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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0649500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 5.06 (0.0487) R2 : 0.49
β1 : -1.01 (0.178) R2dD : 0.0381 R2D : 0.0274
β2 : 2.13 (0.134) R2dC : 0.321 R2C : 0.0853
β3 : 2.86 (0.167) R2dE : 0.375 R2E : 0.129
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.087 (0.104) R2dN8 : 0.000782 R2N8 : -0.00252
σ : 0.909
deviance : 381.16
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_____
C
peak time of C : 19.3
E
wheather : humidity
threshold : 59.3
memory length : 524
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 10.7
open length of G : 17.6

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
372.77 0.907 5.07 -0.929 2.09 3.02 1.99 0.0935 -0.0935 19.4 54.49 555 9.77 18.6
372.59 0.899 5.07 -0.93 2.08 3.01 2 -- -0.101 19.3 54.66 547 9.9 18.5
381.72 0.91 5.05 -1.04 2.11 2.78 -- 0.0108 -0.0612 19.4 60.2 503 10.3 18.3
381.16 0.909 5.06 -1.01 2.13 2.86 -- -- -0.087 19.3 59.3 524 10.7 17.6
432.68 0.969 5.19 -1.06 -- 2.41 -- 0.0256 -0.317 -- 42.93 352 12.2 13.6
452.73 0.997 5.06 -0.97 2.09 -- 0.724 -- -0.122 22.8 -- -- -- --
454.91 0.999 5.07 -1 2.08 -- -- -- -0.124 22.8 -- -- -- --
417.42 0.952 5.05 -0.972 -- 2.62 -- -- -0.139 -- 39.72 415 12 13.3
407.94 0.941 5.04 -- 2.13 2.83 -- -- 0.0362 19.5 57.99 549 10.5 17.8
723.46 1.26 5.01 -0.957 -- -- -- -- -0.111 -- -- -- -- --
481.27 1.03 5.04 -- 2.07 -- -- -- -0.0131 22.8 -- -- -- --
438.01 0.975 4.98 -- -- 3.82 -- -- 0.0479 -- -24.41 2089 8.18 17.4
747.6 1.28 4.99 -- -- -- -- -- -0.00483 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 387.33 humidity 50 720 > th dose dependent rect. 10 18
3 387.47 humidity 60 720 > th dose dependent rect. 7 21
22 389.41 humidity 60 720 > th dose dependent rect. 11 8
46 390.51 humidity 60 720 > th dose dependent rect. 7 13
47 390.65 humidity 60 720 > th dose dependent sin 21 NA
70 391.69 humidity 60 720 > th dose dependent rect. 23 21
71 391.70 humidity 70 720 > th dose independent rect. 7 12
78 391.82 humidity 70 720 > th dose independent rect. 15 3
86 392.09 humidity 60 720 > th dose dependent rect. 21 22
95 392.31 humidity 70 720 > th dose independent rect. 7 21
96 392.31 humidity 90 720 < th dose dependent rect. 19 21
101 392.40 humidity 90 720 < th dose dependent rect. 11 20
112 392.57 humidity 60 720 > th dose dependent rect. 10 23
144 393.32 humidity 70 720 > th dose independent rect. 16 1
150 393.47 humidity 70 720 > th dose independent rect. 11 8
155 393.57 humidity 60 720 > th dose dependent no NA NA
176 393.85 humidity 60 720 > th dose dependent rect. 3 23
181 393.95 humidity 70 720 > th dose independent rect. 7 19
195 394.18 humidity 70 720 > th dose independent rect. 24 19
216 394.43 humidity 80 720 < th dose dependent rect. 23 17
228 394.55 humidity 70 720 > th dose independent rect. 14 5
231 394.58 humidity 90 720 < th dose dependent rect. 23 22
241 394.66 humidity 70 720 > th dose independent rect. 21 22
262 394.81 humidity 60 720 > th dose dependent rect. 16 23
287 394.98 humidity 60 720 > th dose dependent rect. 3 17
299 395.10 humidity 70 720 > th dose independent rect. 10 18
306 395.13 humidity 80 720 < th dose dependent rect. 11 4
319 395.23 humidity 90 720 < th dose dependent rect. 9 7
334 395.29 humidity 90 720 < th dose dependent no NA NA
351 395.38 humidity 70 720 < th dose independent rect. 11 8
355 395.38 humidity 90 720 < th dose dependent rect. 2 23
376 395.49 humidity 90 720 < th dose dependent rect. 5 23
421 395.78 humidity 70 720 > th dose independent rect. 3 16
429 395.82 humidity 90 720 < th dose dependent sin 23 NA
471 396.07 humidity 70 720 < th dose independent rect. 11 22
522 396.41 humidity 70 720 > th dose independent rect. 11 22
535 396.46 humidity 60 720 > th dose dependent rect. 16 1
549 396.51 humidity 70 720 > th dose independent sin 19 NA
557 396.56 humidity 70 720 < th dose independent rect. 6 13
604 396.77 humidity 90 720 < th dose dependent rect. 11 10
624 396.88 humidity 80 720 < th dose dependent rect. 12 1
638 397.00 humidity 90 720 < th dose dependent rect. 9 12
677 397.22 humidity 90 720 < th dose dependent rect. 15 23
678 397.23 humidity 70 720 > th dose independent rect. 15 22
702 397.36 humidity 70 720 < th dose independent sin 21 NA
886 398.40 humidity 70 720 > th dose independent no NA NA
889 398.44 humidity 70 720 < th dose independent rect. 15 23
922 398.62 humidity 70 720 > th dose independent rect. 23 23
923 398.63 humidity 70 720 < th dose independent no NA NA