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Os11g0633500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to NBS-LRR disease resistance protein homologue (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.28 (0.0231) R2 : 0.236
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.681 (0.0606) R2dC : 0.213 R2C : 0.2
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.198 (0.0486) R2dN8 : 0.036 R2N8 : 0.0232
σ : 0.436
deviance : 86.78
__
_____
C
peak time of C : 17.8
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
81.48 0.424 7.28 0.252 0.702 -0.266 -0.0793 0.502 0.227 19.1 16.92 14 -- --
82.81 0.424 7.28 0.269 0.707 -0.282 0.0871 -- 0.225 19.2 16.92 13 -- --
81.49 0.42 7.28 0.253 0.702 -0.266 -- 0.485 0.227 19.1 16.89 13 -- --
82.77 0.424 7.28 0.234 0.697 -0.26 -- -- 0.223 19.1 16.85 18 -- --
92.92 0.449 7.33 0.0449 -- -0.487 -- 0.841 0.123 -- 1.864 635 -- --
85.17 0.433 7.27 0.246 0.685 -- -0.0512 -- 0.226 17.8 -- -- -- --
85.17 0.432 7.27 0.247 0.685 -- -- -- 0.226 17.8 -- -- -- --
85.06 0.43 7.27 0.191 -- -0.893 -- -- 0.191 -- 1.5 764 -- --
84.17 0.427 7.28 -- 0.689 -0.264 -- -- 0.204 19.2 16.83 18 -- --
109.47 0.489 7.26 0.225 -- -- -- -- 0.21 -- -- -- -- --
86.78 0.436 7.28 -- 0.681 -- -- -- 0.198 17.8 -- -- -- --
86.04 0.432 7.26 -- -- -0.899 -- -- 0.181 -- 1.31 766 -- --
110.81 0.491 7.27 -- -- -- -- -- 0.185 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 72.90 wind 1.0 270 > th dose independent rect. 7 19
4 73.58 humidity 80.0 270 > th dose independent rect. 3 3
5 73.66 wind 9.0 270 < th dose independent rect. 3 3
6 73.66 temperature 10.0 270 > th dose independent rect. 3 3
8 73.66 temperature 30.0 270 < th dose independent rect. 3 3
9 73.66 humidity 50.0 270 > th dose independent rect. 3 3
12 73.66 atmosphere 995.0 270 > th dose independent rect. 3 3
13 73.66 atmosphere 1015.0 270 < th dose independent rect. 3 3
14 73.66 radiation 20.0 270 < th dose independent rect. 3 3
17 73.66 temperature 10.0 270 > th dose independent rect. 6 21
18 73.67 wind 9.0 270 < th dose independent rect. 1 6
19 73.67 temperature 10.0 270 > th dose independent rect. 1 6
21 73.67 temperature 30.0 270 < th dose independent rect. 1 6
22 73.67 humidity 50.0 270 > th dose independent rect. 1 6
24 73.67 atmosphere 995.0 270 > th dose independent rect. 1 6
25 73.67 atmosphere 1015.0 270 < th dose independent rect. 1 6
26 73.67 radiation 40.0 270 < th dose independent rect. 1 6
27 73.67 temperature 10.0 270 > th dose independent rect. 7 18
28 73.67 precipitation 0.1 270 < th dose independent rect. 7 18
29 73.67 precipitation 0.1 270 < th dose dependent rect. 7 18
32 73.72 precipitation 0.1 270 < th dose independent rect. 1 6
33 73.72 precipitation 0.1 270 < th dose independent rect. 6 21
34 73.72 precipitation 0.1 270 < th dose dependent rect. 1 6
35 73.72 precipitation 0.1 270 < th dose dependent rect. 6 21
36 73.73 precipitation 0.1 270 < th dose independent rect. 3 3
37 73.73 precipitation 0.1 270 < th dose dependent rect. 3 3
51 73.76 radiation 40.0 270 < th dose dependent rect. 2 5
63 73.85 temperature 30.0 90 < th dose independent rect. 16 16
64 73.85 radiation 40.0 270 < th dose dependent rect. 3 3
69 73.92 radiation 40.0 270 < th dose dependent rect. 1 7
70 73.95 humidity 50.0 270 > th dose independent rect. 12 9
87 74.02 atmosphere 995.0 270 > th dose independent rect. 7 18
89 74.04 humidity 50.0 270 > th dose independent rect. 14 16
91 74.07 temperature 30.0 270 < th dose dependent rect. 3 2
95 74.12 wind 9.0 270 < th dose independent rect. 7 18
112 74.17 temperature 30.0 270 < th dose independent rect. 14 17
118 74.21 humidity 50.0 270 > th dose independent rect. 13 7
119 74.21 humidity 60.0 90 > th dose independent rect. 16 16
122 74.22 wind 9.0 270 < th dose dependent rect. 3 3
150 74.27 wind 9.0 270 < th dose independent rect. 6 21
151 74.27 atmosphere 995.0 270 > th dose independent rect. 6 21
152 74.30 humidity 50.0 270 > th dose dependent rect. 3 3
169 74.43 wind 9.0 90 < th dose dependent rect. 3 6
178 74.55 humidity 50.0 270 > th dose independent rect. 3 15
180 74.58 humidity 50.0 270 > th dose dependent rect. 2 5
186 74.61 atmosphere 995.0 270 > th dose dependent rect. 3 3
191 74.64 humidity 50.0 4320 > th dose independent rect. 4 6
193 74.64 temperature 30.0 270 < th dose dependent rect. 1 6
194 74.65 humidity 50.0 270 > th dose independent rect. 21 15
199 74.68 humidity 50.0 270 > th dose independent rect. 20 17
202 74.69 atmosphere 995.0 90 > th dose dependent rect. 3 5
205 74.71 temperature 30.0 270 < th dose independent rect. 20 17
211 74.75 temperature 30.0 270 < th dose independent rect. 21 15
219 74.79 atmosphere 995.0 270 > th dose independent rect. 12 9
243 74.83 precipitation 0.1 270 < th dose independent rect. 21 15
244 74.83 atmosphere 1000.0 270 > th dose independent rect. 20 17
246 74.83 precipitation 0.1 270 < th dose dependent rect. 21 15
247 74.84 temperature 10.0 270 > th dose independent rect. 12 9
248 74.84 temperature 10.0 270 > th dose independent rect. 21 15
249 74.84 atmosphere 995.0 270 > th dose independent rect. 21 15
260 74.90 atmosphere 1015.0 270 < th dose independent rect. 12 9
275 74.94 precipitation 0.1 270 < th dose independent rect. 12 9
276 74.94 precipitation 0.1 270 < th dose dependent rect. 12 9
284 74.98 wind 9.0 1440 < th dose independent rect. 4 5
285 74.98 temperature 10.0 1440 > th dose independent rect. 4 5
290 74.98 atmosphere 995.0 1440 > th dose independent rect. 4 5
291 74.98 atmosphere 1015.0 1440 < th dose independent rect. 4 5
292 74.98 temperature 10.0 1440 > th dose independent rect. 9 19
295 74.99 humidity 50.0 90 > th dose independent rect. 9 18
297 75.00 atmosphere 995.0 270 > th dose dependent rect. 1 6
300 75.04 temperature 30.0 270 < th dose independent rect. 13 7
307 75.05 wind 1.0 270 > th dose independent rect. 12 9
310 75.05 precipitation 0.1 270 < th dose independent rect. 20 17
313 75.05 precipitation 0.1 270 < th dose dependent rect. 20 17
314 75.06 wind 1.0 270 > th dose independent rect. 13 7
315 75.06 atmosphere 995.0 270 > th dose independent rect. 13 7
319 75.07 precipitation 0.1 10 < th dose independent rect. 9 18
322 75.07 precipitation 0.1 10 < th dose dependent rect. 9 18
327 75.11 temperature 10.0 270 > th dose independent rect. 13 7
328 75.11 atmosphere 1015.0 270 < th dose independent rect. 13 7
329 75.11 temperature 10.0 270 > th dose independent rect. 20 17
332 75.12 wind 1.0 90 > th dose independent rect. 8 7
333 75.12 precipitation 0.1 270 < th dose independent rect. 13 7
342 75.12 precipitation 0.1 270 < th dose dependent rect. 13 7
343 75.13 wind 1.0 270 > th dose independent rect. 1 6
349 75.16 atmosphere 995.0 10 > th dose independent rect. 9 18
364 75.18 atmosphere 1015.0 270 < th dose dependent rect. 3 3
367 75.19 precipitation 0.1 10 < th dose independent rect. 3 6
368 75.19 wind 9.0 270 < th dose independent rect. 12 9
369 75.19 wind 9.0 270 < th dose independent rect. 21 15
371 75.19 precipitation 0.1 10 < th dose dependent rect. 3 6
372 75.21 wind 9.0 10 < th dose independent rect. 3 6
373 75.21 temperature 10.0 10 > th dose independent rect. 3 6
375 75.21 temperature 30.0 10 < th dose independent rect. 3 6
376 75.21 humidity 50.0 10 > th dose independent rect. 3 6
378 75.21 atmosphere 995.0 10 > th dose independent rect. 3 6
379 75.21 atmosphere 1015.0 10 < th dose independent rect. 3 6
382 75.21 temperature 10.0 10 > th dose independent rect. 9 18
397 75.26 wind 9.0 270 < th dose independent rect. 13 7
416 75.28 atmosphere 1015.0 270 < th dose dependent rect. 2 5
457 75.34 wind 1.0 270 > th dose independent rect. 20 17
501 75.47 wind 1.0 270 > th dose independent rect. 21 15
521 75.51 wind 9.0 270 < th dose independent rect. 20 17
527 75.55 radiation 40.0 270 < th dose independent rect. 13 18
528 75.55 atmosphere 1000.0 270 > th dose independent rect. 19 19
573 75.67 radiation 1.0 270 > th dose independent rect. 15 15
599 75.71 temperature 10.0 270 > th dose dependent rect. 13 7
622 75.77 temperature 10.0 270 > th dose dependent rect. 3 3
658 75.84 radiation 40.0 270 < th dose independent rect. 12 8
661 75.85 atmosphere 1015.0 90 < th dose independent rect. 8 19
675 75.87 temperature 10.0 90 > th dose dependent rect. 3 5
709 75.91 atmosphere 995.0 90 > th dose independent rect. 8 7
761 75.99 precipitation 0.1 10 < th dose independent rect. 8 21
762 75.99 precipitation 0.1 10 < th dose dependent rect. 8 21
763 76.00 precipitation 0.1 90 < th dose independent rect. 8 7
765 76.00 precipitation 0.1 90 < th dose independent rect. 15 17
769 76.00 precipitation 0.1 90 < th dose dependent rect. 8 7
770 76.00 precipitation 0.1 90 < th dose dependent rect. 15 17
773 76.01 temperature 10.0 90 > th dose independent rect. 8 7
774 76.01 atmosphere 1015.0 90 < th dose independent rect. 8 7
775 76.01 wind 1.0 90 > th dose independent rect. 23 16
776 76.01 temperature 10.0 90 > th dose independent rect. 15 17
827 76.08 precipitation 0.1 10 < th dose independent rect. 5 3
831 76.08 precipitation 0.1 10 < th dose dependent rect. 5 3
836 76.10 radiation 40.0 90 < th dose independent rect. 13 10
864 76.12 atmosphere 995.0 270 > th dose independent rect. 13 18
877 76.14 atmosphere 995.0 10 > th dose dependent rect. 5 3
881 76.15 humidity 50.0 90 > th dose independent rect. 23 16
889 76.16 radiation 40.0 90 < th dose independent rect. 15 17
917 76.19 temperature 30.0 270 < th dose independent rect. 7 6
925 76.20 atmosphere 995.0 90 > th dose independent rect. 15 17
930 76.21 humidity 50.0 270 > th dose independent rect. 6 21
941 76.23 radiation 1.0 10 > th dose independent rect. 5 3
968 76.25 humidity 50.0 30 > th dose independent rect. 8 21
978 76.26 temperature 10.0 270 > th dose independent rect. 13 18