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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0637000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Sorbitol transporter.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.87 (0.0217) R2 : 0.00109
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0324 (0.0458) R2dN8 : 0.00141 R2N8 : 0.00109
σ : 0.409
deviance : 76.96
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
72.81 0.401 2.86 0.0556 0.0384 0.0883 0.644 1.11 -0.022 3.14 31.18 30 -- --
75.3 0.407 2.86 0.0838 0.129 0.0583 0.317 -- -0.0218 7.66 38.2 26 -- --
73.01 0.401 2.86 0.0715 0.126 0.0543 -- 0.972 -0.0238 8.03 40.67 29 -- --
75.51 0.407 2.86 0.0904 0.128 0.0677 -- -- -0.0225 8.05 40.67 29 -- --
73.68 0.402 2.86 0.0711 -- 0.0932 -- 1.01 -0.0226 -- 41.8 29 -- --
75.42 0.407 2.86 0.0839 0.139 -- 0.291 -- -0.0235 8.12 -- -- -- --
75.66 0.407 2.86 0.0929 0.138 -- -- -- -0.0233 8.57 -- -- -- --
76.33 0.409 2.86 0.0917 -- 0.104 -- -- -0.0207 -- 41.8 29 -- --
75.73 0.408 2.86 -- 0.128 0.0705 -- -- -0.0326 7.98 40.69 29 -- --
76.73 0.409 2.86 0.0934 -- -- -- -- -0.022 -- -- -- -- --
75.88 0.407 2.86 -- 0.138 -- -- -- -0.0336 8.52 -- -- -- --
76.56 0.409 2.86 -- -- 0.105 -- -- -0.0309 -- 41.82 29 -- --
76.96 0.409 2.87 -- -- -- -- -- -0.0324 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 66.98 temperature 25.0 30 > th dose dependent rect. 6 1
3 67.81 atmosphere 1010.0 30 < th dose independent rect. 6 1
5 67.96 radiation 10.0 30 < th dose independent rect. 6 1
7 68.83 wind 3.0 30 > th dose dependent rect. 6 1
10 69.14 atmosphere 1010.0 30 < th dose dependent rect. 6 1
13 69.68 humidity 90.0 30 < th dose dependent rect. 6 1
16 70.36 wind 1.0 90 < th dose dependent rect. 8 4
19 70.40 temperature 25.0 30 > th dose independent rect. 6 1
22 70.43 wind 3.0 30 > th dose independent rect. 6 1
23 70.45 radiation 1.0 10 > th dose dependent rect. 6 1
29 70.83 radiation 20.0 30 < th dose dependent rect. 6 1
35 71.13 wind 1.0 90 < th dose independent rect. 8 4
37 71.18 wind 9.0 1440 < th dose independent rect. 7 1
38 71.18 temperature 10.0 1440 > th dose independent rect. 7 1
42 71.18 temperature 30.0 1440 < th dose independent rect. 7 1
46 71.18 humidity 50.0 1440 > th dose independent rect. 7 1
51 71.18 atmosphere 995.0 1440 > th dose independent rect. 7 1
52 71.18 atmosphere 1015.0 1440 < th dose independent rect. 7 1
53 71.18 temperature 10.0 1440 > th dose independent rect. 8 23
56 71.24 humidity 90.0 30 < th dose independent rect. 6 1
58 71.30 humidity 90.0 720 > th dose dependent rect. 10 3
59 71.32 humidity 90.0 1440 > th dose independent rect. 10 3
64 71.41 atmosphere 1005.0 30 > th dose independent rect. 6 1
65 71.44 humidity 90.0 720 > th dose independent rect. 10 1
69 71.47 humidity 90.0 720 > th dose dependent rect. 10 1
73 71.50 humidity 80.0 30 > th dose independent rect. 6 1
77 71.52 wind 5.0 30 < th dose independent rect. 6 1
80 71.52 temperature 10.0 30 > th dose independent rect. 6 1
82 71.52 temperature 30.0 30 < th dose independent rect. 6 1
83 71.52 humidity 50.0 30 > th dose independent rect. 6 1
91 71.52 precipitation 0.1 1440 > th dose independent rect. 8 1
92 71.52 precipitation 0.1 30 < th dose independent rect. 6 1
93 71.52 temperature 10.0 30 > th dose independent rect. 7 23
94 71.52 precipitation 0.1 1440 > th dose dependent rect. 8 1
95 71.52 precipitation 0.1 30 < th dose dependent rect. 6 1
96 71.55 radiation 1.0 30 > th dose independent rect. 6 1
117 71.74 radiation 40.0 30 < th dose independent rect. 7 23
133 71.81 wind 1.0 30 < th dose independent rect. 6 1
138 71.84 humidity 50.0 30 > th dose dependent rect. 6 1
140 71.88 wind 9.0 30 < th dose dependent rect. 6 1
143 71.91 wind 9.0 30 < th dose independent rect. 7 23
149 72.02 atmosphere 995.0 30 > th dose dependent rect. 6 1
152 72.08 wind 1.0 14400 < th dose dependent rect. 2 3
153 72.09 wind 1.0 10 < th dose dependent rect. 11 1
162 72.20 wind 1.0 90 < th dose dependent rect. 11 1
172 72.37 radiation 30.0 30 < th dose independent sin 2 NA
173 72.39 radiation 30.0 30 > th dose independent rect. 15 22
207 72.47 wind 1.0 10 < th dose independent rect. 11 1
211 72.49 wind 5.0 43200 > th dose independent rect. 15 2
213 72.50 radiation 40.0 10 < th dose independent rect. 5 23
215 72.51 temperature 25.0 90 < th dose dependent rect. 10 1
219 72.52 wind 5.0 43200 < th dose independent rect. 15 2
220 72.53 atmosphere 1010.0 43200 < th dose dependent rect. 5 1
222 72.54 atmosphere 1005.0 43200 < th dose independent rect. 6 1
223 72.55 radiation 30.0 30 > th dose independent sin 6 NA
227 72.56 radiation 30.0 30 > th dose independent rect. 9 4
253 72.58 wind 5.0 43200 > th dose independent rect. 15 7
259 72.59 wind 5.0 43200 < th dose independent rect. 15 7
260 72.59 radiation 30.0 30 < th dose independent rect. 7 12
261 72.59 wind 5.0 43200 > th dose dependent rect. 15 1
263 72.59 radiation 20.0 30 > th dose dependent rect. 15 21
281 72.60 temperature 25.0 720 < th dose dependent rect. 10 1
286 72.61 atmosphere 1005.0 43200 > th dose independent rect. 6 1
300 72.62 radiation 20.0 30 > th dose dependent rect. 9 3
317 72.64 wind 5.0 43200 < th dose independent rect. 11 8
325 72.64 radiation 40.0 30 < th dose dependent rect. 7 23
328 72.65 wind 5.0 43200 > th dose independent rect. 11 8
330 72.65 temperature 25.0 720 < th dose dependent rect. 9 3
338 72.66 wind 1.0 90 < th dose independent rect. 11 1
370 72.67 wind 5.0 43200 < th dose independent rect. 14 17
375 72.67 temperature 25.0 720 < th dose dependent rect. 8 5
377 72.67 wind 5.0 43200 > th dose dependent rect. 15 7
387 72.68 wind 5.0 43200 < th dose independent rect. 14 15
395 72.68 wind 3.0 43200 > th dose dependent rect. 15 14
401 72.69 radiation 30.0 30 < th dose independent rect. 7 7
465 72.71 wind 5.0 43200 < th dose independent sin 18 NA
487 72.71 wind 5.0 43200 > th dose independent rect. 14 14
561 72.73 wind 5.0 43200 > th dose independent sin 18 NA
579 72.73 atmosphere 1010.0 43200 < th dose dependent sin 7 NA
655 72.75 radiation 30.0 30 > th dose dependent sin 7 NA
689 72.76 atmosphere 995.0 43200 > th dose dependent rect. 5 1
729 72.77 precipitation 0.1 1440 < th dose independent rect. 9 1
761 72.77 precipitation 0.1 1440 < th dose dependent rect. 9 1
771 72.77 wind 3.0 43200 > th dose dependent rect. 11 11
819 72.78 wind 3.0 43200 > th dose dependent sin 16 NA
840 72.78 wind 9.0 43200 < th dose dependent rect. 15 14
970 72.80 radiation 30.0 30 < th dose independent rect. 7 15
973 72.80 precipitation 0.1 30 < th dose independent rect. 7 23
991 72.80 wind 3.0 43200 > th dose dependent rect. 10 9