0 10 > th dose independent rect. 9 6
406 50.06 atmosphere 995.0 270 > th dose dependent rect. 8 3
412 50.09 precipitation 0.1 90 < th dose independent rect. 15 17
414 50.09 precipitation 0.1 90 < th dose dependent rect. 15 17
421 50.12 precipitation 0.1 270 < th dose independent rect. 11 8
426 50.12 precipitation 0.1 270 < th dose independent rect. 19 16
429 50.12 precipitation 0.1 270 < th dose dependent rect. 11 8
430 50.12 precipitation 0.1 270 < th dose dependent rect. 19 16
433 50.13 atmosphere 1015.0 10 < th dose independent rect. 9 17
459 50.19 radiation 1.0 270 > th dose independent rect. 6 7
483 50.20 atmosphere 1015.0 270 < th dose independent rect. 13 17
495 50.23 precipitation 0.1 10 < th dose independent rect. 15 18
496 50.23 precipitation 0.1 10 < th dose dependent rect. 15 18
505 50.25 atmosphere 995.0 10 > th dose dependent rect. 9 17
529 50.29 humidity 50.0 30 > th dose dependent rect. 2 7
551 50.34 atmosphere 995.0 270 > th dose independent rect. 1 17
555 50.35 wind 1.0 270 > th dose independent rect. 9 1
556 50.35 atmosphere 1005.0 270 > th dose independent rect. 8 3
574 50.38 humidity 60.0 270 > th dose independent rect. 18 7
575 50.38 wind 1.0 270 > th dose independent rect. 11 8
578 50.41 wind 9.0 270 < th dose independent rect. 18 7
587 50.43 temperature 10.0 270 > th dose independent rect. 18 7
589 50.43 radiation 20.0 270 < th dose independent rect. 18 7
592 50.43 temperature 10.0 270 > th dose independent rect. 1 17
593 50.43 atmosphere 1015.0 270 < th dose independent rect. 1 17
599 50.44 radiation 40.0 270 < th dose dependent rect. 18 7
601 50.45 wind 9.0 270 < th dose independent rect. 9 1
602 50.45 precipitation 0.1 270 < th dose independent rect. 9 1
609 50.45 wind 1.0 270 > th dose independent rect. 24 7
612 50.45 precipitation 0.1 270 < th dose dependent rect. 9 1
614 50.45 radiation 20.0 270 < th dose dependent rect. 18 7
616 50.45 wind 9.0 10 < th dose dependent rect. 15 18
617 50.46 temperature 10.0 270 > th dose independent rect. 9 1
618 50.46 atmosphere 995.0 270 > th dose independent rect. 9 1
619 50.46 atmosphere 1015.0 270 < th dose independent rect. 9 1
623 50.46 temperature 10.0 270 > th dose independent rect. 10 23
626 50.47 temperature 10.0 10 > th dose dependent rect. 15 18
629 50.48 precipitation 0.1 270 < th dose independent rect. 18 7
630 50.48 wind 9.0 270 < th dose independent rect. 11 8
631 50.48 precipitation 0.1 270 < th dose dependent rect. 18 7
650 50.50 radiation 20.0 270 < th dose dependent rect. 17 9
651 50.50 radiation 1.0 270 < th dose dependent rect. 6 19
666 50.52 temperature 10.0 270 > th dose independent rect. 11 20
667 50.52 radiation 1.0 270 < th dose dependent rect. 11 14
676 50.54 temperature 30.0 270 < th dose independent rect. 18 7
679 50.55 humidity 50.0 270 > th dose independent rect. 9 1
681 50.55 precipitation 0.1 270 < th dose independent rect. 17 9
684 50.55 precipitation 0.1 270 < th dose dependent rect. 17 9
694 50.57 wind 9.0 270 < th dose independent rect. 17 9
698 50.57 radiation 40.0 10 < th dose dependent rect. 2 7
702 50.58 humidity 50.0 270 > th dose independent rect. 17 9
709 50.60 wind 1.0 270 > th dose independent rect. 6 7
714 50.60 precipitation 0.1 270 < th dose independent rect. 1 17
717 50.60 precipitation 0.1 270 < th dose dependent rect. 1 17
718 50.61 radiation 10.0 270 < th dose independent rect. 17 9
719 50.61 radiation 1.0 270 < th dose independent rect. 10 15
724 50.62 humidity 50.0 270 > th dose independent rect. 7 4
728 50.62 radiation 1.0 270 < th dose independent rect. 12 13
752 50.64 wind 9.0 270 < th dose dependent rect. 12 7
768 50.66 radiation 1.0 270 > th dose independent rect. 8 3
793 50.69 radiation 1.0 270 > th dose independent rect. 9 1
795 50.69 atmosphere 995.0 270 > th dose independent rect. 18 7
804 50.70 precipitation 0.1 270 < th dose independent rect. 2 15
810 50.70 precipitation 0.1 270 < th dose dependent rect. 2 15
811 50.70 radiation 1.0 270 < th dose dependent rect. 5 21
831 50.76 humidity 50.0 270 > th dose dependent rect. 24 7
837 50.77 wind 1.0 270 > th dose independent rect. 13 17
877 50.84 wind 9.0 270 < th dose dependent rect. 7 4
903 50.90 wind 9.0 270 < th dose independent rect. 1 17
952 50.97 wind 1.0 270 > th dose independent rect. 8 3
967 50.98 precipitation 0.1 270 < th dose independent rect. 11 20
970 50.98 precipitation 0.1 270 < th dose dependent rect. 11 20