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Os11g0639300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF594 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.8 (0.0315) R2 : 0.912
β1 : 1.12 (0.139) R2dD : 0.02 R2D : -0.136
β2 : 2.23 (0.076) R2dC : 0.168 R2C : 0.0297
β3 : -1.69 (0.157) R2dE : 0.0375 R2E : -0.0624
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -3.48 (0.0729) R2dN8 : 0.731 R2N8 : 0.703
σ : 0.573
deviance : 151.5
__
_____
C
peak time of C : 14.8
E
wheather : temperature
threshold : 18.8
memory length : 3820
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
148.94 0.573 9.74 1.22 2.22 -0.97 -0.462 1.88 -3.42 14.8 20.5 2461 -- --
150.38 0.571 9.8 1.18 2.26 -1.65 -0.391 -- -3.48 14.8 18.8 3810 -- --
149.66 0.57 9.74 1.23 2.22 -0.967 -- 1.96 -3.42 14.9 20.48 2462 -- --
151.5 0.573 9.8 1.12 2.23 -1.69 -- -- -3.48 14.8 18.8 3820 -- --
429.24 0.965 9.7 1.62 -- -1.03 -- 2.63 -3.28 -- 22.2 1079 -- --
187.35 0.642 9.87 0.25 2.3 -- -0.813 -- -3.82 14.8 -- -- -- --
189.62 0.645 9.87 0.23 2.3 -- -- -- -3.82 14.8 -- -- -- --
436.71 0.973 9.79 1.21 -- -2.13 -- -- -3.47 -- 18.5 3882 -- --
168.05 0.604 9.85 -- 2.23 -1.01 -- -- -3.7 14.8 19 2455 -- --
495.56 1.04 9.89 0.132 -- -- -- -- -3.88 -- -- -- -- --
191.02 0.647 9.88 -- 2.29 -- -- -- -3.85 14.8 -- -- -- --
446.45 0.984 9.84 -- -- -1.59 -- -- -3.69 -- 18.33 2444 -- --
496.02 1.04 9.89 -- -- -- -- -- -3.9 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 143.57 radiation 10 4320 < th dose dependent rect. 23 6
3 145.12 radiation 1 14400 < th dose independent rect. 18 11
4 145.12 radiation 40 43200 < th dose dependent rect. 23 6
5 145.24 radiation 1 43200 > th dose dependent rect. 18 1
17 145.86 humidity 60 43200 > th dose independent rect. 18 1
19 146.14 radiation 40 43200 < th dose dependent rect. 18 10
22 146.44 humidity 60 43200 < th dose independent rect. 18 1
26 146.60 radiation 1 14400 < th dose independent rect. 18 1
29 146.64 radiation 1 14400 < th dose independent rect. 18 8
30 146.64 radiation 40 43200 < th dose dependent rect. 18 2
33 146.67 radiation 20 43200 < th dose independent rect. 23 7
38 146.74 humidity 90 14400 < th dose independent rect. 23 1
45 146.86 radiation 40 43200 < th dose dependent rect. 18 8
79 147.54 humidity 50 43200 < th dose independent rect. 16 1
82 147.63 humidity 50 43200 > th dose independent rect. 16 2
89 147.79 humidity 60 43200 < th dose dependent rect. 17 1
90 147.80 radiation 10 4320 > th dose dependent rect. 5 3
106 147.89 atmosphere 1005 270 > th dose dependent rect. 22 7
110 148.01 temperature 20 4320 < th dose independent rect. 18 5
112 148.05 radiation 30 4320 < th dose independent rect. 16 16
113 148.10 radiation 10 43200 < th dose independent rect. 17 13
122 148.33 temperature 20 4320 > th dose independent rect. 18 5
123 148.34 humidity 50 43200 < th dose dependent rect. 12 1
125 148.37 humidity 60 43200 > th dose independent rect. 17 4
141 148.50 radiation 30 43200 < th dose independent rect. 18 14
154 148.57 radiation 30 43200 < th dose independent rect. 6 2
172 148.73 radiation 1 14400 < th dose independent rect. 23 6
179 148.83 radiation 1 14400 < th dose dependent rect. 18 18
181 148.85 humidity 60 43200 < th dose dependent rect. 8 1
200 149.04 radiation 1 14400 < th dose dependent rect. 3 9
212 149.07 humidity 50 43200 < th dose dependent rect. 8 6
250 149.16 temperature 20 4320 < th dose dependent rect. 23 1
271 149.20 wind 1 43200 > th dose independent rect. 11 1
280 149.22 radiation 1 14400 < th dose dependent sin 8 NA
322 149.38 humidity 50 43200 < th dose dependent rect. 16 22
328 149.40 radiation 1 14400 < th dose independent rect. 18 15
336 149.43 radiation 1 14400 < th dose dependent rect. 6 2
356 149.47 wind 1 43200 < th dose dependent rect. 10 2
364 149.48 humidity 50 43200 < th dose dependent sin 2 NA
384 149.51 radiation 1 14400 < th dose independent rect. 18 18
421 149.56 radiation 30 43200 > th dose dependent rect. 7 1
449 149.57 humidity 50 43200 < th dose dependent rect. 11 22
450 149.58 radiation 1 14400 > th dose independent rect. 18 1
483 149.63 wind 9 43200 < th dose independent rect. 24 2
484 149.63 radiation 10 4320 < th dose independent rect. 17 13
485 149.63 humidity 50 43200 < th dose dependent rect. 11 11
524 149.69 atmosphere 1010 270 < th dose dependent rect. 17 13
532 149.71 wind 1 14400 > th dose independent rect. 23 2
572 149.74 humidity 50 43200 < th dose independent rect. 11 1
616 149.76 humidity 50 43200 < th dose dependent no NA NA
617 149.76 temperature 20 4320 < th dose dependent rect. 21 4
646 149.78 humidity 90 14400 > th dose independent rect. 23 1
667 149.81 temperature 25 4320 < th dose dependent rect. 17 2
672 149.84 humidity 70 43200 < th dose dependent rect. 17 5
703 149.91 humidity 70 43200 < th dose dependent rect. 12 1
748 150.02 humidity 50 43200 < th dose independent rect. 5 9
754 150.03 humidity 50 43200 < th dose independent rect. 21 17
759 150.04 radiation 40 43200 < th dose independent rect. 15 18
763 150.05 humidity 60 43200 > th dose independent rect. 18 20
775 150.07 temperature 20 4320 < th dose independent rect. 21 1
811 150.16 humidity 70 43200 > th dose independent rect. 2 10
820 150.17 humidity 70 43200 > th dose independent rect. 18 18
822 150.18 wind 3 43200 < th dose independent rect. 11 5
827 150.18 radiation 10 43200 > th dose dependent rect. 5 1
846 150.20 temperature 20 4320 > th dose independent rect. 18 1
854 150.20 humidity 70 43200 < th dose independent rect. 18 18
869 150.25 wind 3 43200 > th dose independent rect. 12 4
880 150.25 radiation 1 14400 < th dose dependent rect. 6 23
886 150.26 temperature 20 720 > th dose dependent rect. 3 10
887 150.27 humidity 50 43200 > th dose independent rect. 8 1
897 150.28 humidity 50 43200 > th dose independent rect. 20 18
902 150.28 radiation 1 14400 < th dose dependent rect. 3 16
940 150.30 radiation 1 14400 < th dose dependent no NA NA
978 150.32 humidity 70 43200 < th dose independent rect. 2 10
995 150.33 humidity 70 43200 < th dose dependent rect. 8 17
996 150.33 humidity 70 43200 < th dose dependent rect. 6 19