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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0648800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.94 (0.0353) R2 : 0.377
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.24 (0.0743) R2dN8 : 0.487 R2N8 : 0.377
σ : 0.665
deviance : 202.89
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
196.08 0.658 2.92 0.234 0.441 -0.517 -0.754 0.976 1.32 14.8 10.01 268 -- --
197.43 0.654 2.93 0.191 0.413 -0.488 -0.0607 -- 1.27 14.6 10 256 -- --
196.69 0.653 2.92 0.224 0.473 -0.534 -- 0.395 1.33 14.5 10 259 -- --
197.33 0.654 2.93 0.197 0.415 -0.486 -- -- 1.29 14.5 10.01 259 -- --
199.17 0.661 2.93 0.116 -- -0.179 -- 0.524 1.26 -- 20.77 215 -- --
201.98 0.666 2.94 0.0977 0.0333 -- -0.441 -- 1.25 19.6 -- -- -- --
202.46 0.666 2.94 0.107 0.044 -- -- -- 1.25 22.6 -- -- -- --
199.79 0.658 2.93 0.123 -- -0.251 -- -- 1.27 -- 22.29 213 -- --
198.23 0.656 2.94 -- 0.43 -0.497 -- -- 1.28 14.5 10.01 259 -- --
202.58 0.665 2.94 0.108 -- -- -- -- 1.25 -- -- -- -- --
202.77 0.666 2.94 -- 0.0448 -- -- -- 1.24 22.8 -- -- -- --
199.9 0.659 2.94 -- -- -0.301 -- -- 1.26 -- 30.3 220 -- --
202.89 0.665 2.94 -- -- -- -- -- 1.24 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 181.19 radiation 1 30 < th dose independent rect. 11 3
9 181.19 radiation 1 30 < th dose dependent rect. 11 3
51 183.85 radiation 1 10 < th dose independent rect. 13 1
61 183.85 radiation 1 10 < th dose dependent rect. 13 1
71 184.03 humidity 80 90 > th dose dependent rect. 12 1
78 184.47 humidity 80 90 > th dose independent rect. 12 1
87 185.42 wind 7 1440 > th dose dependent rect. 18 1
103 186.89 wind 7 1440 > th dose independent rect. 18 1
105 187.22 radiation 1 1440 < th dose independent rect. 11 1
106 187.22 radiation 1 1440 < th dose dependent rect. 11 1
112 188.02 radiation 1 720 < th dose independent rect. 8 5
113 188.02 radiation 1 720 < th dose dependent rect. 8 5
118 188.40 humidity 80 1440 < th dose independent rect. 23 2
120 188.54 wind 7 1440 < th dose independent rect. 18 1
126 188.72 humidity 80 1440 < th dose dependent rect. 23 2
142 189.14 humidity 80 1440 > th dose independent rect. 23 1
148 189.26 temperature 25 30 > th dose dependent rect. 20 13
152 189.52 humidity 80 10 > th dose independent rect. 14 1
159 189.63 humidity 60 14400 > th dose independent rect. 22 9
166 189.79 temperature 25 30 > th dose dependent rect. 18 15
169 190.00 humidity 90 720 > th dose independent rect. 12 1
173 190.00 humidity 90 720 > th dose dependent rect. 12 1
186 190.25 wind 1 10 > th dose independent rect. 13 23
201 190.57 atmosphere 1015 4320 > th dose dependent rect. 3 1
202 190.60 radiation 10 4320 < th dose dependent rect. 18 11
210 190.85 humidity 60 14400 > th dose independent rect. 24 7
211 190.88 humidity 60 14400 < th dose dependent rect. 19 12
212 190.89 temperature 25 270 > th dose independent rect. 9 6
214 190.91 radiation 10 4320 < th dose dependent rect. 18 1
219 190.96 wind 9 1440 > th dose dependent rect. 15 2
222 190.98 humidity 60 14400 < th dose independent rect. 19 2
233 190.99 humidity 60 14400 < th dose dependent rect. 19 3
246 191.03 radiation 10 4320 < th dose dependent rect. 18 3
250 191.05 humidity 60 14400 > th dose independent rect. 19 9
253 191.06 radiation 10 4320 < th dose dependent rect. 18 7
257 191.10 radiation 10 4320 < th dose dependent rect. 18 5
262 191.12 radiation 40 14400 < th dose dependent rect. 22 7
264 191.16 humidity 60 14400 > th dose independent rect. 19 11
269 191.25 radiation 1 4320 < th dose independent rect. 22 7
296 191.42 humidity 60 14400 > th dose independent rect. 19 2
299 191.43 radiation 40 14400 < th dose dependent rect. 3 2
301 191.43 temperature 25 30 > th dose dependent rect. 24 9
306 191.49 temperature 25 90 > th dose dependent rect. 2 2
310 191.51 humidity 60 14400 > th dose independent rect. 19 6
313 191.56 temperature 25 90 > th dose independent rect. 1 3
318 191.59 radiation 1 4320 > th dose dependent rect. 18 1
329 191.62 humidity 60 14400 > th dose independent rect. 19 4
332 191.64 temperature 25 30 > th dose dependent rect. 20 11
345 191.72 temperature 20 10 > th dose dependent rect. 2 3
346 191.72 radiation 40 14400 < th dose dependent rect. 24 5
359 191.79 radiation 1 4320 < th dose independent rect. 24 5
361 191.81 radiation 1 4320 < th dose independent rect. 2 3
401 191.97 humidity 60 14400 > th dose independent rect. 2 5
408 191.99 temperature 25 30 > th dose dependent rect. 24 7
413 192.02 wind 9 1440 < th dose independent rect. 15 5
431 192.10 radiation 10 1440 < th dose independent rect. 18 11
438 192.12 wind 7 43200 > th dose independent rect. 13 1
449 192.15 wind 7 43200 < th dose independent rect. 13 1
456 192.18 humidity 50 14400 < th dose dependent rect. 10 1
472 192.20 radiation 10 4320 < th dose independent rect. 18 1
475 192.20 temperature 25 90 > th dose dependent rect. 1 4
523 192.33 radiation 40 14400 < th dose dependent rect. 20 9
532 192.37 radiation 40 14400 < th dose independent rect. 16 8
538 192.39 humidity 70 14400 > th dose independent rect. 22 6
541 192.40 radiation 40 14400 < th dose independent rect. 15 16
545 192.41 radiation 40 14400 < th dose independent rect. 15 13
547 192.42 wind 9 43200 > th dose dependent rect. 14 1
548 192.43 radiation 40 14400 < th dose independent rect. 15 1
549 192.43 radiation 40 14400 < th dose independent rect. 15 3
577 192.48 humidity 80 1440 < th dose dependent rect. 22 6
582 192.50 radiation 40 14400 < th dose independent rect. 15 10
601 192.54 humidity 70 14400 < th dose dependent rect. 6 2
619 192.57 wind 9 1440 < th dose dependent rect. 18 1
633 192.59 humidity 60 14400 > th dose independent rect. 18 15
653 192.65 humidity 80 14400 < th dose independent rect. 21 2
660 192.66 radiation 1 4320 < th dose independent rect. 20 9
671 192.68 radiation 40 30 < th dose dependent rect. 3 23
673 192.69 radiation 10 4320 < th dose independent rect. 18 7
675 192.69 wind 7 43200 > th dose dependent rect. 12 3
677 192.70 radiation 30 90 < th dose dependent rect. 12 13
682 192.73 humidity 80 14400 < th dose dependent rect. 21 1
688 192.75 temperature 15 14400 < th dose dependent rect. 4 1
692 192.76 wind 9 1440 < th dose independent rect. 15 11
693 192.76 temperature 25 270 > th dose independent rect. 23 17
697 192.77 wind 9 1440 < th dose independent rect. 15 9
704 192.79 humidity 50 14400 < th dose independent rect. 9 1
712 192.81 radiation 1 14400 < th dose dependent rect. 9 1
760 192.88 wind 9 1440 < th dose independent rect. 15 18
764 192.88 humidity 90 14400 < th dose dependent rect. 19 12
802 192.93 humidity 90 14400 < th dose dependent rect. 19 9
805 192.94 temperature 15 14400 < th dose dependent rect. 23 1
826 192.96 humidity 90 14400 < th dose dependent rect. 19 6
837 192.98 humidity 80 1440 < th dose independent rect. 22 6
867 193.02 temperature 15 14400 < th dose independent rect. 9 3
884 193.04 humidity 50 43200 < th dose dependent rect. 15 4
887 193.05 temperature 25 30 < th dose independent rect. 12 2
891 193.05 radiation 20 10 < th dose independent rect. 6 9
894 193.05 humidity 50 43200 < th dose dependent rect. 15 2
899 193.06 humidity 60 14400 < th dose independent rect. 6 1
903 193.06 radiation 20 14400 > th dose independent rect. 17 1
958 193.06 humidity 50 43200 < th dose dependent sin 12 NA
963 193.06 radiation 20 14400 > th dose dependent rect. 17 1