Os11g0642900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0642900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 130.88 | 0.538 | 10.2 | 0.704 | 0.177 | -1.22 | 0.572 | -0.18 | -0.169 | 3.49 | 22.19 | 973 | -- | -- |
| 130.97 | 0.533 | 10.2 | 0.76 | 0.174 | -1.22 | 0.567 | -- | -0.156 | 3.6 | 22.17 | 967 | -- | -- |
| 131.63 | 0.534 | 10.2 | 0.721 | 0.189 | -1.23 | -- | -0.101 | -0.165 | 2.18 | 22.2 | 964 | -- | -- |
| 131.5 | 0.534 | 10.2 | 0.767 | 0.177 | -1.27 | -- | -- | -0.152 | 1.68 | 21.99 | 913 | -- | -- |
| 133.44 | 0.538 | 10.2 | 0.709 | -- | -1.2 | -- | -0.113 | -0.182 | -- | 22.09 | 889 | -- | -- |
| 192.51 | 0.65 | 10.3 | 0.321 | 0.135 | -- | 0.798 | -- | -0.56 | 6.08 | -- | -- | -- | -- |
| 193.91 | 0.652 | 10.3 | 0.33 | 0.147 | -- | -- | -- | -0.562 | 7.41 | -- | -- | -- | -- |
| 133.42 | 0.538 | 10.2 | 0.752 | -- | -1.22 | -- | -- | -0.176 | -- | 22 | 889 | -- | -- |
| 144.7 | 0.56 | 10.3 | -- | 0.174 | -1.06 | -- | -- | -0.279 | 1.79 | 22.23 | 865 | -- | -- |
| 195.07 | 0.653 | 10.3 | 0.332 | -- | -- | -- | -- | -0.56 | -- | -- | -- | -- | -- |
| 196.78 | 0.656 | 10.3 | -- | 0.151 | -- | -- | -- | -0.599 | 7.26 | -- | -- | -- | -- |
| 146.45 | 0.564 | 10.3 | -- | -- | -1.02 | -- | -- | -0.288 | -- | 22.24 | 854 | -- | -- |
| 197.99 | 0.657 | 10.3 | -- | -- | -- | -- | -- | -0.596 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 135.66 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 3 | 135.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 4 | 135.94 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 19 |
| 12 | 136.50 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 23 | 136.81 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 49 | 137.36 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 51 | 137.47 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 75 | 137.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 76 | 137.78 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 84 | 137.84 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 129 | 138.30 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 142 | 138.38 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 146 | 138.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 153 | 138.45 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 5 |
| 164 | 138.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 169 | 138.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 17 |
| 172 | 138.60 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 218 | 138.90 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 274 | 139.21 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 300 | 139.33 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 301 | 139.34 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 495 | 140.39 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 578 | 140.83 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 678 | 141.42 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 749 | 141.82 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 14 |
| 820 | 142.17 | temperature | 20 | 720 | > th | dose independent | rect. | 19 | 20 |
| 822 | 142.19 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 831 | 142.21 | wind | 9 | 14400 | > th | dose dependent | rect. | 9 | 4 |
| 882 | 142.49 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 10 |
| 918 | 142.68 | wind | 9 | 14400 | < th | dose independent | rect. | 1 | 12 |
| 974 | 142.93 | wind | 9 | 14400 | < th | dose independent | rect. | 9 | 3 |