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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0630900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : MATH domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.01 (0.031) R2 : 0.00123
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0491 (0.0653) R2dN8 : 0.00159 R2N8 : 0.00123
σ : 0.585
deviance : 156.83
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
150.38 0.576 3.06 -0.668 0.0251 0.557 0.211 -5.54 -0.000233 9.58 30.03 17 -- --
154.71 0.584 3.01 -0.255 0.0597 0.0968 0.223 -- 0.0233 7.19 30.03 17 -- --
150.53 0.571 3.06 -0.678 0.0318 0.585 -- -5.71 0.000778 7.49 30 17 -- --
154.85 0.583 3.01 -0.25 0.0598 0.0933 -- -- 0.0227 7.06 30 17 -- --
150.58 0.572 3.06 -0.663 -- 0.559 -- -5.54 0.000445 -- 30.1 17 -- --
155.05 0.584 3.01 -0.246 0.0525 -- 0.179 -- 0.0219 8.43 -- -- -- --
155.15 0.583 3.01 -0.24 0.052 -- -- -- 0.022 8.88 -- -- -- --
155.03 0.582 3.01 -0.248 -- 0.0829 -- -- 0.0236 -- 30 17 -- --
156.48 0.586 3.01 -- 0.0551 0.0736 -- -- 0.0502 7.7 30 17 -- --
155.3 0.582 3.01 -0.24 -- -- -- -- 0.0224 -- -- -- -- --
156.67 0.586 3.01 -- 0.0517 -- -- -- 0.0488 9.23 -- -- -- --
156.64 0.585 3.01 -- -- 0.0677 -- -- 0.0508 -- 30 17 -- --
156.83 0.585 3.01 -- -- -- -- -- 0.0491 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 137.39 radiation 10.0 1440 < th dose dependent rect. 21 1
5 137.51 temperature 10.0 1440 > th dose independent rect. 21 1
8 137.51 temperature 30.0 1440 < th dose independent rect. 21 1
12 137.51 humidity 50.0 1440 > th dose independent rect. 21 1
18 137.51 atmosphere 995.0 1440 > th dose independent rect. 21 1
19 137.51 radiation 1.0 1440 < th dose independent rect. 21 1
39 137.51 temperature 10.0 1440 > th dose independent rect. 22 23
42 137.73 temperature 25.0 30 > th dose independent rect. 20 1
44 137.87 atmosphere 1005.0 30 > th dose dependent rect. 20 1
46 137.94 temperature 20.0 30 > th dose dependent rect. 20 1
48 137.95 humidity 90.0 30 < th dose independent rect. 20 1
52 138.04 wind 3.0 30 > th dose independent rect. 20 1
54 138.09 humidity 80.0 30 > th dose independent rect. 20 1
58 138.14 atmosphere 1005.0 30 > th dose independent rect. 20 1
60 138.17 wind 7.0 30 < th dose independent rect. 20 1
67 138.30 temperature 10.0 30 > th dose independent rect. 20 1
69 138.30 temperature 30.0 30 < th dose independent rect. 20 1
70 138.30 humidity 50.0 30 > th dose independent rect. 20 1
74 138.30 atmosphere 1010.0 30 < th dose independent rect. 20 1
76 138.30 radiation 1.0 30 < th dose independent rect. 20 1
81 138.30 precipitation 0.1 30 < th dose independent rect. 20 1
82 138.30 temperature 10.0 30 > th dose independent rect. 21 23
83 138.30 wind 1.0 30 > th dose dependent rect. 20 1
84 138.30 radiation 1.0 30 < th dose dependent rect. 20 1
89 138.30 precipitation 0.1 30 < th dose dependent rect. 20 1
90 138.40 humidity 50.0 30 > th dose dependent rect. 20 1
91 138.42 wind 9.0 30 < th dose dependent rect. 20 1
95 138.55 wind 9.0 1440 < th dose independent rect. 21 1
98 138.70 humidity 90.0 30 < th dose dependent rect. 20 1
100 139.07 atmosphere 1015.0 30 < th dose dependent rect. 20 1
105 139.75 temperature 30.0 30 < th dose dependent rect. 20 1
111 140.27 wind 9.0 30 < th dose independent rect. 21 23
164 144.28 humidity 80.0 30 < th dose dependent rect. 24 2
169 144.37 humidity 80.0 30 < th dose independent rect. 24 2
189 145.89 atmosphere 1005.0 90 > th dose independent rect. 11 1
190 145.89 wind 5.0 30 < th dose independent rect. 11 2
201 146.38 wind 7.0 30 < th dose dependent rect. 11 2
203 146.54 atmosphere 1005.0 720 > th dose independent rect. 10 2
204 146.64 radiation 20.0 90 < th dose independent rect. 10 1
227 147.44 atmosphere 995.0 10 > th dose dependent rect. 11 11
232 147.58 wind 7.0 30 < th dose independent rect. 13 22
238 147.70 radiation 40.0 720 < th dose dependent rect. 24 7
239 147.74 radiation 40.0 720 < th dose independent rect. 21 12
243 147.79 radiation 20.0 720 < th dose independent rect. 24 7
244 147.82 precipitation 0.1 30 < th dose independent rect. 21 23
245 147.82 precipitation 0.1 30 < th dose dependent rect. 21 23
254 147.94 atmosphere 995.0 90 > th dose dependent rect. 11 2
262 147.99 radiation 30.0 90 < th dose dependent rect. 10 1
264 148.03 radiation 10.0 90 < th dose dependent rect. 10 1
265 148.03 atmosphere 995.0 720 > th dose dependent rect. 9 3
268 148.08 humidity 60.0 720 > th dose independent rect. 21 12
279 148.18 radiation 40.0 90 < th dose dependent rect. 19 17
280 148.20 temperature 30.0 10 < th dose independent rect. 21 23
281 148.21 radiation 30.0 30 < th dose independent rect. 12 1
283 148.21 temperature 10.0 720 > th dose independent rect. 9 12
284 148.21 temperature 10.0 720 > th dose independent rect. 21 12
286 148.21 atmosphere 995.0 720 > th dose independent rect. 21 12
294 148.28 precipitation 0.1 720 < th dose independent rect. 21 12
295 148.28 precipitation 0.1 720 < th dose dependent rect. 21 12
296 148.29 wind 9.0 720 < th dose independent rect. 21 12
301 148.31 wind 9.0 720 < th dose independent rect. 24 7
303 148.32 temperature 10.0 720 > th dose independent rect. 24 7
304 148.32 temperature 30.0 720 < th dose independent rect. 24 7
305 148.32 humidity 50.0 720 > th dose independent rect. 24 7
307 148.32 atmosphere 995.0 720 > th dose independent rect. 24 7
310 148.32 temperature 10.0 720 > th dose independent rect. 7 17
314 148.34 atmosphere 1005.0 90 > th dose independent rect. 10 11
315 148.34 atmosphere 995.0 30 > th dose independent rect. 21 23
319 148.37 radiation 10.0 10 > th dose independent rect. 11 2
320 148.37 temperature 10.0 720 > th dose independent rect. 12 7
321 148.37 atmosphere 1015.0 720 < th dose independent rect. 12 7
322 148.37 temperature 10.0 720 > th dose independent rect. 19 17
323 148.37 atmosphere 995.0 720 > th dose independent rect. 19 17
337 148.41 precipitation 0.1 720 < th dose independent rect. 9 12
339 148.41 precipitation 0.1 720 < th dose dependent rect. 9 12
343 148.47 wind 7.0 30 < th dose independent rect. 13 7
344 148.48 temperature 10.0 720 > th dose independent rect. 9 3
345 148.48 atmosphere 995.0 720 > th dose independent rect. 9 3
346 148.48 atmosphere 1015.0 720 < th dose independent rect. 9 3
347 148.48 temperature 10.0 720 > th dose independent rect. 12 21
350 148.49 temperature 10.0 720 > th dose independent rect. 21 3
351 148.49 temperature 30.0 720 < th dose independent rect. 21 3
352 148.49 humidity 50.0 720 > th dose independent rect. 21 3
355 148.49 atmosphere 995.0 720 > th dose independent rect. 21 3
357 148.49 radiation 1.0 720 < th dose independent rect. 21 3
362 148.49 temperature 10.0 720 > th dose independent rect. 24 21
363 148.49 radiation 1.0 720 < th dose dependent rect. 21 3
368 148.50 precipitation 0.1 720 < th dose independent rect. 9 3
369 148.50 precipitation 0.1 720 < th dose dependent rect. 9 3
372 148.52 wind 1.0 30 > th dose independent rect. 13 22
377 148.54 temperature 20.0 90 < th dose independent rect. 1 2
379 148.56 wind 9.0 720 < th dose independent rect. 21 3
380 148.56 atmosphere 1015.0 720 < th dose independent rect. 9 12
381 148.56 temperature 10.0 10 > th dose dependent rect. 22 13
383 148.57 atmosphere 1010.0 30 < th dose independent rect. 11 2
386 148.58 precipitation 0.1 720 < th dose independent rect. 21 3
387 148.58 precipitation 0.1 720 < th dose dependent rect. 21 3
395 148.62 humidity 80.0 90 > th dose independent rect. 11 1
398 148.64 wind 9.0 720 < th dose independent rect. 9 3
402 148.67 humidity 50.0 10 > th dose independent rect. 13 22
409 148.69 wind 1.0 720 > th dose independent rect. 9 12
413 148.70 wind 9.0 720 < th dose independent rect. 19 17
420 148.72 humidity 50.0 720 > th dose independent rect. 19 17
423 148.72 wind 1.0 1440 < th dose dependent rect. 16 2
428 148.73 temperature 10.0 30 > th dose dependent rect. 13 22
437 148.77 temperature 10.0 1440 > th dose independent rect. 12 2
441 148.77 atmosphere 995.0 1440 > th dose independent rect. 12 2
442 148.77 temperature 10.0 1440 > th dose independent rect. 14 22
447 148.79 temperature 10.0 90 > th dose independent rect. 11 2
450 148.79 precipitation 0.1 90 < th dose independent rect. 11 2
451 148.79 humidity 50.0 720 > th dose independent rect. 9 3
453 148.79 temperature 10.0 90 > th dose independent rect. 13 22
455 148.79 precipitation 0.1 90 < th dose dependent rect. 11 2
472 148.83 wind 7.0 10 < th dose independent rect. 22 13
483 148.85 temperature 30.0 270 < th dose independent rect. 21 11
488 148.85 precipitation 0.1 720 < th dose independent rect. 24 21
489 148.85 precipitation 0.1 720 < th dose dependent rect. 24 21
513 148.88 radiation 40.0 30 < th dose dependent rect. 12 1
524 148.91 temperature 30.0 90 > th dose independent rect. 11 2
539 148.93 wind 1.0 720 > th dose independent rect. 9 3
544 148.95 precipitation 0.1 10 < th dose independent rect. 11 11
547 148.95 precipitation 0.1 10 < th dose dependent rect. 11 11
548 148.96 precipitation 0.1 720 < th dose independent rect. 3 6
549 148.96 precipitation 0.1 720 < th dose independent rect. 24 7
550 148.96 temperature 20.0 30 > th dose independent rect. 22 13
552 148.96 precipitation 0.1 720 < th dose dependent rect. 3 6
553 148.96 precipitation 0.1 720 < th dose dependent rect. 24 7
556 148.97 atmosphere 1015.0 30 < th dose independent rect. 21 23
559 148.98 radiation 40.0 720 < th dose independent rect. 3 6
565 149.00 temperature 10.0 720 > th dose dependent rect. 22 2
568 149.01 humidity 60.0 720 > th dose independent rect. 3 6
571 149.02 temperature 10.0 10 > th dose independent rect. 11 11
573 149.02 atmosphere 1015.0 10 < th dose independent rect. 11 11
574 149.02 temperature 10.0 10 > th dose independent rect. 22 13
575 149.02 humidity 50.0 10 > th dose independent rect. 22 13
576 149.02 atmosphere 995.0 10 > th dose independent rect. 22 13
577 149.02 atmosphere 995.0 30 > th dose independent rect. 13 22
581 149.03 temperature 30.0 30 > th dose independent rect. 18 19
602 149.05 wind 1.0 30 > th dose independent rect. 11 2
604 149.05 radiation 1.0 720 > th dose independent rect. 9 3
605 149.05 wind 9.0 720 < th dose independent rect. 3 6
606 149.05 temperature 10.0 720 > th dose independent rect. 3 6
608 149.05 atmosphere 995.0 720 > th dose independent rect. 3 6
610 149.05 temperature 10.0 720 > th dose independent rect. 9 18
635 149.08 wind 1.0 10 > th dose independent rect. 11 11
642 149.09 radiation 20.0 90 < th dose independent rect. 19 17
644 149.10 precipitation 0.1 720 < th dose independent rect. 19 17
648 149.10 precipitation 0.1 720 < th dose dependent rect. 19 17
651 149.11 humidity 50.0 30 > th dose independent rect. 21 23
659 149.13 humidity 50.0 90 > th dose dependent rect. 11 2
661 149.14 atmosphere 1015.0 720 < th dose independent rect. 3 6
662 149.14 precipitation 0.1 30 < th dose independent rect. 13 22
664 149.14 humidity 50.0 720 > th dose dependent rect. 21 3
666 149.14 precipitation 0.1 30 < th dose dependent rect. 13 22
668 149.15 radiation 40.0 30 < th dose independent rect. 13 22
673 149.16 wind 9.0 30 < th dose independent rect. 11 11
678 149.17 precipitation 0.1 720 < th dose independent rect. 9 18
679 149.17 precipitation 0.1 720 < th dose dependent rect. 9 18
682 149.18 radiation 40.0 10 < th dose independent rect. 13 7
689 149.19 wind 1.0 1440 < th dose independent rect. 16 2
693 149.21 temperature 10.0 720 > th dose independent rect. 15 6
694 149.21 temperature 10.0 720 > th dose independent rect. 21 18
703 149.22 temperature 10.0 720 > th dose independent rect. 13 11
705 149.22 temperature 10.0 720 > th dose independent rect. 24 13
706 149.22 atmosphere 995.0 720 > th dose independent rect. 24 13
714 149.23 wind 1.0 1440 > th dose independent rect. 17 2
717 149.23 wind 5.0 30 < th dose independent rect. 20 17
726 149.24 humidity 50.0 10 > th dose independent rect. 11 2
727 149.24 precipitation 0.1 720 < th dose independent rect. 12 7
728 149.24 precipitation 0.1 720 < th dose dependent rect. 12 7
729 149.24 wind 9.0 30 < th dose dependent rect. 13 22
739 149.26 wind 1.0 720 > th dose independent rect. 15 6
742 149.26 humidity 70.0 90 > th dose dependent rect. 10 3
753 149.27 precipitation 0.1 10 < th dose independent rect. 22 13
755 149.27 wind 9.0 720 < th dose independent rect. 12 21
757 149.27 precipitation 0.1 10 < th dose dependent rect. 22 13
758 149.28 temperature 10.0 720 > th dose independent rect. 1 11
759 149.28 atmosphere 995.0 720 > th dose independent rect. 1 11
761 149.28 temperature 10.0 720 > th dose independent rect. 12 13
773 149.30 precipitation 0.1 720 < th dose independent rect. 15 6
774 149.30 precipitation 0.1 720 < th dose independent rect. 12 21
777 149.30 precipitation 0.1 720 < th dose dependent rect. 15 6
778 149.30 precipitation 0.1 720 < th dose dependent rect. 12 21
809 149.40 humidity 50.0 720 > th dose independent rect. 24 13
815 149.41 precipitation 0.1 720 < th dose independent rect. 7 17
818 149.41 precipitation 0.1 720 < th dose dependent rect. 7 17
822 149.43 humidity 90.0 90 < th dose independent rect. 11 2
828 149.43 temperature 10.0 10 > th dose dependent rect. 11 2
833 149.44 humidity 50.0 720 > th dose independent rect. 1 11
842 149.45 wind 9.0 270 < th dose independent rect. 8 13
848 149.47 atmosphere 1015.0 30 < th dose independent rect. 13 22
861 149.48 wind 9.0 720 < th dose independent rect. 1 11
862 149.48 radiation 40.0 10 < th dose independent rect. 13 12
863 149.48 atmosphere 995.0 720 > th dose independent rect. 24 21
871 149.49 precipitation 0.1 720 < th dose independent rect. 21 18
873 149.49 precipitation 0.1 720 < th dose dependent rect. 21 18
927 149.57 temperature 30.0 10 < th dose independent rect. 22 13
928 149.57 precipitation 0.1 720 < th dose independent rect. 24 13
930 149.57 precipitation 0.1 720 < th dose dependent rect. 24 13
931 149.58 wind 5.0 30 < th dose independent rect. 11 10
932 149.58 atmosphere 1000.0 30 > th dose independent rect. 20 17
933 149.58 wind 9.0 720 < th dose independent rect. 21 18
935 149.58 humidity 80.0 10 < th dose independent rect. 13 22
939 149.59 temperature 15.0 30 > th dose independent rect. 20 17
949 149.61 temperature 30.0 30 > th dose independent sin 6 NA
952 149.61 wind 9.0 720 < th dose independent rect. 24 13
983 149.64 precipitation 0.1 720 < th dose independent rect. 1 11
985 149.64 atmosphere 995.0 720 > th dose independent rect. 21 18
990 149.64 precipitation 0.1 720 < th dose dependent rect. 1 11
992 149.65 radiation 10.0 4320 > th dose independent rect. 11 1
998 149.65 humidity 50.0 10 > th dose independent rect. 13 7
999 149.65 wind 1.0 270 > th dose independent rect. 17 11