Os11g0647800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description :
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Os11g0647800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description :
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.95 | 0.538 | 3.29 | 0.332 | 0.27 | -0.474 | 1.72 | -0.74 | -0.135 | 16 | 69.9 | 6018 | -- | -- |
| 131.64 | 0.534 | 3.29 | 0.357 | 0.277 | -0.469 | 1.68 | -- | -0.122 | 16.1 | 69 | 6398 | -- | -- |
| 138.42 | 0.552 | 3.29 | 0.427 | 0.238 | 0.0272 | -- | 1.02 | -0.168 | 14.4 | 70 | 5788 | -- | -- |
| 139.14 | 0.549 | 3.28 | 0.386 | 0.303 | -0.566 | -- | -- | -0.108 | 14.8 | 69.91 | 6058 | -- | -- |
| 140.47 | 0.555 | 3.29 | 0.409 | -- | 0.148 | -- | 1.03 | -0.17 | -- | 70 | 5788 | -- | -- |
| 135.48 | 0.546 | 3.3 | 0.39 | 0.253 | -- | 1.73 | -- | -0.183 | 16 | -- | -- | -- | -- |
| 143.63 | 0.561 | 3.29 | 0.413 | 0.272 | -- | -- | -- | -0.173 | 14.6 | -- | -- | -- | -- |
| 143.06 | 0.557 | 3.28 | 0.389 | -- | -0.538 | -- | -- | -0.113 | -- | 71 | 5518 | -- | -- |
| 143.03 | 0.557 | 3.29 | -- | 0.299 | -0.603 | -- | -- | -0.147 | 14.8 | 69.77 | 6087 | -- | -- |
| 147.96 | 0.568 | 3.29 | 0.401 | -- | -- | -- | -- | -0.18 | -- | -- | -- | -- | -- |
| 148.12 | 0.569 | 3.3 | -- | 0.264 | -- | -- | -- | -0.219 | 14.6 | -- | -- | -- | -- |
| 146.97 | 0.565 | 3.28 | -- | -- | -0.574 | -- | -- | -0.111 | -- | 71 | 5559 | -- | -- |
| 152.2 | 0.576 | 3.3 | -- | -- | -- | -- | -- | -0.225 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.50 | radiation | 1 | 90 | < th | dose independent | rect. | 8 | 3 |
| 2 | 124.50 | radiation | 1 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 11 | 128.42 | wind | 1 | 10 | < th | dose dependent | rect. | 12 | 2 |
| 13 | 128.49 | wind | 1 | 30 | < th | dose dependent | rect. | 9 | 2 |
| 19 | 128.69 | wind | 1 | 10 | < th | dose independent | rect. | 12 | 2 |
| 27 | 129.08 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 50 | 129.36 | radiation | 10 | 10 | < th | dose independent | rect. | 7 | 4 |
| 51 | 129.40 | wind | 7 | 14400 | > th | dose dependent | rect. | 16 | 21 |
| 52 | 129.44 | wind | 3 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 55 | 129.54 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 58 | 129.57 | wind | 9 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 62 | 129.60 | wind | 1 | 14400 | > th | dose dependent | rect. | 24 | 8 |
| 67 | 129.64 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 69 | 129.64 | wind | 9 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 70 | 129.64 | wind | 9 | 14400 | < th | dose dependent | rect. | 24 | 8 |
| 71 | 129.64 | temperature | 30 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 88 | 129.70 | wind | 9 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 111 | 129.75 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 114 | 129.76 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 118 | 129.76 | wind | 3 | 14400 | > th | dose dependent | rect. | 21 | 11 |
| 125 | 129.77 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 9 |
| 130 | 129.80 | wind | 7 | 14400 | > th | dose independent | rect. | 16 | 21 |
| 139 | 129.83 | wind | 7 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 140 | 129.83 | radiation | 10 | 10 | < th | dose dependent | rect. | 8 | 2 |
| 163 | 129.87 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 173 | 129.89 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 2 |
| 180 | 129.90 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 189 | 129.90 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 7 |
| 190 | 129.90 | wind | 9 | 14400 | < th | dose dependent | rect. | 21 | 11 |
| 207 | 129.93 | wind | 3 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 221 | 129.94 | wind | 9 | 14400 | < th | dose dependent | sin | 7 | NA |
| 245 | 129.96 | wind | 1 | 14400 | > th | dose dependent | sin | 7 | NA |
| 255 | 129.96 | temperature | 30 | 270 | > th | dose dependent | rect. | 18 | 16 |
| 258 | 129.97 | temperature | 30 | 270 | > th | dose dependent | rect. | 8 | 1 |
| 279 | 129.98 | wind | 3 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 284 | 129.98 | wind | 9 | 4320 | > th | dose dependent | rect. | 6 | 5 |
| 293 | 129.99 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 314 | 130.02 | temperature | 30 | 270 | > th | dose independent | rect. | 8 | 1 |
| 322 | 130.02 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 348 | 130.03 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 2 |
| 352 | 130.03 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 21 |
| 364 | 130.05 | wind | 3 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 367 | 130.05 | wind | 3 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 373 | 130.06 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 381 | 130.07 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 10 | 1 |
| 412 | 130.10 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 429 | 130.12 | wind | 1 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 437 | 130.13 | wind | 1 | 30 | < th | dose independent | rect. | 9 | 1 |
| 455 | 130.15 | wind | 9 | 14400 | < th | dose independent | sin | 8 | NA |
| 460 | 130.15 | humidity | 80 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 463 | 130.16 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 10 | 2 |
| 478 | 130.17 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 481 | 130.17 | wind | 3 | 14400 | < th | dose independent | rect. | 21 | 11 |
| 485 | 130.17 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 504 | 130.18 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 540 | 130.21 | temperature | 20 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 556 | 130.22 | humidity | 80 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 571 | 130.23 | humidity | 90 | 90 | > th | dose independent | rect. | 2 | 1 |
| 577 | 130.23 | temperature | 30 | 270 | > th | dose independent | rect. | 18 | 16 |
| 612 | 130.26 | humidity | 50 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 662 | 130.29 | humidity | 70 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 705 | 130.32 | wind | 9 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 729 | 130.33 | humidity | 50 | 14400 | < th | dose dependent | sin | 9 | NA |
| 745 | 130.35 | wind | 3 | 14400 | > th | dose independent | sin | 8 | NA |
| 765 | 130.36 | wind | 1 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 773 | 130.37 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 777 | 130.37 | humidity | 50 | 4320 | > th | dose independent | rect. | 19 | 15 |
| 809 | 130.39 | wind | 3 | 14400 | < th | dose independent | sin | 7 | NA |
| 814 | 130.39 | wind | 9 | 14400 | < th | dose independent | rect. | 19 | 17 |
| 854 | 130.41 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 858 | 130.41 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 6 |
| 872 | 130.42 | radiation | 20 | 10 | > th | dose independent | rect. | 9 | 1 |
| 911 | 130.45 | humidity | 50 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 939 | 130.46 | temperature | 30 | 90 | > th | dose dependent | sin | 9 | NA |
| 966 | 130.47 | wind | 7 | 14400 | > th | dose dependent | sin | 8 | NA |
| 986 | 130.48 | humidity | 50 | 14400 | < th | dose dependent | rect. | 11 | 7 |