Os11g0625900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os11g0625900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 398.93 | 0.938 | 8.2 | 1.12 | 2.09 | 3.54 | 0.952 | 5.02 | -5.43 | 0.734 | 1.25 | 15879 | -- | -- |
| 442.46 | 0.98 | 8.28 | 0.83 | 2.26 | 3.68 | 1.1 | -- | -5.72 | 0.629 | 2.065 | 16158 | -- | -- |
| 402.73 | 0.935 | 8.19 | 1.08 | 2.1 | 3.55 | -- | 5 | -5.44 | 0.783 | 1.25 | 15882 | -- | -- |
| 413.02 | 0.947 | 8.29 | 0.0161 | 2.64 | 3.46 | -- | -- | -5.72 | 1.45 | 1.94 | 16249 | -- | -- |
| 579.71 | 1.12 | 8.18 | 0.803 | -- | 3.97 | -- | 5.2 | -5.52 | -- | 1.39 | 17003 | -- | -- |
| 664.71 | 1.21 | 8.13 | 1.04 | 2.17 | -- | 1.03 | -- | -4.73 | 0.866 | -- | -- | -- | -- |
| 669.12 | 1.21 | 8.13 | 1 | 2.17 | -- | -- | -- | -4.74 | 0.913 | -- | -- | -- | -- |
| 613.31 | 1.15 | 8.35 | 0.351 | -- | 4.01 | -- | -- | -5.97 | -- | 2.097 | 17004 | -- | -- |
| 408.95 | 0.942 | 8.39 | -- | 2.62 | 3.62 | -- | -- | -5.91 | 1.41 | 1.937 | 16249 | -- | -- |
| 962.28 | 1.45 | 8.09 | 1.08 | -- | -- | -- | -- | -4.69 | -- | -- | -- | -- | -- |
| 695.56 | 1.23 | 8.16 | -- | 2.19 | -- | -- | -- | -4.85 | 0.933 | -- | -- | -- | -- |
| 600.19 | 1.14 | 8.41 | -- | -- | 3.71 | -- | -- | -6.06 | -- | 2.1 | 16985 | -- | -- |
| 993.16 | 1.47 | 8.12 | -- | -- | -- | -- | -- | -4.81 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 366.88 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 1 | 5 |
| 2 | 367.17 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 5 | 367.90 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 6 | 368.25 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 7 | 368.25 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 1 | 5 |
| 10 | 368.79 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 11 | 368.79 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 12 | 368.92 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 13 | 368.92 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 14 | 368.93 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 21 | 369.56 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 176 | 382.79 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 15 |
| 184 | 384.07 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 7 | NA |
| 201 | 386.62 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 212 | 387.76 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 7 | NA |
| 213 | 387.76 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 7 | NA |
| 214 | 387.79 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 7 | NA |
| 215 | 387.81 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 221 | 388.22 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 14 | 4 |
| 223 | 388.43 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 224 | 388.44 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 13 |
| 225 | 388.44 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 13 |
| 235 | 389.16 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 249 | 389.41 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 254 | 389.47 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 255 | 389.50 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 268 | 389.74 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 9 | 10 |
| 290 | 390.73 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 13 |
| 304 | 391.64 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 8 | 12 |
| 310 | 391.78 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 314 | 391.87 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 8 | 11 |
| 339 | 392.58 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 342 | 392.64 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 347 | 392.72 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 350 | 392.72 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 373 | 393.35 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 386 | 393.66 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 394 | 393.74 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 412 | 393.97 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 6 | 11 |
| 416 | 394.09 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 426 | 394.17 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 6 | 14 |
| 438 | 394.25 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 449 | 394.33 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 6 | 11 |
| 486 | 394.61 | temperature | 10.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 499 | 394.69 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 16 | 3 |
| 519 | 394.78 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 14 | 6 |
| 523 | 394.80 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 541 | 394.85 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 6 | 15 |
| 575 | 394.99 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 707 | 395.55 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 5 | 17 |
| 741 | 395.67 | humidity | 80.0 | 43200 | > th | dose independent | sin | 22 | NA |
| 752 | 395.70 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 782 | 395.82 | temperature | 10.0 | 43200 | > th | dose dependent | no | NA | NA |
| 790 | 395.84 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 12 | 23 |
| 803 | 395.88 | temperature | 10.0 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 817 | 395.92 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 14 | 16 |