Os11g0642400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os11g0642400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.22 | 0.498 | 3.01 | 0.0145 | 0.0225 | -0.55 | 0.608 | 1.04 | 0.087 | 7.21 | 1.049 | 16 | -- | -- |
| 113 | 0.495 | 3 | 0.057 | 0.0324 | -0.445 | 0.557 | -- | 0.103 | 7.82 | 1.2 | 16 | -- | -- |
| 113.13 | 0.495 | 3.01 | 0.0276 | 0.0414 | -0.566 | -- | 0.994 | 0.0824 | 11.1 | 1.026 | 16 | -- | -- |
| 113.82 | 0.497 | 3 | 0.0655 | 0.0413 | -0.463 | -- | -- | 0.101 | 11.2 | 1.138 | 16 | -- | -- |
| 113.23 | 0.496 | 3.01 | 0.0277 | -- | -0.56 | -- | 0.987 | 0.0867 | -- | 1.035 | 16 | -- | -- |
| 118.42 | 0.51 | 3 | 0.12 | 0.132 | -- | 0.603 | -- | 0.0953 | 6.53 | -- | -- | -- | -- |
| 119.23 | 0.511 | 3 | 0.128 | 0.141 | -- | -- | -- | 0.0928 | 5.48 | -- | -- | -- | -- |
| 113.93 | 0.497 | 3 | 0.0656 | -- | -0.457 | -- | -- | 0.1 | -- | 1.138 | 16 | -- | -- |
| 113.93 | 0.497 | 3 | -- | 0.0416 | -0.473 | -- | -- | 0.0938 | 11.4 | 1.146 | 16 | -- | -- |
| 120.27 | 0.512 | 3 | 0.132 | -- | -- | -- | -- | 0.0962 | -- | -- | -- | -- | -- |
| 119.66 | 0.512 | 3 | -- | 0.143 | -- | -- | -- | 0.0786 | 5.44 | -- | -- | -- | -- |
| 114.04 | 0.497 | 3 | -- | -- | -0.465 | -- | -- | 0.0933 | -- | 1.128 | 16 | -- | -- |
| 120.73 | 0.513 | 3.01 | -- | -- | -- | -- | -- | 0.0816 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 97.65 | wind | 9.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 4 | 97.65 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 26 | 99.07 | wind | 9.0 | 90 | > th | dose independent | rect. | 17 | 9 |
| 75 | 99.84 | wind | 9.0 | 90 | > th | dose independent | sin | 12 | NA |
| 77 | 100.26 | wind | 9.0 | 90 | < th | dose independent | sin | 12 | NA |
| 80 | 100.70 | wind | 9.0 | 90 | > th | dose dependent | sin | 13 | NA |
| 234 | 106.78 | humidity | 70.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 245 | 107.66 | wind | 1.0 | 30 | < th | dose independent | rect. | 6 | 1 |
| 301 | 108.48 | wind | 9.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 422 | 109.15 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 423 | 109.27 | wind | 9.0 | 10 | > th | dose independent | sin | 12 | NA |
| 462 | 109.45 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 463 | 109.47 | temperature | 25.0 | 90 | > th | dose independent | rect. | 2 | 1 |
| 468 | 109.54 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 475 | 109.58 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 476 | 109.59 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 478 | 109.60 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 479 | 109.60 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 480 | 109.60 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 483 | 109.60 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 487 | 109.60 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 496 | 109.60 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 497 | 109.60 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 517 | 109.60 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 521 | 109.60 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 552 | 109.68 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 554 | 109.68 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 555 | 109.68 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 559 | 109.68 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 561 | 109.68 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 563 | 109.68 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 568 | 109.68 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 569 | 109.68 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 570 | 109.68 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 571 | 109.68 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 575 | 109.68 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 580 | 109.68 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 619 | 109.76 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 620 | 109.76 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 621 | 109.76 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 637 | 109.78 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 648 | 109.86 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 720 | 110.22 | wind | 9.0 | 10 | < th | dose independent | sin | 11 | NA |
| 775 | 110.72 | wind | 1.0 | 10 | < th | dose independent | rect. | 5 | 22 |
| 783 | 110.81 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 785 | 110.87 | wind | 7.0 | 10 | > th | dose dependent | rect. | 17 | 3 |
| 819 | 111.20 | wind | 9.0 | 10 | < th | dose independent | sin | 14 | NA |
| 895 | 111.55 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 896 | 111.57 | wind | 1.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 965 | 111.87 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 17 | 1 |
| 972 | 111.91 | wind | 1.0 | 10 | > th | dose independent | rect. | 18 | 23 |
| 990 | 112.02 | wind | 1.0 | 30 | < th | dose dependent | rect. | 6 | 1 |