Os11g0648100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Kinesin, motor region domain containing protein.
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Os11g0648100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Kinesin, motor region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 250.98 | 0.744 | 8.37 | -4.58 | 2.74 | 5.14 | -0.963 | -3.77 | -0.275 | 18.6 | 15.38 | 282 | 11.2 | 21.9 |
| 257.35 | 0.747 | 8.3 | -4.01 | 2.78 | 5.18 | -1.75 | -- | -0.118 | 18.3 | 13.66 | 310 | 11.2 | 21.9 |
| 251.46 | 0.739 | 8.37 | -4.65 | 2.75 | 5.09 | -- | -4.35 | -0.276 | 18.4 | 15.42 | 294 | 11.4 | 21.6 |
| 264.62 | 0.758 | 8.3 | -3.95 | 2.83 | 5.11 | -- | -- | -0.123 | 18.2 | 14.43 | 314 | 11.4 | 21.6 |
| 417.24 | 0.951 | 8.31 | -3.98 | -- | 6.63 | -- | -0.0528 | -0.201 | -- | 17.76 | 549 | 6.88 | 17.8 |
| 576.36 | 1.13 | 8.17 | -3.02 | 4.11 | -- | -0.581 | -- | 0.623 | 18.9 | -- | -- | -- | -- |
| 577.23 | 1.13 | 8.17 | -3.01 | 4.11 | -- | -- | -- | 0.621 | 18.9 | -- | -- | -- | -- |
| 384.1 | 0.913 | 8.22 | -4.12 | -- | 6.56 | -- | -- | -0.0377 | -- | 14.6 | 511 | 7 | 18.2 |
| 669.92 | 1.21 | 8.28 | -- | 2.73 | 4.82 | -- | -- | 0.177 | 18 | 14.5 | 279 | 11.6 | 21.5 |
| 1463.53 | 1.79 | 8.08 | -3.1 | -- | -- | -- | -- | 0.544 | -- | -- | -- | -- | -- |
| 816.05 | 1.34 | 8.1 | -- | 4.14 | -- | -- | -- | 0.956 | 18.9 | -- | -- | -- | -- |
| 685.56 | 1.22 | 8.07 | -- | -- | 4.86 | -- | -- | 0.69 | -- | 6.812 | 333 | 11.6 | 9.16 |
| 1716.5 | 1.93 | 8 | -- | -- | -- | -- | -- | 0.887 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 254.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 26 | 290.24 | temperature | 15 | 270 | > th | dose dependent | rect. | 21 | 22 |
| 48 | 301.25 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 16 |
| 53 | 301.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 19 |
| 175 | 314.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 180 | 314.97 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 197 | 315.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 237 | 317.87 | temperature | 30 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 240 | 318.07 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 7 |
| 273 | 319.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 17 |
| 287 | 320.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 296 | 320.98 | temperature | 15 | 720 | > th | dose dependent | rect. | 16 | 23 |
| 351 | 322.88 | temperature | 20 | 1440 | > th | dose dependent | sin | 18 | NA |
| 354 | 322.92 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 21 |
| 376 | 323.73 | temperature | 15 | 270 | > th | dose dependent | sin | 19 | NA |
| 402 | 324.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 22 |
| 506 | 326.61 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 22 |
| 703 | 328.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 18 |