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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0637200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Sorbitol transporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.09 (0.0185) R2 : 0.000515
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0189 (0.039) R2dN8 : 0.000665 R2N8 : 0.000515
σ : 0.348
deviance : 55.72
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
46.56 0.321 3.05 0.361 0.0324 -3.3 0.196 33.1 0.000577 9.25 34.24 75 -- --
52.63 0.34 3.08 0.0869 0.017 1.43 0.205 -- -0.00213 11.2 34.24 75 -- --
46.63 0.318 3.05 0.363 0.0462 -3.4 -- 34.3 -0.000187 6.41 34.25 76 -- --
48.25 0.324 3.09 0.0694 0.0359 1.75 -- -- -0.0092 9.75 35.11 94 -- --
46.75 0.318 3.05 0.368 -- -3.42 -- 34.3 0.000698 -- 34.22 76 -- --
55.15 0.348 3.09 0.0964 0.0254 -- 0.237 -- -0.00796 12.1 -- -- -- --
55.37 0.348 3.08 0.105 0.0316 -- -- -- -0.00733 9.45 -- -- -- --
48.19 0.323 3.09 0.0807 -- 1.8 -- -- -0.00821 -- 35.1 94 -- --
48.25 0.324 3.08 -- 0.0417 1.82 -- -- -0.0173 6.93 35.1 94 -- --
55.43 0.348 3.09 0.105 -- -- -- -- -0.00723 -- -- -- -- --
55.67 0.349 3.09 -- 0.0315 -- -- -- -0.019 9.2 -- -- -- --
48.36 0.324 3.09 -- -- 1.82 -- -- -0.00614 -- 35.1 95 -- --
55.72 0.348 3.09 -- -- -- -- -- -0.0189 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 46.62 humidity 50 270 < th dose independent rect. 13 2
2 46.62 humidity 50 270 < th dose dependent rect. 13 2
4 46.65 atmosphere 1000 270 < th dose independent rect. 12 1
6 46.66 atmosphere 1000 270 < th dose dependent rect. 12 1
9 46.92 atmosphere 1000 30 < th dose dependent rect. 13 3
38 48.42 temperature 30 10 > th dose dependent sin 14 NA
39 48.46 temperature 30 30 > th dose dependent rect. 12 6
40 48.47 temperature 30 30 > th dose dependent rect. 12 4
86 48.57 atmosphere 1000 90 < th dose dependent rect. 20 21
126 48.74 atmosphere 1000 10 < th dose dependent rect. 13 10
148 48.81 temperature 30 270 > th dose dependent rect. 11 2
170 49.03 atmosphere 1000 10 < th dose dependent rect. 13 17
186 49.11 atmosphere 1000 10 < th dose dependent rect. 13 15
188 49.11 temperature 30 270 > th dose dependent rect. 18 20
279 49.30 atmosphere 1000 90 < th dose dependent rect. 1 16
296 49.35 temperature 30 270 > th dose dependent sin 6 NA
306 49.39 atmosphere 1000 10 < th dose dependent sin 21 NA
321 49.43 atmosphere 1000 10 < th dose dependent rect. 2 21
371 49.46 atmosphere 1000 10 < th dose dependent rect. 10 13
403 49.51 atmosphere 1000 10 < th dose dependent rect. 18 23
406 49.52 temperature 30 1440 > th dose dependent rect. 8 1
447 49.56 atmosphere 1000 10 < th dose dependent rect. 10 20
449 49.57 temperature 30 14400 > th dose dependent rect. 8 1
465 49.58 temperature 30 14400 > th dose independent rect. 8 1
495 49.62 temperature 30 14400 < th dose independent rect. 7 2
496 49.62 temperature 30 14400 < th dose independent rect. 4 5
508 49.63 temperature 30 14400 < th dose independent rect. 20 13
710 49.78 atmosphere 1000 90 < th dose dependent rect. 5 12
713 49.78 atmosphere 1000 10 < th dose dependent rect. 8 22
770 49.81 temperature 30 90 > th dose dependent no NA NA
876 49.84 atmosphere 1000 720 < th dose dependent rect. 5 9
911 49.88 atmosphere 1000 10 < th dose dependent rect. 8 15
961 49.94 atmosphere 1000 10 < th dose dependent no NA NA
981 49.96 atmosphere 1000 10 < th dose dependent rect. 5 23