Os11g0633600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Non-protein coding transcript, unclassifiable transcript.
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Os11g0633600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Non-protein coding transcript, unclassifiable transcript.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 242.03 | 0.731 | 3.22 | 0.698 | 0.217 | 0.791 | 0.254 | 1.33 | 0.468 | 15.9 | 20.83 | 1464 | -- | -- |
| 243.34 | 0.727 | 3.27 | 0.484 | 0.231 | 0.654 | 0.102 | -- | 0.362 | 15.1 | 21.7 | 1360 | -- | -- |
| 241.18 | 0.723 | 3.22 | 0.792 | 0.214 | 0.724 | -- | 1.35 | 0.477 | 16 | 21.4 | 1465 | -- | -- |
| 242.27 | 0.725 | 3.29 | 0.515 | 0.224 | 0.6 | -- | -- | 0.337 | 14.4 | 22.21 | 981 | -- | -- |
| 243.38 | 0.727 | 3.22 | 0.732 | -- | 0.671 | -- | 1.11 | 0.451 | -- | 21.6 | 1576 | -- | -- |
| 255.39 | 0.749 | 3.22 | 0.693 | 0.204 | -- | 0.304 | -- | 0.567 | 16.2 | -- | -- | -- | -- |
| 255.63 | 0.749 | 3.22 | 0.696 | 0.205 | -- | -- | -- | 0.568 | 15.9 | -- | -- | -- | -- |
| 245.43 | 0.73 | 3.26 | 0.52 | -- | 0.506 | -- | -- | 0.38 | -- | 22.5 | 790 | -- | -- |
| 247.6 | 0.733 | 3.28 | -- | 0.264 | 0.723 | -- | -- | 0.301 | 14.2 | 21.74 | 963 | -- | -- |
| 257.93 | 0.75 | 3.22 | 0.687 | -- | -- | -- | -- | 0.563 | -- | -- | -- | -- | -- |
| 268.39 | 0.766 | 3.24 | -- | 0.191 | -- | -- | -- | 0.491 | 15.9 | -- | -- | -- | -- |
| 249.58 | 0.736 | 3.28 | -- | -- | 0.754 | -- | -- | 0.293 | -- | 21.6 | 1939 | -- | -- |
| 270.39 | 0.768 | 3.24 | -- | -- | -- | -- | -- | 0.487 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.65 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 5 | 235.99 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 17 | 236.28 | atmosphere | 995.0 | 10 | > th | dose independent | sin | 6 | NA |
| 18 | 236.30 | wind | 9.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 20 | 236.57 | atmosphere | 995.0 | 10 | < th | dose dependent | sin | 6 | NA |
| 21 | 236.58 | atmosphere | 995.0 | 10 | < th | dose independent | sin | 6 | NA |
| 22 | 236.60 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 12 | 1 |
| 23 | 236.64 | atmosphere | 995.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 24 | 236.64 | atmosphere | 995.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 290 | 236.84 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 309 | 237.04 | humidity | 60.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 333 | 237.53 | wind | 9.0 | 10 | > th | dose dependent | rect. | 17 | 1 |
| 342 | 237.85 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 343 | 237.87 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 353 | 238.37 | wind | 9.0 | 4320 | > th | dose independent | rect. | 10 | 4 |
| 354 | 238.37 | wind | 9.0 | 4320 | < th | dose independent | rect. | 6 | 8 |
| 355 | 238.40 | wind | 9.0 | 4320 | < th | dose independent | rect. | 10 | 4 |
| 362 | 238.54 | wind | 9.0 | 4320 | > th | dose independent | rect. | 10 | 7 |
| 371 | 238.71 | wind | 9.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 386 | 239.18 | wind | 9.0 | 4320 | < th | dose independent | rect. | 6 | 11 |
| 388 | 239.21 | wind | 9.0 | 4320 | < th | dose independent | rect. | 10 | 7 |
| 394 | 239.29 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 10 | 4 |
| 401 | 239.35 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 403 | 239.39 | wind | 9.0 | 4320 | > th | dose independent | rect. | 21 | 20 |
| 429 | 239.50 | wind | 9.0 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 436 | 239.55 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 456 | 239.74 | wind | 9.0 | 4320 | < th | dose independent | rect. | 21 | 17 |
| 466 | 239.84 | wind | 9.0 | 4320 | < th | dose independent | rect. | 21 | 20 |
| 468 | 239.86 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 471 | 239.90 | wind | 9.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 502 | 240.19 | wind | 9.0 | 4320 | > th | dose independent | sin | 3 | NA |
| 522 | 240.40 | wind | 9.0 | 4320 | < th | dose independent | sin | 3 | NA |
| 528 | 240.55 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 591 | 240.89 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 631 | 241.15 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 10 | 7 |
| 640 | 241.20 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 14 | 12 |
| 644 | 241.24 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 649 | 241.30 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 5 |
| 653 | 241.35 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 659 | 241.41 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 1 | 13 |
| 662 | 241.44 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 22 | 16 |
| 710 | 241.66 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 14 | 2 |
| 716 | 241.67 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 732 | 241.73 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 745 | 241.83 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 755 | 241.89 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 21 | 9 |
| 763 | 241.97 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 21 | 20 |
| 765 | 241.98 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 21 | 9 |
| 778 | 242.04 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 796 | 242.11 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 797 | 242.12 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 802 | 242.13 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 808 | 242.16 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 816 | 242.18 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 4 |
| 817 | 242.18 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 820 | 242.19 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 13 | 5 |
| 832 | 242.25 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 836 | 242.25 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 10 | 16 |
| 846 | 242.29 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 15 | 8 |
| 857 | 242.31 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 6 |
| 879 | 242.35 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 11 | 12 |
| 910 | 242.43 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 948 | 242.51 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 949 | 242.51 | radiation | 10.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 956 | 242.52 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 967 | 242.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 970 | 242.54 | temperature | 20.0 | 1440 | > th | dose independent | sin | 10 | NA |
| 971 | 242.54 | temperature | 20.0 | 1440 | < th | dose independent | sin | 10 | NA |
| 972 | 242.54 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 985 | 242.57 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 23 | 4 |
| 988 | 242.58 | radiation | 30.0 | 30 | < th | dose independent | rect. | 23 | 12 |