Os11g0635500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome P450 family protein.
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Os11g0635500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome P450 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 236.06 | 0.722 | 11.1 | -1.46 | 1.8 | -2.54 | -0.0949 | -3.9 | -0.38 | 10.5 | 1.201 | 4355 | -- | -- |
| 248.21 | 0.734 | 11.2 | -2.1 | 1.77 | -2.19 | 0.561 | -- | -0.429 | 10.3 | 1.69 | 4395 | -- | -- |
| 233.43 | 0.712 | 11.1 | -1.41 | 1.76 | -2.5 | -- | -3.83 | -0.382 | 10.5 | 1.44 | 4367 | -- | -- |
| 245.63 | 0.73 | 11.2 | -2.1 | 1.65 | -2.29 | -- | -- | -0.487 | 10.2 | 1.65 | 4397 | -- | -- |
| 364.42 | 0.894 | 11.1 | -1.84 | -- | -1.38 | -- | 0.422 | -0.0866 | -- | 1.44 | 4367 | -- | -- |
| 357.46 | 0.886 | 11 | -1.8 | 1.9 | -- | 0.0963 | -- | -0.0356 | 10.5 | -- | -- | -- | -- |
| 357.5 | 0.885 | 11 | -1.8 | 1.9 | -- | -- | -- | -0.0353 | 10.5 | -- | -- | -- | -- |
| 363.45 | 0.892 | 11.1 | -1.83 | -- | -1.38 | -- | -- | -0.0957 | -- | 1.682 | 4516 | -- | -- |
| 362.65 | 0.887 | 11.1 | -- | 1.81 | -1.82 | -- | -- | -0.356 | 10.4 | 2.321 | 4384 | -- | -- |
| 578.77 | 1.12 | 11.1 | -1.83 | -- | -- | -- | -- | -0.0427 | -- | -- | -- | -- | -- |
| 442.63 | 0.984 | 11 | -- | 1.91 | -- | -- | -- | 0.165 | 10.5 | -- | -- | -- | -- |
| 451.61 | 0.993 | 11.1 | -- | -- | -1.38 | -- | -- | 0.107 | -- | 1.682 | 4516 | -- | -- |
| 667.09 | 1.21 | 11 | -- | -- | -- | -- | -- | 0.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 219.42 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 2 | 220.24 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 3 | 220.82 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 4 | 221.19 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 5 | 221.48 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 7 | 221.56 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 12 | 5 |
| 9 | 221.66 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 10 |
| 11 | 221.71 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 15 | 221.81 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 22 | 221.93 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 29 | 222.37 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 14 | 20 |
| 35 | 222.71 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 46 | 223.02 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 53 | 223.21 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 54 | 223.21 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 63 | 223.59 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 65 | 223.60 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 7 |
| 66 | 223.61 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 10 |
| 82 | 223.91 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 89 | 224.06 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 13 |
| 91 | 224.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 102 | 224.36 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 104 | 224.37 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 105 | 224.41 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 11 | 11 |
| 114 | 224.48 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 8 |
| 154 | 224.91 | radiation | 40.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 170 | 225.12 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 14 |
| 180 | 225.33 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 187 | 225.38 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 190 | 225.43 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 10 |
| 192 | 225.45 | humidity | 90.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 193 | 225.46 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 11 | 12 |
| 198 | 225.52 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 205 | 225.54 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 14 |
| 228 | 225.64 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 20 |
| 232 | 225.66 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 8 | 15 |
| 238 | 225.71 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 250 | 225.85 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 8 | 2 |
| 282 | 225.99 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 293 | 226.09 | radiation | 30.0 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 316 | 226.28 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 332 | 226.42 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 337 | 226.44 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 340 | 226.46 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 22 | NA |
| 370 | 226.60 | humidity | 90.0 | 43200 | > th | dose independent | sin | 20 | NA |
| 420 | 226.99 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 7 | 21 |
| 421 | 226.99 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 468 | 227.21 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 483 | 227.24 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 16 | 15 |
| 504 | 227.32 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 10 | 10 |
| 542 | 227.45 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 545 | 227.47 | humidity | 90.0 | 43200 | < th | dose independent | no | NA | NA |
| 548 | 227.47 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 11 | 23 |
| 567 | 227.54 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 15 | 23 |
| 577 | 227.59 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 579 | 227.59 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 10 | 10 |
| 584 | 227.59 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 10 | 10 |
| 649 | 227.79 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 18 | 12 |
| 653 | 227.81 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 749 | 228.06 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 764 | 228.09 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 23 | 7 |
| 777 | 228.12 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 814 | 228.23 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 3 | 8 |
| 860 | 228.36 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 869 | 228.40 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 964 | 228.69 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 17 | 23 |
| 972 | 228.71 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 983 | 228.75 | humidity | 90.0 | 43200 | > th | dose independent | no | NA | NA |
| 989 | 228.75 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 14 | 19 |
| 995 | 228.76 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 23 |