Os11g0649300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os11g0649300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 120.77 | 0.516 | 8.7 | 3.05 | 0.284 | -2.77 | -0.464 | -0.103 | 0.685 | 14.1 | 22.56 | 5101 | -- | -- |
| 120.76 | 0.512 | 8.7 | 3.04 | 0.291 | -2.75 | -0.491 | -- | 0.68 | 14.1 | 22.62 | 5170 | -- | -- |
| 121.53 | 0.513 | 8.7 | 3.05 | 0.276 | -2.73 | -- | -0.0779 | 0.681 | 13.7 | 22.63 | 5055 | -- | -- |
| 120.16 | 0.511 | 8.7 | 2.9 | 0.242 | -3 | -- | -- | 0.655 | 13.8 | 22.26 | 6223 | -- | -- |
| 125.29 | 0.521 | 8.7 | 3.08 | -- | -2.63 | -- | -0.02 | 0.693 | -- | 22.6 | 4728 | -- | -- |
| 210.15 | 0.68 | 8.56 | 4.46 | 0.217 | -- | -0.406 | -- | 1.3 | 14.4 | -- | -- | -- | -- |
| 210.73 | 0.68 | 8.56 | 4.45 | 0.216 | -- | -- | -- | 1.29 | 14.1 | -- | -- | -- | -- |
| 123.71 | 0.518 | 8.7 | 2.91 | -- | -2.97 | -- | -- | 0.666 | -- | 22.24 | 6135 | -- | -- |
| 150.65 | 0.572 | 8.87 | -- | 0.271 | -4.06 | -- | -- | -0.0953 | 13.7 | 21.1 | 47520 | -- | -- |
| 213.51 | 0.683 | 8.56 | 4.44 | -- | -- | -- | -- | 1.29 | -- | -- | -- | -- | -- |
| 732.2 | 1.27 | 8.67 | -- | 0.134 | -- | -- | -- | 0.799 | 13.4 | -- | -- | -- | -- |
| 154.94 | 0.58 | 8.88 | -- | -- | -4.03 | -- | -- | -0.0936 | -- | 20.97 | 47520 | -- | -- |
| 733.3 | 1.26 | 8.68 | -- | -- | -- | -- | -- | 0.797 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.32 | temperature | 20 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 37 | 119.94 | temperature | 10 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 107 | 121.29 | humidity | 70 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 123 | 121.49 | temperature | 25 | 4320 | < th | dose dependent | sin | 7 | NA |
| 193 | 121.94 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 17 |
| 255 | 122.18 | temperature | 25 | 4320 | < th | dose dependent | rect. | 15 | 17 |
| 439 | 122.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 470 | 123.14 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 720 | 124.08 | humidity | 60 | 43200 | < th | dose dependent | rect. | 22 | 13 |
| 730 | 124.13 | temperature | 10 | 4320 | > th | dose dependent | sin | 9 | NA |
| 994 | 124.96 | temperature | 25 | 270 | < th | dose dependent | rect. | 22 | 22 |