FiT-DB / Search/ Help/ Sample detail

Os11g0639000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0129) R2 : 0.953
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -2.6 (0.0271) R2dN8 : 1.23 R2N8 : 0.953
σ : 0.242
deviance : 26.89
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
15.69 0.186 10.7 -0.503 0.257 -0.116 -0.256 1.24 -2.65 4.16 0.3875 2874 -- --
15.83 0.185 10.7 -0.565 0.258 0.203 -0.249 -- -2.65 4.07 0.5001 2640 -- --
15.86 0.185 10.7 -0.485 0.257 -0.142 -- 1.28 -2.65 4.16 0.4496 2752 -- --
16.02 0.186 10.7 -0.564 0.257 0.202 -- -- -2.65 4.12 0.5 2599 -- --
19.37 0.205 10.7 -0.427 -- -0.259 -- 1.77 -2.65 -- 0.4346 2596 -- --
16.62 0.191 10.7 -0.505 0.264 -- -0.22 -- -2.66 4.07 -- -- -- --
16.76 0.192 10.7 -0.502 0.262 -- -- -- -2.66 4.06 -- -- -- --
19.62 0.206 10.7 -0.558 -- 0.223 -- -- -2.64 -- 0.5 2576 -- --
22.97 0.223 10.7 -- 0.268 -0.27 -- -- -2.61 3.86 1.4 660 -- --
20.51 0.212 10.7 -0.492 -- -- -- -- -2.65 -- -- -- -- --
23.41 0.226 10.7 -- 0.253 -- -- -- -2.61 4.09 -- -- -- --
26.35 0.239 10.7 -- -- -0.174 -- -- -2.61 -- 2.5 4330 -- --
26.89 0.242 10.7 -- -- -- -- -- -2.6 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 14.96 atmosphere 995.0 30 > th dose independent rect. 3 23
3 15.12 temperature 30.0 30 < th dose dependent rect. 2 1
4 15.12 radiation 1.0 43200 < th dose dependent rect. 3 1
5 15.12 radiation 20.0 90 < th dose dependent rect. 5 22
6 15.15 atmosphere 1000.0 30 > th dose independent rect. 2 1
7 15.15 atmosphere 1000.0 10 > th dose dependent rect. 2 1
10 15.16 wind 5.0 30 < th dose independent rect. 2 1
16 15.17 temperature 10.0 30 > th dose independent rect. 2 1
18 15.17 temperature 25.0 30 < th dose independent rect. 2 1
20 15.17 humidity 50.0 30 > th dose independent rect. 2 1
24 15.17 atmosphere 1010.0 30 < th dose independent rect. 2 1
26 15.17 radiation 1.0 30 < th dose independent rect. 2 1
31 15.17 precipitation 0.1 30 < th dose independent rect. 2 1
32 15.17 temperature 10.0 30 > th dose independent rect. 3 23
33 15.17 wind 7.0 30 < th dose dependent rect. 2 1
35 15.17 humidity 50.0 30 > th dose dependent rect. 2 1
40 15.17 radiation 1.0 30 < th dose dependent rect. 2 1
45 15.17 precipitation 0.1 30 < th dose dependent rect. 2 1
54 15.20 temperature 10.0 30 > th dose dependent rect. 2 1
55 15.21 wind 1.0 30 > th dose independent rect. 2 1
61 15.21 atmosphere 1015.0 30 < th dose dependent rect. 2 1
105 15.29 radiation 20.0 90 < th dose dependent rect. 6 17
114 15.36 wind 9.0 1440 < th dose independent rect. 3 1
115 15.36 temperature 10.0 1440 > th dose independent rect. 3 1
118 15.36 temperature 30.0 1440 < th dose independent rect. 3 1
122 15.36 humidity 50.0 1440 > th dose independent rect. 3 1
131 15.36 atmosphere 995.0 1440 > th dose independent rect. 3 1
132 15.36 radiation 1.0 1440 < th dose independent rect. 3 1
152 15.36 wind 9.0 30 < th dose independent rect. 3 23
153 15.36 temperature 10.0 1440 > th dose independent rect. 4 23
157 15.36 radiation 1.0 1440 < th dose dependent rect. 3 1
170 15.36 humidity 70.0 10 > th dose dependent rect. 6 15
172 15.37 humidity 80.0 10 > th dose independent rect. 6 15
179 15.38 radiation 10.0 90 < th dose independent rect. 5 22
182 15.39 precipitation 0.1 4320 > th dose dependent rect. 3 3
191 15.41 radiation 30.0 43200 < th dose dependent rect. 23 1
193 15.42 radiation 10.0 90 < th dose independent rect. 6 17
196 15.43 precipitation 0.1 4320 < th dose independent rect. 4 2
199 15.43 precipitation 0.1 4320 < th dose dependent rect. 4 2
202 15.44 precipitation 0.1 4320 > th dose independent rect. 4 2
206 15.44 humidity 80.0 10 > th dose independent rect. 6 17
214 15.45 humidity 70.0 10 > th dose dependent rect. 6 17
234 15.48 precipitation 0.1 4320 > th dose independent rect. 3 5
235 15.48 precipitation 0.1 4320 < th dose independent rect. 3 5
238 15.48 precipitation 0.1 4320 < th dose dependent rect. 3 5
265 15.50 precipitation 0.1 4320 > th dose dependent rect. 3 11
272 15.51 humidity 70.0 10 > th dose dependent rect. 6 12
275 15.51 precipitation 0.1 4320 > th dose dependent rect. 3 14
291 15.52 radiation 40.0 270 < th dose dependent rect. 5 14
300 15.53 precipitation 0.1 4320 > th dose independent rect. 3 14
301 15.53 precipitation 0.1 4320 < th dose independent rect. 3 14
315 15.53 precipitation 0.1 4320 < th dose dependent rect. 3 14
319 15.54 precipitation 0.1 4320 > th dose independent rect. 3 11
320 15.54 precipitation 0.1 4320 < th dose independent rect. 3 11
322 15.54 radiation 1.0 270 < th dose independent rect. 5 12
326 15.54 precipitation 0.1 4320 < th dose dependent rect. 3 11
379 15.58 precipitation 0.1 4320 > th dose dependent sin 3 NA
392 15.59 humidity 80.0 30 < th dose independent rect. 8 10
395 15.59 atmosphere 995.0 90 > th dose independent rect. 5 18
404 15.60 radiation 10.0 90 > th dose independent sin 20 NA
405 15.60 precipitation 0.1 4320 > th dose independent sin 3 NA
406 15.60 precipitation 0.1 4320 < th dose independent sin 3 NA
409 15.60 precipitation 0.1 4320 > th dose independent rect. 1 16
413 15.60 precipitation 0.1 4320 < th dose dependent sin 3 NA
415 15.60 radiation 1.0 270 < th dose dependent rect. 5 12
424 15.60 humidity 50.0 30 > th dose dependent rect. 5 23
429 15.61 humidity 80.0 90 < th dose independent rect. 11 6
437 15.61 radiation 20.0 90 < th dose dependent sin 20 NA
447 15.62 wind 1.0 4320 > th dose independent rect. 23 3
448 15.62 radiation 20.0 14400 < th dose independent rect. 24 6
455 15.62 radiation 10.0 90 > th dose independent rect. 10 23
457 15.62 humidity 70.0 10 > th dose dependent rect. 6 10
470 15.63 humidity 80.0 10 > th dose independent sin 22 NA
477 15.63 precipitation 0.1 14400 > th dose dependent rect. 17 3
480 15.63 radiation 20.0 90 < th dose dependent rect. 11 12
487 15.63 temperature 10.0 90 > th dose dependent rect. 23 18
489 15.64 radiation 1.0 270 < th dose independent rect. 5 14
493 15.64 precipitation 0.1 30 < th dose independent rect. 3 23
495 15.64 temperature 20.0 30 > th dose dependent rect. 23 3
509 15.64 precipitation 0.1 30 < th dose dependent rect. 3 23
517 15.65 precipitation 0.1 4320 < th dose independent rect. 1 19
519 15.65 radiation 20.0 30 < th dose dependent sin 18 NA
538 15.65 precipitation 0.1 4320 < th dose dependent rect. 1 19
546 15.66 precipitation 0.1 4320 > th dose independent rect. 7 1
549 15.66 humidity 80.0 10 < th dose independent rect. 11 7
565 15.66 precipitation 0.1 4320 > th dose dependent rect. 7 1
580 15.67 wind 1.0 720 < th dose independent rect. 22 3
581 15.67 precipitation 0.1 14400 > th dose independent rect. 17 3
583 15.67 precipitation 0.1 14400 < th dose independent rect. 17 3
584 15.67 atmosphere 1000.0 90 > th dose independent rect. 23 6
585 15.67 radiation 10.0 90 > th dose independent rect. 11 6
586 15.67 humidity 80.0 10 > th dose independent rect. 6 8
596 15.67 humidity 70.0 30 > th dose dependent sin 22 NA
600 15.67 wind 1.0 720 < th dose dependent rect. 22 3
601 15.67 wind 1.0 4320 < th dose dependent rect. 22 3
604 15.67 precipitation 0.1 14400 < th dose dependent rect. 17 3
605 15.67 humidity 90.0 4320 > th dose dependent rect. 6 4
628 15.68 wind 1.0 4320 < th dose independent rect. 23 3
636 15.68 radiation 10.0 90 < th dose independent rect. 11 12
678 15.69 wind 1.0 43200 > th dose independent rect. 1 1
680 15.69 precipitation 0.1 4320 < th dose independent rect. 7 1
684 15.69 humidity 80.0 10 > th dose independent rect. 6 6
707 15.69 atmosphere 995.0 90 > th dose independent rect. 5 16
711 15.69 atmosphere 1005.0 10 > th dose independent rect. 6 17
716 15.69 atmosphere 995.0 30 > th dose independent rect. 23 23
722 15.69 precipitation 0.1 4320 < th dose dependent rect. 7 1
727 15.69 humidity 90.0 90 < th dose dependent rect. 11 6
728 15.69 humidity 70.0 10 > th dose dependent rect. 6 8
766 15.70 radiation 40.0 270 < th dose independent rect. 5 15
772 15.70 humidity 70.0 10 > th dose dependent rect. 6 4
802 15.71 wind 9.0 1440 < th dose independent rect. 23 1
803 15.71 temperature 10.0 1440 > th dose independent rect. 23 1
806 15.71 temperature 30.0 1440 < th dose independent rect. 23 1
810 15.71 humidity 50.0 1440 > th dose independent rect. 23 1
820 15.71 atmosphere 995.0 1440 > th dose independent rect. 23 1
821 15.71 radiation 1.0 1440 < th dose independent rect. 23 1
845 15.71 atmosphere 1015.0 90 < th dose independent rect. 23 6
846 15.71 wind 1.0 4320 > th dose independent rect. 18 8
872 15.71 temperature 10.0 1440 > th dose independent rect. 24 23
877 15.71 radiation 1.0 1440 < th dose dependent rect. 23 1
922 15.72 atmosphere 995.0 10 > th dose independent rect. 6 17
939 15.72 precipitation 0.1 14400 > th dose dependent rect. 13 7
962 15.73 temperature 25.0 30 > th dose independent rect. 22 1
963 15.73 humidity 90.0 30 < th dose independent rect. 22 1
967 15.73 precipitation 0.1 1440 > th dose independent rect. 24 6
970 15.73 precipitation 0.1 1440 < th dose independent rect. 24 6
992 15.73 precipitation 0.1 4320 > th dose dependent rect. 16 1
1000 15.73 precipitation 0.1 1440 < th dose dependent rect. 24 6