Os11g0644700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0644700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1094.39 | 1.55 | 9.43 | -8.68 | 1.31 | 5.49 | -1.81 | -18.3 | -1.8 | 15 | 26.06 | 1219 | 8.92 | -- |
| 1170.2 | 1.59 | 8.95 | -4.45 | 1.32 | 3.57 | -0.274 | -- | -0.989 | 14.5 | 26.17 | 1194 | 9.17 | -- |
| 1101.94 | 1.55 | 9.41 | -8.58 | 1.32 | 5.52 | -- | -17.9 | -1.74 | 14.3 | 26.2 | 1201 | 9.09 | -- |
| 1167.95 | 1.59 | 8.92 | -4.67 | 1.32 | 3.66 | -- | -- | -0.94 | 14.3 | 26.34 | 1171 | 8.72 | -- |
| 1164.02 | 1.59 | 9.47 | -8.74 | -- | 5.09 | -- | -17.3 | -2.1 | -- | 25.59 | 1607 | 8.58 | -- |
| 1648.86 | 1.9 | 8.94 | -3.7 | 0.316 | -- | -3.54 | -- | -0.992 | 17.1 | -- | -- | -- | -- |
| 1669.29 | 1.91 | 8.93 | -3.7 | 0.506 | -- | -- | -- | -1.01 | 13.3 | -- | -- | -- | -- |
| 1243.76 | 1.64 | 8.92 | -4.65 | -- | 3.22 | -- | -- | -0.924 | -- | 26.7 | 1308 | 9.3 | -- |
| 1711.4 | 1.93 | 8.77 | -- | 1.12 | 2.86 | -- | -- | -0.296 | 13.8 | 27.4 | 1147 | 7.79 | -- |
| 1685.09 | 1.92 | 8.94 | -3.72 | -- | -- | -- | -- | -1.02 | -- | -- | -- | -- | -- |
| 2029.47 | 2.11 | 8.84 | -- | 0.571 | -- | -- | -- | -0.594 | 13.5 | -- | -- | -- | -- |
| 1775.77 | 1.96 | 8.78 | -- | -- | 2.45 | -- | -- | -0.259 | -- | 27.98 | 1277 | 7.68 | -- |
| 2049.43 | 2.11 | 8.85 | -- | -- | -- | -- | -- | -0.604 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1125.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 3 | 1127.28 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 7 | 1128.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 21 | 1133.37 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 28 | 1134.96 | wind | 7 | 43200 | > th | dose dependent | rect. | 8 | 13 |
| 32 | 1135.64 | wind | 7 | 43200 | > th | dose dependent | sin | 22 | NA |
| 36 | 1136.24 | wind | 7 | 43200 | > th | dose dependent | rect. | 12 | 21 |
| 44 | 1137.06 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 16 |
| 51 | 1137.49 | temperature | 25 | 1440 | > th | dose dependent | sin | 15 | NA |
| 64 | 1138.37 | wind | 7 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 66 | 1138.44 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 68 | 1138.49 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 72 | 1138.72 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 22 |
| 92 | 1139.54 | wind | 7 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 113 | 1140.41 | wind | 7 | 43200 | > th | dose independent | rect. | 23 | 19 |
| 163 | 1142.19 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 15 |
| 202 | 1143.05 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 19 |
| 219 | 1143.32 | wind | 7 | 43200 | < th | dose independent | rect. | 4 | 13 |
| 282 | 1144.56 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 11 |
| 316 | 1145.20 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 22 |
| 338 | 1145.54 | wind | 7 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 391 | 1146.64 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 22 |
| 398 | 1146.83 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 22 |
| 399 | 1146.83 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 23 |
| 406 | 1146.92 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 20 |
| 419 | 1147.12 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 456 | 1147.77 | wind | 7 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 504 | 1148.40 | wind | 7 | 43200 | < th | dose independent | sin | 0 | NA |
| 506 | 1148.41 | wind | 7 | 43200 | > th | dose independent | sin | 0 | NA |
| 520 | 1148.68 | wind | 7 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 524 | 1148.79 | wind | 7 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 532 | 1148.89 | wind | 7 | 43200 | > th | dose independent | no | NA | NA |
| 534 | 1148.93 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 560 | 1149.59 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 23 |
| 570 | 1149.77 | wind | 7 | 43200 | < th | dose independent | no | NA | NA |
| 578 | 1149.99 | wind | 7 | 43200 | > th | dose dependent | no | NA | NA |
| 627 | 1150.98 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 665 | 1151.82 | temperature | 30 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 698 | 1152.59 | temperature | 30 | 43200 | > th | dose dependent | rect. | 18 | 21 |
| 700 | 1152.63 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 703 | 1152.67 | temperature | 30 | 43200 | > th | dose dependent | rect. | 9 | 6 |
| 706 | 1152.70 | temperature | 30 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 777 | 1153.21 | wind | 7 | 43200 | < th | dose independent | rect. | 10 | 17 |
| 784 | 1153.34 | temperature | 30 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 785 | 1153.35 | temperature | 30 | 43200 | > th | dose dependent | sin | 6 | NA |
| 821 | 1153.92 | temperature | 30 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 881 | 1154.23 | temperature | 30 | 43200 | > th | dose dependent | rect. | 12 | 23 |
| 927 | 1154.52 | radiation | 10 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 931 | 1154.54 | temperature | 30 | 43200 | > th | dose dependent | no | NA | NA |