Os11g0644900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Non-protein coding transcript, uncharacterized transcript.
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Os11g0644900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Non-protein coding transcript, uncharacterized transcript.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 122.01 | 0.519 | 3.06 | -0.39 | 0.0897 | 0.74 | 0.078 | -7.18 | -0.0426 | 8.33 | 30.7 | 3 | -- | -- |
| 126.57 | 0.528 | 3.01 | 0.0508 | 0.098 | -0.135 | -0.0542 | -- | -0.0503 | 9.78 | 32.76 | 3 | -- | -- |
| 122.01 | 0.514 | 3.06 | -0.395 | 0.0894 | 0.734 | -- | -7.2 | -0.0423 | 8.91 | 30.71 | 14 | -- | -- |
| 126.51 | 0.527 | 3.01 | 0.0505 | 0.0987 | -0.13 | -- | -- | -0.0519 | 9.59 | 32.1 | 13 | -- | -- |
| 122.46 | 0.515 | 3.06 | -0.398 | -- | 0.738 | -- | -7.27 | -0.0421 | -- | 30.7 | 14 | -- | -- |
| 126.75 | 0.528 | 3.01 | 0.0427 | 0.1 | -- | -0.00464 | -- | -0.0473 | 9.02 | -- | -- | -- | -- |
| 126.75 | 0.527 | 3.01 | 0.0425 | 0.1 | -- | -- | -- | -0.0474 | 8.99 | -- | -- | -- | -- |
| 126.83 | 0.525 | 3.02 | 0.0567 | -- | -0.169 | -- | -- | -0.0558 | -- | 32.01 | 109 | -- | -- |
| 126.42 | 0.524 | 3.02 | -- | 0.0909 | -0.153 | -- | -- | -0.0602 | 10.1 | 31.98 | 105 | -- | -- |
| 127.32 | 0.527 | 3.02 | 0.0424 | -- | -- | -- | -- | -0.0467 | -- | -- | -- | -- | -- |
| 126.8 | 0.527 | 3.01 | -- | 0.1 | -- | -- | -- | -0.0521 | 8.96 | -- | -- | -- | -- |
| 126.91 | 0.525 | 3.02 | -- | -- | -0.165 | -- | -- | -0.0614 | -- | 32.01 | 109 | -- | -- |
| 127.37 | 0.527 | 3.02 | -- | -- | -- | -- | -- | -0.0514 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.62 | humidity | 80.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 3 | 118.72 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 9 | 120.74 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 10 | 120.75 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 11 | 120.76 | wind | 7.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 13 | 120.96 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 16 | 120.96 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 20 | 120.96 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 29 | 120.96 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 30 | 120.96 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 50 | 120.96 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 53 | 120.96 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 80 | 121.60 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 11 | 2 |
| 82 | 121.64 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 83 | 121.65 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 87 | 121.68 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 91 | 121.70 | wind | 9.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 92 | 121.70 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 95 | 121.70 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 99 | 121.70 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 109 | 121.70 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 110 | 121.70 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 130 | 121.70 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 24 | 23 |
| 133 | 121.70 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 138 | 121.73 | humidity | 90.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 158 | 121.77 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 161 | 121.78 | temperature | 25.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 163 | 121.79 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 167 | 121.81 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 172 | 121.83 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 1 |
| 175 | 121.83 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 176 | 121.83 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 10 | 7 |
| 177 | 121.84 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 178 | 121.84 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 180 | 121.87 | wind | 5.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 183 | 121.87 | temperature | 10.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 185 | 121.87 | temperature | 30.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 186 | 121.87 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 189 | 121.87 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 22 | 1 |
| 190 | 121.87 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 192 | 121.87 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 1 |
| 197 | 121.87 | temperature | 10.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 198 | 121.87 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 206 | 121.88 | wind | 9.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 208 | 121.89 | temperature | 30.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 214 | 121.91 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 215 | 121.92 | temperature | 30.0 | 90 | > th | dose independent | rect. | 11 | 2 |
| 217 | 121.93 | wind | 1.0 | 30 | > th | dose dependent | rect. | 22 | 1 |
| 240 | 122.04 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 267 | 122.16 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 271 | 122.17 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 22 | 1 |
| 295 | 122.29 | temperature | 30.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 332 | 122.35 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 333 | 122.35 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 365 | 122.46 | temperature | 30.0 | 10 | > th | dose independent | rect. | 16 | 20 |
| 417 | 122.56 | temperature | 30.0 | 30 | > th | dose independent | sin | 7 | NA |
| 429 | 122.62 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 460 | 122.69 | temperature | 30.0 | 10 | > th | dose independent | rect. | 14 | 22 |
| 462 | 122.70 | temperature | 20.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 533 | 122.80 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 9 | 8 |
| 542 | 122.84 | wind | 1.0 | 10 | < th | dose independent | rect. | 5 | 9 |
| 545 | 122.87 | wind | 1.0 | 10 | < th | dose independent | rect. | 5 | 11 |
| 563 | 122.92 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 2 | 1 |
| 567 | 122.92 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 2 | 1 |
| 594 | 122.99 | wind | 9.0 | 30 | < th | dose independent | rect. | 23 | 23 |
| 596 | 123.00 | temperature | 30.0 | 30 | < th | dose independent | sin | 6 | NA |
| 603 | 123.05 | humidity | 80.0 | 10 | > th | dose independent | rect. | 9 | 8 |
| 641 | 123.20 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 14 | 23 |
| 644 | 123.21 | radiation | 1.0 | 720 | > th | dose independent | rect. | 4 | 7 |
| 669 | 123.29 | wind | 1.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 689 | 123.37 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 8 |
| 690 | 123.37 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 5 | 6 |
| 692 | 123.37 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 8 |
| 707 | 123.42 | wind | 1.0 | 10 | > th | dose independent | sin | 23 | NA |
| 717 | 123.46 | humidity | 90.0 | 720 | < th | dose independent | rect. | 4 | 1 |
| 730 | 123.50 | radiation | 1.0 | 720 | > th | dose independent | sin | 7 | NA |
| 731 | 123.50 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 11 | 3 |
| 871 | 123.67 | radiation | 1.0 | 720 | < th | dose independent | rect. | 1 | 10 |
| 886 | 123.69 | wind | 1.0 | 10 | < th | dose dependent | rect. | 5 | 9 |
| 887 | 123.69 | wind | 1.0 | 10 | < th | dose dependent | rect. | 5 | 11 |
| 899 | 123.70 | radiation | 1.0 | 720 | < th | dose independent | rect. | 5 | 6 |
| 935 | 123.70 | humidity | 80.0 | 10 | > th | dose independent | rect. | 9 | 19 |
| 952 | 123.73 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 10 | 6 |