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Os11g0644500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.43 (0.0422) R2 : 0.82
β1 : -2.03 (0.155) R2dD : 0.0718 R2D : 0.0446
β2 : 3.38 (0.135) R2dC : 0.379 R2C : 0.589
β3 : 2.02 (0.154) R2dE : 0.104 R2E : 0.341
β4 : 3.09 (0.498) R2dD*C : 0.0148 R2D*C : 0.0125
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.917 (0.0901) R2dN8 : 0.0548 R2N8 : 0.0185
σ : 0.788
deviance : 286.48
__
_____
C
peak time of C : 6.71
E
wheather : precipitation
threshold : 0.4999
memory length : 281
response mode : < th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 14.9
open length of G : 22

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
285.26 0.794 7.43 -2.04 3.4 2 3.52 -0.893 -0.913 6.72 0.3309 281 14.9 22
286.48 0.788 7.43 -2.03 3.38 2.02 3.09 -- -0.917 6.71 0.4999 281 14.9 22
305.31 0.814 7.45 -2.03 3.4 2.01 -- 1.39 -0.944 6.59 0.4988 274 15.2 21.8
309.7 0.82 7.44 -2 3.4 1.99 -- -- -0.933 6.62 0.4995 274 15.1 21.8
425.61 0.961 7.53 -2.07 -- 4.39 -- 1.9 -0.898 -- 2.051 661 13.9 21.5
378.67 0.912 7.43 -2.16 4.48 -- 2.92 -- -0.993 6.29 -- -- -- --
399.37 0.936 7.44 -2.13 4.5 -- -- -- -1 6.23 -- -- -- --
393.78 0.924 7.39 -2.09 -- 4.7 -- -- -0.845 -- 1.064 580 15.5 19.6
415.8 0.95 7.42 -- 3.4 2.15 -- -- -0.77 6.58 0.4938 282 15.1 21.9
1448.12 1.78 7.52 -2.01 -- -- -- -- -0.906 -- -- -- -- --
518.8 1.07 7.39 -- 4.47 -- -- -- -0.767 6.26 -- -- -- --
475.24 1.02 7.48 -- -- 5.22 -- -- -0.711 -- 0.09317 579 15.7 19
1554.25 1.84 7.47 -- -- -- -- -- -0.683 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 285.98 precipitation 0.1 270 < th dose independent rect. 15 22
2 285.98 precipitation 0.1 270 < th dose dependent rect. 15 22
3 289.62 radiation 10.0 43200 < th dose dependent rect. 19 7
4 289.68 precipitation 0.1 270 < th dose independent rect. 16 20
5 289.68 precipitation 0.1 270 < th dose dependent rect. 16 20
6 290.12 precipitation 0.1 270 < th dose independent rect. 17 18
7 290.12 precipitation 0.1 270 < th dose dependent rect. 17 18
15 293.14 temperature 10.0 270 > th dose independent rect. 13 2
17 293.14 atmosphere 1010.0 270 < th dose independent rect. 13 2
19 293.14 temperature 10.0 270 > th dose independent rect. 15 22
20 293.22 radiation 30.0 10 < th dose dependent rect. 1 16
21 293.24 wind 9.0 270 < th dose independent rect. 13 2
22 293.35 precipitation 0.1 270 < th dose independent rect. 13 2
23 293.35 precipitation 0.1 270 < th dose dependent rect. 13 2
24 293.44 atmosphere 995.0 270 > th dose independent rect. 13 2
25 293.51 radiation 40.0 30 < th dose independent rect. 12 7
29 294.38 wind 9.0 270 < th dose independent rect. 16 20
30 294.39 wind 1.0 90 > th dose independent rect. 13 5
32 294.47 wind 9.0 270 < th dose independent rect. 15 22
33 294.54 wind 9.0 90 < th dose independent rect. 18 19
35 294.63 wind 9.0 270 < th dose independent rect. 12 4
37 294.91 temperature 10.0 270 > th dose independent rect. 11 6
38 294.91 atmosphere 1015.0 270 < th dose independent rect. 11 6
39 294.91 temperature 10.0 270 > th dose independent rect. 17 18
40 294.99 precipitation 0.1 270 < th dose independent rect. 12 4
41 294.99 precipitation 0.1 270 < th dose dependent rect. 12 4
42 295.00 temperature 10.0 270 > th dose independent rect. 12 4
44 295.00 atmosphere 1015.0 270 < th dose independent rect. 12 4
45 295.00 temperature 10.0 270 > th dose independent rect. 16 20
47 295.04 atmosphere 995.0 270 > th dose independent rect. 12 4
48 295.06 wind 9.0 270 < th dose independent rect. 11 6
49 295.07 wind 1.0 270 > th dose independent rect. 13 2
50 295.09 atmosphere 995.0 90 > th dose dependent rect. 13 5
52 295.13 atmosphere 995.0 270 > th dose independent rect. 11 6
65 295.57 precipitation 0.1 270 < th dose independent rect. 11 6
66 295.57 precipitation 0.1 270 < th dose dependent rect. 11 6
67 295.62 atmosphere 995.0 90 > th dose independent rect. 18 19
69 295.80 wind 1.0 270 > th dose independent rect. 11 6
76 296.48 humidity 50.0 270 > th dose independent rect. 17 18
77 296.51 precipitation 0.1 10 < th dose independent rect. 19 18
78 296.51 precipitation 0.1 10 < th dose dependent rect. 19 18
87 296.65 humidity 50.0 270 > th dose independent rect. 13 2
98 297.41 atmosphere 995.0 270 > th dose dependent rect. 13 2
114 298.70 humidity 50.0 270 > th dose independent rect. 12 4
119 298.85 wind 9.0 10 < th dose independent rect. 19 18
121 299.10 humidity 50.0 10 > th dose dependent rect. 1 16
122 299.12 humidity 90.0 270 < th dose independent rect. 13 2
128 299.28 atmosphere 995.0 10 > th dose dependent rect. 13 6
137 299.83 radiation 10.0 30 > th dose independent rect. 6 8
150 299.87 temperature 10.0 10 > th dose independent rect. 13 6
152 299.87 atmosphere 1010.0 10 < th dose independent rect. 13 6
154 299.87 temperature 10.0 10 > th dose independent rect. 19 18
155 299.87 atmosphere 995.0 10 > th dose independent rect. 19 18
158 300.01 wind 9.0 10 < th dose independent rect. 13 6
159 300.25 precipitation 0.1 10 < th dose independent rect. 13 6
160 300.25 precipitation 0.1 10 < th dose dependent rect. 13 6
162 300.35 humidity 90.0 270 < th dose independent rect. 12 4
182 300.74 precipitation 0.1 270 < th dose independent rect. 3 9
183 300.74 precipitation 0.1 270 < th dose dependent rect. 3 9
190 301.01 radiation 1.0 270 > th dose independent rect. 17 20
194 301.10 radiation 20.0 10 < th dose independent rect. 1 17
209 301.71 wind 1.0 270 > th dose independent rect. 16 8
217 302.14 wind 1.0 30 > th dose dependent rect. 13 6
225 302.37 humidity 50.0 10 > th dose independent rect. 13 6
230 302.47 atmosphere 995.0 10 > th dose independent rect. 13 6
239 302.70 radiation 1.0 270 > th dose independent rect. 13 2
240 302.76 radiation 1.0 90 < th dose dependent rect. 16 9
250 303.04 radiation 20.0 90 < th dose dependent rect. 17 8
253 303.33 wind 1.0 90 > th dose independent rect. 18 7
258 303.52 wind 1.0 270 > th dose independent rect. 16 20
261 303.66 humidity 50.0 90 > th dose independent rect. 17 8
262 303.66 wind 1.0 270 > th dose independent rect. 17 18
271 303.76 temperature 10.0 90 > th dose independent rect. 18 7
273 303.76 radiation 20.0 90 < th dose independent rect. 18 7
276 303.76 temperature 10.0 90 > th dose independent rect. 1 17
277 303.76 atmosphere 1015.0 90 < th dose independent rect. 1 17
278 303.78 wind 9.0 90 < th dose independent rect. 18 7
291 303.90 temperature 10.0 1440 > th dose independent rect. 14 5
295 303.90 temperature 10.0 1440 > th dose independent rect. 19 19
298 303.90 atmosphere 995.0 1440 > th dose independent rect. 19 19
306 303.97 atmosphere 995.0 90 > th dose independent rect. 18 7
321 304.14 precipitation 0.1 90 < th dose independent rect. 18 7
322 304.14 precipitation 0.1 90 < th dose dependent rect. 18 7
331 304.28 humidity 60.0 10 > th dose independent rect. 18 7
345 304.34 wind 9.0 90 < th dose independent rect. 1 17
360 304.58 radiation 40.0 270 < th dose dependent rect. 22 10
383 305.02 temperature 10.0 270 > th dose independent rect. 16 8
384 305.02 radiation 40.0 270 < th dose independent rect. 16 8
391 305.11 radiation 1.0 270 > th dose independent rect. 12 5
402 305.25 precipitation 0.1 270 < th dose independent rect. 16 8
403 305.25 precipitation 0.1 270 < th dose dependent rect. 16 8
412 305.35 wind 9.0 270 < th dose independent rect. 16 8
429 305.52 humidity 90.0 90 < th dose independent rect. 18 19
439 305.67 atmosphere 995.0 270 > th dose independent rect. 24 16
470 306.23 temperature 30.0 90 < th dose independent rect. 13 5
472 306.23 humidity 50.0 90 > th dose dependent rect. 13 4
502 306.60 temperature 30.0 10 < th dose independent rect. 18 7
520 306.90 wind 9.0 270 < th dose independent rect. 3 9
522 306.92 temperature 10.0 270 > th dose independent rect. 3 9
523 306.92 atmosphere 995.0 270 > th dose independent rect. 3 9
524 306.92 atmosphere 1015.0 270 < th dose independent rect. 3 9
525 306.92 temperature 10.0 270 > th dose independent rect. 12 15
565 307.66 wind 9.0 270 < th dose independent rect. 12 15
567 307.67 radiation 40.0 90 < th dose dependent rect. 13 4
568 307.68 radiation 1.0 1440 < th dose dependent rect. 19 7
584 307.90 radiation 40.0 10 < th dose dependent rect. 12 6
606 308.11 radiation 20.0 10 < th dose dependent sin 2 NA
634 308.46 temperature 10.0 1440 > th dose independent rect. 19 7
637 308.46 temperature 30.0 1440 < th dose independent rect. 19 7
641 308.46 humidity 50.0 1440 > th dose independent rect. 19 7
643 308.46 atmosphere 995.0 1440 > th dose independent rect. 19 7
644 308.46 radiation 1.0 1440 < th dose independent rect. 19 7
664 308.46 temperature 10.0 1440 > th dose independent rect. 2 17
671 308.51 precipitation 0.1 90 < th dose independent rect. 1 17
672 308.51 precipitation 0.1 90 < th dose dependent rect. 1 17
675 308.52 wind 1.0 270 > th dose dependent rect. 13 2
676 308.52 temperature 10.0 270 > th dose dependent rect. 13 2
742 309.34 humidity 50.0 10 > th dose independent rect. 1 17
767 309.53 wind 9.0 270 < th dose dependent rect. 13 2
768 309.54 humidity 50.0 270 > th dose dependent rect. 13 1
777 309.57 humidity 50.0 10 > th dose dependent rect. 13 5
780 309.62 temperature 15.0 270 > th dose independent rect. 22 10
799 309.80 humidity 90.0 10 < th dose independent rect. 13 6
815 309.89 atmosphere 995.0 270 > th dose independent rect. 23 18
829 310.08 precipitation 0.1 270 < th dose independent rect. 7 15
830 310.08 precipitation 0.1 270 < th dose dependent rect. 7 15
847 310.28 temperature 10.0 270 > th dose dependent rect. 3 9
852 310.32 temperature 30.0 270 < th dose independent rect. 22 10
853 310.32 humidity 50.0 270 > th dose independent rect. 22 10
855 310.32 atmosphere 995.0 270 > th dose independent rect. 22 10
856 310.32 temperature 10.0 270 > th dose independent rect. 8 14
860 310.33 radiation 40.0 270 < th dose independent rect. 22 10
866 310.39 temperature 10.0 90 > th dose dependent rect. 18 19
882 310.50 wind 9.0 270 < th dose independent rect. 22 10
916 310.64 temperature 10.0 90 > th dose dependent rect. 13 5
930 310.76 wind 9.0 270 < th dose independent rect. 8 14
968 311.01 atmosphere 1015.0 90 < th dose independent rect. 18 19
974 311.11 radiation 40.0 30 < th dose independent rect. 1 17
980 311.15 humidity 50.0 270 > th dose independent rect. 24 16