Os11g0640700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os11g0640700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.84 | 0.338 | 7.94 | 0.705 | 0.46 | -0.981 | -0.382 | -0.0866 | -0.0849 | 1.06 | 25.27 | 202 | -- | -- |
| 51.84 | 0.335 | 7.94 | 0.699 | 0.473 | -0.971 | -0.402 | -- | -0.0857 | 1.04 | 25.4 | 182 | -- | -- |
| 52.41 | 0.337 | 7.94 | 0.716 | 0.475 | -0.965 | -- | -0.137 | -0.0888 | 1.04 | 25.53 | 181 | -- | -- |
| 52.47 | 0.337 | 7.94 | 0.706 | 0.485 | -0.979 | -- | -- | -0.0935 | 1.2 | 25.7 | 175 | -- | -- |
| 56.26 | 0.349 | 7.92 | 0.677 | -- | -1.18 | -- | -0.194 | -0.0618 | -- | 23.02 | 911 | -- | -- |
| 65.63 | 0.38 | 7.89 | 0.937 | 0.331 | -- | -0.424 | -- | 0.112 | 0.0104 | -- | -- | -- | -- |
| 66.41 | 0.382 | 7.89 | 0.953 | 0.333 | -- | -- | -- | 0.114 | 0.0844 | -- | -- | -- | -- |
| 56.12 | 0.349 | 7.93 | 0.66 | -- | -1.04 | -- | -- | -0.103 | -- | 25.25 | 886 | -- | -- |
| 64.5 | 0.374 | 7.98 | -- | 0.501 | -1.21 | -- | -- | -0.184 | 1.3 | 25.33 | 220 | -- | -- |
| 73.38 | 0.4 | 7.88 | 0.964 | -- | -- | -- | -- | 0.119 | -- | -- | -- | -- | -- |
| 90.37 | 0.445 | 7.92 | -- | 0.346 | -- | -- | -- | 0.00794 | 0.238 | -- | -- | -- | -- |
| 66.11 | 0.379 | 7.96 | -- | -- | -1.32 | -- | -- | -0.22 | -- | 25 | 931 | -- | -- |
| 97.89 | 0.462 | 7.91 | -- | -- | -- | -- | -- | 0.012 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.72 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 2 | 48.88 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 7 | 49.71 | wind | 3.0 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 9 | 49.82 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 10 | 49.85 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 11 | 49.85 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 17 | 50.02 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 3 |
| 19 | 50.04 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 23 | 50.07 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 34 | 50.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 35 | 50.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 36 | 50.34 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 41 | 50.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 44 | 50.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 45 | 50.43 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 20 | 11 |
| 60 | 50.52 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 69 | 50.59 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 93 | 50.70 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 106 | 50.75 | wind | 3.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 113 | 50.76 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 16 |
| 117 | 50.77 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 14 |
| 129 | 50.80 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 171 | 50.92 | wind | 3.0 | 14400 | > th | dose independent | rect. | 22 | 15 |
| 182 | 50.95 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 246 | 51.12 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 403 | 51.52 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 12 | 7 |
| 404 | 51.52 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 12 | 7 |
| 412 | 51.54 | atmosphere | 1015.0 | 4320 | < th | dose independent | rect. | 13 | 5 |
| 423 | 51.55 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 426 | 51.56 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 438 | 51.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 457 | 51.62 | atmosphere | 1015.0 | 4320 | > th | dose dependent | rect. | 11 | 8 |
| 479 | 51.65 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 600 | 51.84 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 601 | 51.85 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 638 | 51.91 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 4 | 12 |
| 662 | 51.95 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 684 | 51.98 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 709 | 52.00 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 721 | 52.02 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 731 | 52.04 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 734 | 52.05 | wind | 1.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 750 | 52.08 | atmosphere | 1015.0 | 4320 | > th | dose independent | rect. | 13 | 2 |
| 755 | 52.09 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 775 | 52.10 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 802 | 52.13 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 807 | 52.14 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 810 | 52.15 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 812 | 52.15 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 813 | 52.15 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 826 | 52.16 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 931 | 52.29 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 985 | 52.35 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 991 | 52.36 | temperature | 20.0 | 1440 | < th | dose dependent | sin | 1 | NA |