Os11g0633800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os11g0633800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60.21 | 0.365 | 7.4 | 0.648 | 0.518 | 0.572 | 0.621 | 0.447 | 0.441 | 0.0843 | 70.47 | 1471 | -- | -- |
| 60.63 | 0.363 | 7.39 | 0.706 | 0.516 | 0.598 | 0.663 | -- | 0.46 | 0.0202 | 70.44 | 1478 | -- | -- |
| 61.85 | 0.366 | 7.4 | 0.61 | 0.516 | 0.558 | -- | 0.515 | 0.432 | 0.175 | 70.86 | 1478 | -- | -- |
| 62.39 | 0.368 | 7.4 | 0.691 | 0.51 | 0.586 | -- | -- | 0.456 | 0.137 | 70 | 1475 | -- | -- |
| 75.8 | 0.406 | 7.39 | 0.645 | -- | 0.703 | -- | 0.357 | 0.461 | -- | 71.95 | 1601 | -- | -- |
| 73.76 | 0.403 | 7.41 | 0.583 | 0.526 | -- | 0.526 | -- | 0.378 | 0.0169 | -- | -- | -- | -- |
| 74.94 | 0.405 | 7.41 | 0.562 | 0.524 | -- | -- | -- | 0.376 | 0.14 | -- | -- | -- | -- |
| 76.03 | 0.406 | 7.38 | 0.695 | -- | 0.723 | -- | -- | 0.476 | -- | 71.09 | 1598 | -- | -- |
| 74.07 | 0.401 | 7.41 | -- | 0.487 | 0.564 | -- | -- | 0.374 | 23.6 | 71.03 | 1628 | -- | -- |
| 92.25 | 0.449 | 7.4 | 0.579 | -- | -- | -- | -- | 0.383 | -- | -- | -- | -- | -- |
| 83.26 | 0.427 | 7.43 | -- | 0.532 | -- | -- | -- | 0.313 | 0.198 | -- | -- | -- | -- |
| 88.47 | 0.438 | 7.4 | -- | -- | 0.635 | -- | -- | 0.389 | -- | 71.72 | 1613 | -- | -- |
| 101.09 | 0.469 | 7.42 | -- | -- | -- | -- | -- | 0.319 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.68 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 6 | 60.02 | humidity | 70 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 9 | 60.11 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 22 | 60.16 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 22 |
| 54 | 60.26 | humidity | 70 | 1440 | > th | dose independent | no | NA | NA |
| 106 | 60.30 | humidity | 70 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 110 | 60.35 | humidity | 90 | 1440 | < th | dose dependent | rect. | 8 | 13 |
| 114 | 60.38 | humidity | 50 | 1440 | > th | dose dependent | rect. | 8 | 13 |
| 161 | 60.49 | humidity | 80 | 1440 | < th | dose dependent | rect. | 16 | 22 |
| 162 | 60.50 | humidity | 70 | 1440 | > th | dose independent | sin | 22 | NA |
| 169 | 60.51 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 11 |
| 212 | 60.52 | humidity | 80 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 279 | 60.57 | humidity | 80 | 1440 | < th | dose dependent | sin | 23 | NA |
| 331 | 60.62 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 344 | 60.63 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 349 | 60.65 | humidity | 70 | 1440 | < th | dose independent | no | NA | NA |
| 446 | 60.72 | humidity | 50 | 1440 | > th | dose dependent | sin | 22 | NA |
| 512 | 60.83 | radiation | 10 | 1440 | > th | dose independent | rect. | 13 | 20 |
| 543 | 60.89 | humidity | 70 | 1440 | < th | dose independent | sin | 21 | NA |
| 575 | 60.91 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 581 | 60.92 | wind | 3 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 630 | 61.01 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 22 |
| 699 | 61.11 | radiation | 20 | 1440 | < th | dose dependent | sin | 14 | NA |
| 726 | 61.14 | radiation | 10 | 1440 | > th | dose independent | sin | 13 | NA |
| 728 | 61.14 | humidity | 80 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 765 | 61.19 | humidity | 60 | 1440 | > th | dose dependent | rect. | 9 | 5 |
| 774 | 61.20 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 6 |
| 784 | 61.21 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 810 | 61.24 | wind | 3 | 43200 | > th | dose independent | rect. | 2 | 8 |
| 824 | 61.26 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 835 | 61.27 | radiation | 20 | 1440 | < th | dose dependent | rect. | 13 | 20 |
| 876 | 61.32 | humidity | 70 | 1440 | > th | dose independent | rect. | 23 | 16 |
| 913 | 61.35 | radiation | 20 | 1440 | < th | dose independent | rect. | 12 | 20 |
| 919 | 61.36 | wind | 3 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 947 | 61.39 | humidity | 70 | 1440 | > th | dose independent | sin | 10 | NA |
| 948 | 61.39 | wind | 3 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 976 | 61.40 | radiation | 20 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 986 | 61.41 | radiation | 1 | 1440 | > th | dose dependent | sin | 13 | NA |