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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0625200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.02 (0.0455) R2 : 0.0873
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.632 (0.0958) R2dN8 : 0.113 R2N8 : 0.0873
σ : 0.857
deviance : 336.83
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
323.73 0.845 3.02 -0.0516 0.0819 -0.625 0.503 0.65 0.656 18.4 1.2 11 -- --
324.27 0.839 3.01 -0.0162 0.0737 -0.585 0.575 -- 0.661 18.1 1.3 11 -- --
324.35 0.839 3.02 -0.0624 0.0841 -0.628 -- 0.737 0.656 18.1 1.2 11 -- --
325.07 0.84 3.01 -0.0201 0.0742 -0.578 -- -- 0.664 18.1 1.293 11 -- --
324.65 0.839 3.02 -0.0557 -- -0.585 -- 0.7 0.653 -- 1.241 11 -- --
334.93 0.858 3.02 0.0637 0.166 -- -0.335 -- 0.634 4.38 -- -- -- --
335.16 0.857 3.02 0.0661 0.165 -- -- -- 0.636 3.56 -- -- -- --
325.31 0.84 3.01 -0.0167 -- -0.542 -- -- 0.661 -- 1.222 11 -- --
325.09 0.84 3.01 -- 0.0736 -0.575 -- -- 0.666 18.1 1.29 11 -- --
336.69 0.857 3.02 0.073 -- -- -- -- 0.641 -- -- -- -- --
335.28 0.857 3.02 -- 0.167 -- -- -- 0.629 3.56 -- -- -- --
325.27 0.84 3.01 -- -- -0.53 -- -- 0.665 -- 1.273 9 -- --
336.83 0.857 3.02 -- -- -- -- -- 0.632 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 319.66 temperature 15.0 30 > th dose independent rect. 3 23
3 320.20 temperature 20.0 90 > th dose dependent rect. 2 2
4 320.33 wind 1.0 10 > th dose independent rect. 18 23
5 320.62 wind 5.0 30 > th dose independent rect. 17 1
9 320.93 wind 1.0 90 < th dose dependent rect. 21 1
14 321.31 wind 1.0 90 < th dose independent rect. 21 1
16 321.39 wind 1.0 90 < th dose dependent rect. 17 5
26 321.92 wind 1.0 90 < th dose independent rect. 16 6
35 322.34 wind 1.0 10 < th dose independent rect. 21 1
46 322.53 temperature 25.0 90 > th dose independent rect. 1 3
49 322.70 wind 1.0 10 < th dose dependent rect. 14 8
50 322.71 wind 3.0 30 > th dose dependent rect. 17 1
52 322.76 temperature 15.0 10 > th dose independent rect. 18 8
57 322.95 radiation 1.0 14400 < th dose dependent rect. 3 1
70 323.08 precipitation 0.1 30 < th dose independent rect. 3 23
71 323.08 precipitation 0.1 30 < th dose dependent rect. 3 23
74 323.20 wind 1.0 10 < th dose independent rect. 2 1
75 323.20 humidity 90.0 30 > th dose dependent rect. 2 1
81 323.38 humidity 90.0 10 > th dose independent rect. 2 1
88 323.40 atmosphere 995.0 30 > th dose independent rect. 3 23
93 323.48 wind 3.0 30 < th dose dependent rect. 2 1
103 323.53 wind 1.0 10 < th dose independent rect. 14 8
107 323.54 wind 5.0 30 < th dose independent rect. 2 1
116 323.57 atmosphere 1005.0 30 > th dose dependent rect. 2 1
119 323.58 temperature 10.0 30 > th dose independent rect. 2 1
121 323.58 temperature 30.0 30 < th dose independent rect. 2 1
122 323.58 humidity 50.0 30 > th dose independent rect. 2 1
125 323.58 atmosphere 995.0 30 > th dose independent rect. 2 1
126 323.58 atmosphere 1010.0 30 < th dose independent rect. 2 1
128 323.58 radiation 1.0 30 < th dose independent rect. 2 1
133 323.58 precipitation 0.1 30 < th dose independent rect. 2 1
135 323.58 atmosphere 995.0 30 > th dose dependent rect. 2 1
137 323.58 radiation 1.0 30 < th dose dependent rect. 2 1
142 323.58 precipitation 0.1 30 < th dose dependent rect. 2 1
144 323.59 wind 9.0 1440 < th dose independent rect. 3 1
145 323.59 temperature 10.0 1440 > th dose independent rect. 3 1
148 323.59 temperature 30.0 1440 < th dose independent rect. 3 1
152 323.59 humidity 50.0 1440 > th dose independent rect. 3 1
162 323.59 atmosphere 995.0 1440 > th dose independent rect. 3 1
163 323.59 radiation 1.0 1440 < th dose independent rect. 3 1
186 323.59 temperature 10.0 1440 > th dose independent rect. 4 23
189 323.59 radiation 1.0 1440 < th dose dependent rect. 3 1
199 323.61 atmosphere 1015.0 30 < th dose dependent rect. 2 1
202 323.62 wind 1.0 10 > th dose independent rect. 9 23
214 323.68 temperature 30.0 30 < th dose dependent rect. 2 1
233 323.90 wind 1.0 10 > th dose independent rect. 5 23
263 323.99 wind 1.0 10 > th dose independent rect. 18 13
265 324.02 wind 1.0 30 > th dose independent rect. 2 1
266 324.04 wind 1.0 10 > th dose independent sin 14 NA
291 324.50 temperature 30.0 90 > th dose dependent rect. 18 16
296 324.59 humidity 50.0 30 > th dose independent rect. 3 23
301 324.69 wind 1.0 10 > th dose independent rect. 18 10
302 324.70 temperature 30.0 90 > th dose dependent rect. 8 1
318 324.73 temperature 30.0 90 > th dose independent rect. 8 1
332 324.79 atmosphere 1005.0 30 > th dose dependent rect. 17 6
350 324.86 temperature 15.0 10 > th dose independent rect. 18 23
410 325.02 temperature 15.0 30 > th dose independent rect. 5 21
439 325.14 temperature 15.0 1440 > th dose independent rect. 14 9
449 325.26 humidity 90.0 30 < th dose independent rect. 18 13
457 325.28 atmosphere 1010.0 30 < th dose independent rect. 18 8
465 325.29 wind 1.0 10 > th dose independent rect. 3 23
468 325.30 temperature 20.0 10 > th dose independent rect. 2 3
483 325.51 humidity 80.0 1440 > th dose dependent rect. 5 11
484 325.52 wind 9.0 30 < th dose independent rect. 3 23
485 325.52 temperature 10.0 30 > th dose dependent rect. 2 16
489 325.55 wind 1.0 10 > th dose independent no NA NA
506 325.63 humidity 70.0 30 > th dose independent rect. 18 8
509 325.64 atmosphere 1005.0 30 > th dose dependent rect. 12 11
513 325.72 radiation 10.0 14400 < th dose dependent rect. 19 8
528 325.86 humidity 70.0 720 > th dose dependent rect. 5 14
562 325.96 temperature 15.0 270 > th dose independent rect. 18 13
564 326.00 wind 1.0 10 > th dose independent rect. 22 15
581 326.10 wind 3.0 10 < th dose dependent rect. 2 8
592 326.14 temperature 30.0 30 < th dose independent rect. 18 8
597 326.14 humidity 70.0 720 > th dose independent rect. 5 12
601 326.15 humidity 80.0 720 < th dose independent rect. 6 2
608 326.19 temperature 20.0 90 > th dose dependent rect. 1 8
612 326.22 wind 1.0 10 < th dose independent rect. 2 21
629 326.23 wind 5.0 90 > th dose dependent rect. 12 2
635 326.25 temperature 30.0 30 < th dose independent rect. 23 13
638 326.26 temperature 20.0 10 < th dose independent rect. 6 2
644 326.29 humidity 80.0 1440 > th dose independent rect. 2 13
646 326.29 wind 1.0 10 > th dose independent rect. 18 19
651 326.31 wind 3.0 10 < th dose dependent rect. 21 13
656 326.33 humidity 70.0 720 > th dose dependent rect. 5 21
660 326.36 humidity 70.0 720 < th dose independent rect. 11 2
673 326.41 wind 1.0 10 > th dose independent rect. 18 8
677 326.42 wind 3.0 10 < th dose dependent rect. 2 20
679 326.45 atmosphere 1000.0 90 < th dose independent rect. 13 1
684 326.46 atmosphere 1000.0 10 < th dose dependent rect. 14 1
690 326.47 humidity 70.0 720 > th dose independent rect. 4 22
698 326.48 humidity 70.0 720 < th dose independent rect. 19 19
728 326.52 wind 1.0 10 < th dose independent rect. 13 1
731 326.52 radiation 1.0 720 > th dose independent rect. 17 21
732 326.52 wind 1.0 10 < th dose dependent rect. 13 1
747 326.55 temperature 10.0 30 > th dose dependent rect. 18 8
748 326.56 temperature 15.0 30 > th dose independent rect. 18 17
760 326.57 humidity 80.0 1440 > th dose dependent sin 1 NA
766 326.59 radiation 40.0 720 > th dose dependent rect. 8 1
773 326.59 radiation 40.0 1440 < th dose dependent rect. 24 7
787 326.60 wind 9.0 30 < th dose independent rect. 2 16
789 326.60 radiation 1.0 30 < th dose dependent rect. 18 8
801 326.63 radiation 1.0 30 < th dose independent rect. 18 8
811 326.64 precipitation 0.1 10 < th dose independent rect. 2 16
813 326.64 precipitation 0.1 10 < th dose dependent rect. 2 16
815 326.66 atmosphere 995.0 30 > th dose independent rect. 2 16
825 326.68 radiation 1.0 1440 > th dose dependent rect. 5 2
832 326.68 temperature 20.0 270 > th dose dependent rect. 23 9
853 326.71 temperature 30.0 30 < th dose independent rect. 3 23
856 326.71 radiation 30.0 1440 < th dose dependent rect. 2 5
863 326.72 wind 1.0 10 > th dose independent rect. 18 17
864 326.72 wind 1.0 10 > th dose independent rect. 22 19
887 326.73 radiation 30.0 1440 < th dose dependent rect. 4 3
888 326.74 temperature 15.0 1440 > th dose independent rect. 17 6
907 326.75 radiation 20.0 1440 < th dose dependent rect. 17 17
909 326.76 radiation 10.0 1440 < th dose independent rect. 24 8
919 326.77 radiation 10.0 1440 > th dose independent rect. 5 2
932 326.77 humidity 80.0 1440 < th dose independent rect. 2 13
938 326.78 radiation 10.0 1440 < th dose independent rect. 4 4
939 326.78 radiation 10.0 1440 < th dose independent rect. 2 6
941 326.78 humidity 90.0 1440 < th dose independent rect. 5 11
945 326.78 atmosphere 1005.0 30 > th dose dependent rect. 2 3
951 326.78 radiation 1.0 720 < th dose dependent rect. 5 21
955 326.79 radiation 10.0 1440 < th dose independent rect. 19 13
956 326.79 temperature 20.0 30 < th dose dependent rect. 6 2
958 326.79 radiation 20.0 1440 < th dose dependent rect. 24 10
960 326.79 radiation 30.0 1440 < th dose dependent rect. 19 12
963 326.80 wind 5.0 90 > th dose independent rect. 12 2
977 326.81 radiation 20.0 1440 < th dose dependent rect. 4 6
978 326.81 radiation 20.0 1440 < th dose dependent rect. 2 8
993 326.82 radiation 20.0 1440 < th dose dependent rect. 20 14
996 326.83 temperature 20.0 10 < th dose independent rect. 6 8
1000 326.83 humidity 50.0 30 > th dose independent rect. 2 16