Os11g0629600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BTB domain containing protein.
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Os11g0629600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BTB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 150.84 | 0.577 | 5.24 | 1.73 | 2.68 | 1.28 | 2.06 | -0.249 | 3.08 | 14.2 | 20.3 | 1188 | -- | -- |
| 150.96 | 0.572 | 5.24 | 1.77 | 2.68 | 1.32 | 2.1 | -- | 3.09 | 14.2 | 20.26 | 1197 | -- | -- |
| 165.93 | 0.6 | 5.25 | 1.74 | 2.69 | 1.31 | -- | -0.44 | 3.1 | 14.2 | 20.4 | 1084 | -- | -- |
| 167.07 | 0.602 | 5.23 | 1.83 | 2.7 | 1.33 | -- | -- | 3.1 | 14.1 | 20.23 | 1076 | -- | -- |
| 508.64 | 1.06 | 5.23 | 2.04 | -- | 1.47 | -- | 0.905 | 3.09 | -- | 20.4 | 1084 | -- | -- |
| 190.06 | 0.646 | 5.18 | 2.3 | 2.57 | -- | 2.3 | -- | 3.37 | 14.3 | -- | -- | -- | -- |
| 209.42 | 0.678 | 5.17 | 2.36 | 2.58 | -- | -- | -- | 3.38 | 14.3 | -- | -- | -- | -- |
| 508.45 | 1.05 | 5.25 | 1.88 | -- | 1.47 | -- | -- | 3.06 | -- | 20.1 | 1690 | -- | -- |
| 224.21 | 0.697 | 5.32 | -- | 2.62 | 2.11 | -- | -- | 2.69 | 14.2 | 20.5 | 2600 | -- | -- |
| 603.98 | 1.15 | 5.19 | 2.25 | -- | -- | -- | -- | 3.32 | -- | -- | -- | -- | -- |
| 356.29 | 0.883 | 5.23 | -- | 2.53 | -- | -- | -- | 3.12 | 14.2 | -- | -- | -- | -- |
| 598.05 | 1.14 | 5.3 | -- | -- | 1.75 | -- | -- | 2.81 | -- | 20.1 | 1690 | -- | -- |
| 737.79 | 1.27 | 5.24 | -- | -- | -- | -- | -- | 3.07 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 142.37 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 6 | 146.28 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 3 |
| 9 | 146.86 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 19 |
| 11 | 147.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 12 | 147.60 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 3 |
| 16 | 148.00 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 6 |
| 18 | 148.20 | temperature | 20 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 20 | 148.26 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 2 |
| 30 | 148.53 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 42 | 148.83 | temperature | 10 | 720 | > th | dose dependent | sin | 5 | NA |
| 60 | 149.33 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 13 |
| 65 | 149.52 | temperature | 20 | 720 | > th | dose independent | rect. | 20 | 20 |
| 75 | 149.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 15 |
| 78 | 149.75 | temperature | 20 | 1440 | < th | dose independent | rect. | 19 | 14 |
| 104 | 149.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 7 | 6 |
| 117 | 150.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 3 |
| 144 | 150.25 | temperature | 20 | 1440 | > th | dose independent | sin | 12 | NA |
| 148 | 150.31 | temperature | 20 | 1440 | < th | dose independent | sin | 12 | NA |
| 188 | 150.66 | temperature | 30 | 90 | < th | dose dependent | rect. | 10 | 19 |
| 231 | 150.96 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 13 |
| 320 | 151.73 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 338 | 151.88 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 342 | 151.92 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 347 | 151.98 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 353 | 152.01 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 12 |
| 464 | 152.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 12 |
| 509 | 152.94 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 542 | 153.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 23 |
| 574 | 153.31 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 21 |
| 599 | 153.42 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 607 | 153.45 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 608 | 153.47 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 654 | 153.68 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 662 | 153.72 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 707 | 153.87 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 714 | 153.91 | temperature | 30 | 720 | < th | dose dependent | sin | 2 | NA |
| 719 | 153.93 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 14 |
| 722 | 153.94 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 23 |
| 945 | 154.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 17 |