FiT-DB / Search/ Help/ Sample detail

Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0638700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.37 (0.0251) R2 : 0.00327
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0645 (0.0527) R2dN8 : 0.00422 R2N8 : 0.00327
σ : 0.472
deviance : 102.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
73.83 0.404 3.41 0.266 0.176 2.5 -0.0306 9.84 -0.056 7.83 1.3 31 2 0.998
77.84 0.414 3.39 0.111 0.177 1.71 -0.0285 -- -0.0571 7.62 5.683 7 2.33 1.09
73.83 0.4 3.41 0.266 0.176 2.5 -- 9.83 -0.056 7.9 1.282 31 2 0.998
77.85 0.414 3.39 0.111 0.177 1.71 -- -- -0.0571 7.66 6.695 11 2.33 1.09
75.52 0.405 3.41 0.265 -- 2.5 -- 9.65 -0.0566 -- 1.21 31 2 0.998
98.44 0.465 3.37 0.11 0.246 -- -0.333 -- 0.0702 5.64 -- -- -- --
98.7 0.465 3.36 0.109 0.245 -- -- -- 0.0718 5.94 -- -- -- --
79.53 0.417 3.4 0.113 -- 1.74 -- -- -0.0565 -- 6.695 11 2.33 1.09
78.17 0.414 3.4 -- 0.178 1.71 -- -- -0.0694 7.62 7.224 15 2.31 1.12
101.8 0.471 3.37 0.116 -- -- -- -- 0.0774 -- -- -- -- --
99.01 0.465 3.37 -- 0.246 -- -- -- 0.0597 5.92 -- -- -- --
79.87 0.418 3.4 -- -- 1.74 -- -- -0.0691 -- 6.695 11 2.33 1.09
102.15 0.472 3.37 -- -- -- -- -- 0.0645 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 74.06 wind 1.0 30 < th dose independent rect. 2 1
2 74.08 wind 3.0 30 < th dose dependent rect. 2 1
3 74.11 atmosphere 1015.0 30 < th dose dependent rect. 2 1
7 74.15 atmosphere 1005.0 30 > th dose dependent rect. 2 1
9 74.17 temperature 25.0 30 < th dose independent rect. 2 1
10 74.19 temperature 10.0 30 > th dose dependent rect. 2 1
15 74.22 temperature 10.0 30 > th dose independent rect. 2 1
18 74.22 humidity 50.0 30 > th dose independent rect. 2 1
21 74.22 atmosphere 995.0 30 > th dose independent rect. 2 1
22 74.22 atmosphere 1010.0 30 < th dose independent rect. 2 1
24 74.22 radiation 1.0 30 < th dose independent rect. 2 1
29 74.22 precipitation 0.1 30 < th dose independent rect. 2 1
30 74.22 temperature 10.0 30 > th dose independent rect. 3 23
31 74.22 radiation 1.0 30 < th dose dependent rect. 2 1
36 74.22 precipitation 0.1 30 < th dose dependent rect. 2 1
38 74.25 humidity 50.0 30 > th dose dependent rect. 2 1
47 74.47 temperature 30.0 30 < th dose dependent rect. 2 1
48 74.53 atmosphere 1005.0 30 > th dose independent rect. 2 1
53 74.77 wind 9.0 30 < th dose independent rect. 3 23
64 75.27 wind 1.0 30 > th dose independent rect. 2 1
108 78.96 atmosphere 995.0 30 > th dose independent rect. 3 23
113 80.99 precipitation 0.1 30 < th dose independent rect. 3 23
114 80.99 precipitation 0.1 30 < th dose dependent rect. 3 23
124 82.11 temperature 25.0 90 > th dose dependent rect. 1 3
132 83.45 radiation 1.0 43200 < th dose dependent rect. 3 1
141 84.13 wind 9.0 1440 < th dose independent rect. 3 1
142 84.13 temperature 10.0 1440 > th dose independent rect. 3 1
145 84.13 temperature 30.0 1440 < th dose independent rect. 3 1
149 84.13 humidity 50.0 1440 > th dose independent rect. 3 1
158 84.13 atmosphere 995.0 1440 > th dose independent rect. 3 1
159 84.13 radiation 1.0 1440 < th dose independent rect. 3 1
179 84.13 temperature 10.0 1440 > th dose independent rect. 4 23
182 84.13 radiation 1.0 1440 < th dose dependent rect. 3 1
202 84.41 humidity 50.0 30 > th dose independent rect. 3 23
238 86.64 humidity 90.0 90 < th dose independent rect. 2 1
269 87.12 temperature 10.0 720 > th dose independent rect. 15 8
270 87.12 temperature 10.0 720 > th dose independent rect. 23 16
272 87.35 temperature 10.0 720 > th dose independent rect. 3 8
273 87.35 atmosphere 995.0 720 > th dose independent rect. 3 8
274 87.35 temperature 10.0 720 > th dose independent rect. 11 16
275 87.39 atmosphere 1015.0 30 < th dose independent rect. 3 23
277 87.59 wind 9.0 720 < th dose independent rect. 3 8
286 87.87 atmosphere 1015.0 720 < th dose independent rect. 3 8
295 88.07 precipitation 0.1 720 < th dose independent rect. 15 8
296 88.07 precipitation 0.1 720 < th dose dependent rect. 15 8
299 88.18 atmosphere 995.0 720 > th dose independent rect. 23 16
301 88.25 wind 9.0 30 < th dose dependent rect. 3 23
309 88.61 radiation 40.0 720 < th dose independent rect. 15 8
315 88.71 humidity 50.0 720 > th dose independent rect. 3 8
329 89.13 precipitation 0.1 720 < th dose independent rect. 11 16
330 89.13 precipitation 0.1 720 < th dose dependent rect. 11 16
336 89.23 wind 1.0 30 > th dose dependent rect. 2 1
338 89.28 humidity 90.0 90 < th dose independent rect. 1 4
341 89.47 atmosphere 1015.0 1440 < th dose independent rect. 3 1
352 89.81 wind 9.0 720 < th dose independent rect. 15 8
359 89.96 temperature 10.0 30 > th dose dependent rect. 3 23
392 90.10 temperature 30.0 30 < th dose independent rect. 3 23
397 90.17 wind 1.0 10 < th dose independent rect. 13 14
410 90.32 wind 1.0 10 < th dose independent rect. 17 10
415 90.37 wind 1.0 10 < th dose independent rect. 21 6
423 90.44 wind 9.0 720 < th dose independent rect. 23 16
445 90.87 precipitation 0.1 720 < th dose independent rect. 3 8
446 90.87 precipitation 0.1 720 < th dose dependent rect. 3 8
461 91.03 wind 1.0 10 < th dose independent rect. 8 19
481 91.19 atmosphere 995.0 30 > th dose dependent rect. 3 23
483 91.24 radiation 40.0 30 < th dose independent rect. 3 23
490 91.29 precipitation 0.1 720 < th dose independent rect. 23 16
492 91.29 precipitation 0.1 720 < th dose dependent rect. 23 16
493 91.29 radiation 40.0 30 < th dose dependent rect. 3 23
501 91.39 humidity 50.0 30 > th dose dependent rect. 3 23
503 91.42 wind 1.0 720 > th dose independent rect. 15 8
504 91.42 radiation 10.0 30 < th dose independent rect. 3 23
507 91.45 radiation 20.0 30 < th dose dependent rect. 3 23
535 91.69 atmosphere 1000.0 10 > th dose independent rect. 16 10
536 91.70 humidity 90.0 10 > th dose independent rect. 24 3
541 91.77 humidity 50.0 720 > th dose independent rect. 23 16
563 91.92 atmosphere 995.0 720 > th dose independent rect. 15 8
588 91.99 atmosphere 995.0 720 > th dose independent rect. 11 16
618 92.17 temperature 25.0 720 > th dose dependent rect. 4 4
636 92.27 radiation 1.0 10 < th dose dependent rect. 2 14
645 92.30 radiation 30.0 10 < th dose dependent rect. 16 10
663 92.39 radiation 10.0 10 < th dose independent rect. 16 10
664 92.39 precipitation 0.1 10 < th dose independent rect. 2 14
665 92.39 precipitation 0.1 10 < th dose dependent rect. 2 14
666 92.41 humidity 50.0 30 > th dose independent rect. 16 10
668 92.41 temperature 25.0 30 > th dose dependent rect. 16 19
672 92.43 wind 9.0 10 < th dose independent rect. 16 10
680 92.45 radiation 30.0 10 < th dose independent rect. 16 10
681 92.45 humidity 80.0 4320 < th dose dependent rect. 1 1
684 92.46 humidity 50.0 10 > th dose independent rect. 2 14
687 92.47 radiation 1.0 10 < th dose dependent rect. 2 12
694 92.50 temperature 10.0 10 > th dose independent rect. 16 10
696 92.50 temperature 10.0 10 > th dose independent rect. 2 14
698 92.50 atmosphere 1015.0 10 < th dose independent rect. 2 14
703 92.53 humidity 90.0 1440 > th dose independent rect. 2 1
709 92.56 precipitation 0.1 10 < th dose independent rect. 16 10
711 92.56 precipitation 0.1 10 < th dose dependent rect. 16 10
714 92.57 humidity 80.0 14400 < th dose dependent rect. 3 6
717 92.59 temperature 10.0 1440 > th dose independent rect. 17 10
720 92.59 radiation 30.0 1440 < th dose independent rect. 17 10
726 92.59 temperature 10.0 1440 > th dose independent rect. 3 14
732 92.61 atmosphere 1000.0 10 > th dose independent rect. 14 12
740 92.65 wind 9.0 720 < th dose independent rect. 11 16
745 92.66 radiation 1.0 10 < th dose independent rect. 2 12
756 92.68 radiation 1.0 10 < th dose dependent rect. 2 4
789 92.75 atmosphere 995.0 10 > th dose independent rect. 2 14
792 92.76 radiation 10.0 10 < th dose independent rect. 14 12
796 92.77 radiation 1.0 10 < th dose dependent rect. 2 10
806 92.80 radiation 1.0 10 < th dose dependent rect. 2 6
844 92.86 atmosphere 1000.0 720 > th dose independent rect. 14 1
854 92.88 wind 1.0 10 > th dose independent sin 16 NA
902 92.93 temperature 25.0 1440 < th dose independent rect. 1 1
915 92.96 radiation 1.0 10 < th dose independent rect. 2 10
918 92.96 radiation 40.0 10 < th dose dependent rect. 14 12
926 92.99 radiation 1.0 10 < th dose independent rect. 2 6
932 93.01 temperature 25.0 10 < th dose independent rect. 24 3
959 93.03 humidity 60.0 10 > th dose independent rect. 14 12
969 93.07 radiation 40.0 30 < th dose independent rect. 14 12
976 93.08 wind 3.0 30 < th dose dependent rect. 22 5
981 93.11 wind 9.0 720 < th dose dependent rect. 2 1
984 93.12 temperature 30.0 10 < th dose independent rect. 16 10
987 93.12 wind 9.0 10 < th dose independent rect. 2 14