FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0648700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.02 (0.0266) R2 : 0.307
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.796 (0.056) R2dN8 : 0.396 R2N8 : 0.307
σ : 0.501
deviance : 115.35
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
108.16 0.489 2.95 0.606 0.0688 -0.769 -0.237 6.16 0.906 11.9 26.9 206 -- --
113.96 0.501 3.02 0.0305 0.0934 -0.138 -0.401 -- 0.797 6.58 26.43 190 -- --
107.93 0.484 2.95 0.626 0.0496 -0.9 -- 7.25 0.897 12.1 27.6 219 -- --
114.27 0.498 3.02 0.0306 0.0678 -0.152 -- -- 0.799 7.27 26.5 202 -- --
108.09 0.484 2.94 0.676 -- -0.958 -- 8.03 0.893 -- 27.7 230 -- --
114.3 0.501 3.02 0.0101 0.119 -- -0.367 -- 0.793 6.08 -- -- -- --
114.63 0.501 3.02 0.00649 0.117 -- -- -- 0.795 6.01 -- -- -- --
114.47 0.498 3.02 0.0332 -- -0.193 -- -- 0.799 -- 26.48 207 -- --
114.29 0.498 3.02 -- 0.0709 -0.145 -- -- 0.794 7.1 26.53 202 -- --
115.34 0.502 3.02 0.00992 -- -- -- -- 0.797 -- -- -- -- --
114.63 0.501 3.02 -- 0.118 -- -- -- 0.794 6.01 -- -- -- --
114.51 0.498 3.02 -- -- -0.187 -- -- 0.796 -- 26.49 207 -- --
115.35 0.501 3.02 -- -- -- -- -- 0.796 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 101.31 radiation 10.0 10 > th dose independent rect. 6 1
27 101.31 radiation 10.0 10 > th dose dependent rect. 6 1
57 104.12 humidity 70.0 4320 > th dose independent rect. 21 1
58 104.91 atmosphere 1010.0 10 < th dose independent rect. 2 15
59 105.11 wind 3.0 10 < th dose dependent rect. 6 1
61 105.23 atmosphere 1010.0 10 < th dose independent rect. 23 19
64 105.42 atmosphere 1005.0 30 > th dose dependent rect. 6 1
68 105.73 atmosphere 1010.0 10 < th dose independent sin 5 NA
71 105.96 temperature 30.0 270 > th dose independent rect. 12 1
72 106.01 atmosphere 1010.0 10 < th dose independent rect. 21 23
74 106.08 wind 1.0 10 < th dose independent rect. 6 1
75 106.10 humidity 80.0 30 > th dose dependent rect. 6 1
76 106.13 radiation 40.0 270 > th dose independent rect. 12 1
78 106.18 humidity 70.0 4320 > th dose independent rect. 22 8
79 106.20 radiation 10.0 10 < th dose dependent rect. 6 1
82 106.39 atmosphere 1005.0 30 > th dose dependent rect. 12 5
83 106.43 atmosphere 1010.0 10 < th dose independent rect. 23 21
86 106.56 atmosphere 1010.0 10 < th dose independent rect. 21 21
88 106.62 atmosphere 1010.0 10 < th dose independent rect. 2 13
89 106.64 temperature 30.0 30 < th dose dependent rect. 6 1
95 106.86 temperature 25.0 270 > th dose dependent rect. 12 1
97 106.93 temperature 25.0 10 > th dose independent rect. 18 15
112 106.96 temperature 25.0 30 > th dose independent rect. 18 13
113 106.96 temperature 25.0 270 > th dose dependent rect. 23 16
120 107.08 temperature 25.0 270 > th dose dependent rect. 10 5
123 107.11 atmosphere 995.0 10 > th dose dependent rect. 6 6
134 107.26 temperature 25.0 270 > th dose dependent rect. 11 3
138 107.32 temperature 25.0 10 > th dose independent rect. 18 17
147 107.45 atmosphere 1005.0 30 > th dose independent rect. 12 5
152 107.50 radiation 40.0 270 > th dose dependent rect. 12 1
159 107.53 temperature 25.0 30 > th dose dependent rect. 12 5
162 107.54 humidity 50.0 10 > th dose independent rect. 7 23
167 107.57 wind 3.0 30 > th dose independent rect. 20 1
168 107.57 radiation 40.0 270 > th dose independent rect. 12 22
172 107.59 temperature 20.0 30 > th dose dependent rect. 20 1
176 107.61 temperature 25.0 720 > th dose dependent rect. 22 11
177 107.62 humidity 80.0 30 > th dose independent rect. 20 1
178 107.62 atmosphere 1005.0 30 > th dose dependent rect. 20 1
179 107.63 temperature 10.0 1440 > th dose independent rect. 21 1
182 107.63 temperature 30.0 1440 < th dose independent rect. 21 1
186 107.63 humidity 50.0 1440 > th dose independent rect. 21 1
192 107.63 atmosphere 995.0 1440 > th dose independent rect. 21 1
193 107.63 radiation 1.0 1440 < th dose independent rect. 21 1
214 107.63 temperature 10.0 1440 > th dose independent rect. 22 23
218 107.64 radiation 10.0 30 > th dose independent sin 9 NA
220 107.65 temperature 25.0 30 > th dose independent rect. 20 1
223 107.65 radiation 40.0 1440 < th dose dependent rect. 21 1
228 107.66 radiation 40.0 14400 < th dose dependent rect. 21 1
229 107.66 atmosphere 995.0 30 > th dose dependent rect. 6 17
244 107.70 humidity 70.0 30 > th dose dependent rect. 20 1
257 107.73 wind 5.0 30 < th dose independent rect. 20 1
259 107.73 atmosphere 1005.0 30 > th dose independent rect. 20 1
269 107.75 temperature 10.0 30 > th dose independent rect. 20 1
271 107.75 temperature 30.0 30 < th dose independent rect. 20 1
272 107.75 humidity 50.0 30 > th dose independent rect. 20 1
275 107.75 atmosphere 995.0 30 > th dose independent rect. 20 1
276 107.75 atmosphere 1010.0 30 < th dose independent rect. 20 1
278 107.75 radiation 1.0 30 < th dose independent rect. 20 1
283 107.75 precipitation 0.1 30 < th dose independent rect. 20 1
284 107.75 temperature 10.0 30 > th dose independent rect. 21 23
285 107.75 wind 1.0 30 > th dose dependent rect. 20 1
286 107.75 radiation 1.0 30 < th dose dependent rect. 20 1
291 107.75 precipitation 0.1 30 < th dose dependent rect. 20 1
292 107.75 atmosphere 1005.0 10 > th dose dependent rect. 6 17
303 107.79 wind 9.0 30 < th dose dependent rect. 20 1
308 107.83 humidity 90.0 30 < th dose independent rect. 20 1
315 107.86 temperature 30.0 270 > th dose independent rect. 18 20
357 107.93 wind 9.0 1440 < th dose independent rect. 21 1
358 107.93 wind 9.0 30 < th dose independent rect. 21 23
368 107.98 atmosphere 1015.0 30 < th dose dependent rect. 20 1
384 108.05 atmosphere 1010.0 10 < th dose independent rect. 19 23
391 108.08 humidity 70.0 4320 > th dose independent rect. 21 3
392 108.08 temperature 25.0 720 > th dose independent rect. 23 10
395 108.09 atmosphere 1005.0 10 > th dose dependent rect. 18 5
428 108.14 humidity 60.0 10 > th dose independent rect. 12 18
431 108.15 atmosphere 995.0 10 > th dose independent rect. 12 18
434 108.16 humidity 90.0 30 < th dose dependent rect. 20 1
457 108.27 temperature 30.0 30 < th dose dependent rect. 20 1
474 108.34 humidity 60.0 90 > th dose independent rect. 11 6
475 108.34 temperature 25.0 270 > th dose dependent sin 3 NA
484 108.36 precipitation 0.1 30 < th dose independent rect. 6 17
487 108.36 precipitation 0.1 30 < th dose dependent rect. 6 17
488 108.37 temperature 10.0 1440 > th dose independent rect. 24 7
491 108.37 temperature 30.0 1440 < th dose independent rect. 24 7
495 108.37 humidity 50.0 1440 > th dose independent rect. 24 7
500 108.37 atmosphere 995.0 1440 > th dose independent rect. 24 7
501 108.37 radiation 40.0 1440 < th dose independent rect. 24 7
505 108.37 temperature 10.0 1440 > th dose independent rect. 7 17
508 108.37 wind 9.0 10 < th dose independent rect. 12 18
510 108.38 wind 9.0 1440 < th dose independent rect. 7 1
511 108.38 temperature 25.0 10 > th dose independent rect. 6 1
512 108.38 temperature 10.0 1440 > th dose independent rect. 7 1
517 108.38 temperature 30.0 1440 < th dose independent rect. 7 1
521 108.38 humidity 50.0 1440 > th dose independent rect. 7 1
526 108.38 atmosphere 995.0 1440 > th dose independent rect. 7 1
527 108.38 atmosphere 1015.0 1440 < th dose independent rect. 7 1
528 108.38 wind 9.0 30 < th dose independent rect. 23 7
529 108.38 temperature 10.0 30 > th dose independent rect. 23 7
530 108.38 temperature 30.0 30 < th dose independent rect. 23 7
531 108.38 humidity 50.0 30 > th dose independent rect. 23 7
534 108.38 atmosphere 995.0 30 > th dose independent rect. 23 7
535 108.38 radiation 20.0 30 < th dose independent rect. 23 7
538 108.38 temperature 25.0 10 > th dose independent rect. 20 13
539 108.38 temperature 10.0 30 > th dose independent rect. 6 17
541 108.38 atmosphere 1015.0 30 < th dose independent rect. 6 17
543 108.38 temperature 10.0 1440 > th dose independent rect. 8 23
551 108.40 wind 9.0 10 < th dose independent rect. 6 6
565 108.41 temperature 25.0 10 > th dose independent rect. 20 15
572 108.42 temperature 25.0 90 > th dose independent rect. 11 6
575 108.43 humidity 90.0 30 < th dose independent rect. 6 1
577 108.43 precipitation 0.1 30 < th dose independent rect. 23 7
579 108.43 humidity 60.0 90 > th dose independent rect. 23 18
581 108.43 precipitation 0.1 30 < th dose dependent rect. 23 7
583 108.44 humidity 80.0 30 > th dose independent rect. 6 1
586 108.44 radiation 40.0 30 < th dose dependent rect. 23 7
591 108.46 wind 1.0 30 > th dose independent rect. 6 1
593 108.46 atmosphere 1005.0 30 > th dose independent rect. 6 1
600 108.47 temperature 10.0 30 > th dose independent rect. 6 1
602 108.47 temperature 30.0 30 < th dose independent rect. 6 1
603 108.47 humidity 50.0 30 > th dose independent rect. 6 1
606 108.47 atmosphere 995.0 30 > th dose independent rect. 6 1
607 108.47 atmosphere 1015.0 30 < th dose independent rect. 6 1
608 108.47 radiation 20.0 30 < th dose independent rect. 6 1
611 108.47 precipitation 0.1 30 < th dose independent rect. 6 1
613 108.47 temperature 10.0 30 > th dose independent rect. 7 23
614 108.47 precipitation 0.1 30 < th dose dependent rect. 6 1
616 108.48 precipitation 0.1 10 < th dose independent rect. 6 6
618 108.48 wind 9.0 30 < th dose independent rect. 6 17
620 108.48 precipitation 0.1 10 < th dose dependent rect. 6 6
625 108.49 temperature 10.0 10 > th dose independent rect. 6 6
628 108.49 atmosphere 995.0 10 > th dose independent rect. 6 6
629 108.49 atmosphere 1015.0 10 < th dose independent rect. 6 6
631 108.49 atmosphere 1010.0 10 < th dose independent rect. 23 9
633 108.49 temperature 10.0 10 > th dose independent rect. 12 18
639 108.51 humidity 50.0 30 > th dose dependent rect. 23 7
646 108.52 wind 9.0 4320 > th dose dependent rect. 13 2
668 108.54 radiation 1.0 10 > th dose independent rect. 6 6
671 108.54 precipitation 0.1 10 < th dose independent rect. 12 18
682 108.54 precipitation 0.1 10 < th dose dependent rect. 12 18
693 108.57 atmosphere 995.0 30 > th dose dependent rect. 6 15
701 108.60 wind 1.0 30 > th dose independent rect. 6 17
702 108.60 atmosphere 1005.0 10 > th dose dependent rect. 3 9
705 108.61 wind 9.0 10 < th dose dependent rect. 23 7
706 108.61 temperature 25.0 10 > th dose dependent rect. 12 8
711 108.63 atmosphere 1005.0 270 > th dose dependent rect. 12 1
723 108.66 temperature 25.0 10 > th dose independent rect. 12 5
738 108.68 atmosphere 1000.0 30 > th dose independent rect. 7 23
744 108.69 atmosphere 1005.0 270 > th dose dependent rect. 18 1
769 108.76 temperature 10.0 1440 > th dose independent rect. 7 6
772 108.76 atmosphere 995.0 1440 > th dose independent rect. 7 6
773 108.76 temperature 10.0 1440 > th dose independent rect. 13 18
805 108.80 atmosphere 1010.0 10 < th dose independent rect. 11 23
807 108.80 temperature 10.0 30 > th dose dependent rect. 23 7
810 108.81 temperature 30.0 10 < th dose independent rect. 17 23
812 108.82 radiation 1.0 90 < th dose independent rect. 23 9
818 108.83 wind 1.0 30 > th dose independent rect. 6 6
821 108.83 radiation 1.0 30 > th dose dependent rect. 12 18
822 108.84 radiation 40.0 270 > th dose independent sin 13 NA
829 108.85 temperature 25.0 720 < th dose independent rect. 23 13
830 108.85 atmosphere 995.0 30 > th dose dependent rect. 3 9
836 108.87 atmosphere 1010.0 10 < th dose independent no NA NA
860 108.90 atmosphere 1005.0 30 > th dose dependent rect. 3 20
861 108.91 atmosphere 1010.0 90 < th dose independent rect. 11 6
869 108.92 radiation 1.0 30 > th dose dependent rect. 12 7
885 108.94 wind 3.0 270 > th dose independent rect. 12 1
890 108.95 humidity 80.0 30 < th dose independent rect. 12 5
892 108.96 wind 3.0 30 > th dose independent rect. 12 5
894 108.96 temperature 10.0 30 > th dose dependent rect. 6 1
900 108.98 precipitation 0.1 30 < th dose independent rect. 7 23
903 108.98 precipitation 0.1 30 < th dose dependent rect. 7 23
908 109.00 temperature 30.0 10 < th dose independent rect. 6 8
919 109.02 temperature 25.0 10 > th dose dependent rect. 12 3
920 109.02 atmosphere 995.0 30 > th dose dependent rect. 12 18
923 109.03 radiation 30.0 30 > th dose independent rect. 12 3
927 109.04 humidity 50.0 30 > th dose independent rect. 6 6
941 109.06 radiation 1.0 90 < th dose dependent rect. 23 9
944 109.07 temperature 30.0 270 < th dose independent sin 6 NA
951 109.08 humidity 90.0 10 < th dose independent rect. 6 6
962 109.09 atmosphere 995.0 10 > th dose dependent rect. 18 18
964 109.10 atmosphere 1010.0 30 < th dose independent rect. 12 1
965 109.10 wind 9.0 4320 > th dose independent rect. 13 2
987 109.11 temperature 25.0 30 > th dose independent rect. 12 1
988 109.11 temperature 10.0 1440 > th dose independent rect. 13 1
992 109.11 humidity 60.0 30 > th dose independent rect. 12 1
993 109.11 atmosphere 995.0 1440 > th dose independent rect. 13 1
999 109.11 temperature 10.0 1440 > th dose independent rect. 14 23