Os11g0621400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0621400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.15 | 0.394 | 14.5 | -1.07 | 1.65 | -0.776 | 1.62 | -0.3 | -0.736 | 7.77 | 53.06 | 871 | -- | -- |
| 70.24 | 0.39 | 14.5 | -1.09 | 1.64 | -0.786 | 1.51 | -- | -0.739 | 7.78 | 52.87 | 880 | -- | -- |
| 75.73 | 0.405 | 14.5 | -1.11 | 1.64 | -0.782 | -- | 0.805 | -0.75 | 7.76 | 53.71 | 870 | -- | -- |
| 76.66 | 0.408 | 14.5 | -1.05 | 1.61 | -0.732 | -- | -- | -0.745 | 7.77 | 54.98 | 900 | -- | -- |
| 146.75 | 0.564 | 14.5 | -1.07 | -- | 1.04 | -- | 0.187 | -0.664 | -- | 65.15 | 552 | -- | -- |
| 79.31 | 0.417 | 14.5 | -1.05 | 1.37 | -- | 1.38 | -- | -0.72 | 7.39 | -- | -- | -- | -- |
| 84.51 | 0.43 | 14.5 | -1.02 | 1.37 | -- | -- | -- | -0.722 | 7.35 | -- | -- | -- | -- |
| 146.58 | 0.564 | 14.5 | -1.02 | -- | 1.07 | -- | -- | -0.633 | -- | 66 | 541 | -- | -- |
| 104.3 | 0.478 | 14.5 | -- | 1.54 | -0.528 | -- | -- | -0.688 | 6.45 | 78.19 | 922 | -- | -- |
| 184.66 | 0.635 | 14.5 | -0.999 | -- | -- | -- | -- | -0.7 | -- | -- | -- | -- | -- |
| 112.06 | 0.495 | 14.4 | -- | 1.36 | -- | -- | -- | -0.609 | 7.4 | -- | -- | -- | -- |
| 173.55 | 0.614 | 14.5 | -- | -- | 1.08 | -- | -- | -0.523 | -- | 65 | 559 | -- | -- |
| 211.01 | 0.678 | 14.5 | -- | -- | -- | -- | -- | -0.589 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.54 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 13 | 19 |
| 6 | 69.03 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 14 | 20 |
| 10 | 69.28 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 12 | 69.29 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 13 | 6 |
| 36 | 69.59 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 40 | 69.62 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 22 |
| 49 | 69.67 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 55 | 69.73 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 67 | 69.84 | temperature | 30.0 | 270 | < th | dose independent | rect. | 13 | 6 |
| 72 | 69.88 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 73 | 69.88 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 74 | 69.90 | humidity | 60.0 | 270 | > th | dose independent | rect. | 13 | 6 |
| 78 | 69.92 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 20 |
| 86 | 70.00 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 17 |
| 89 | 70.02 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 96 | 70.05 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 13 | 1 |
| 103 | 70.08 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 113 | 70.12 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 13 | 8 |
| 125 | 70.18 | precipitation | 0.1 | 270 | > th | dose independent | sin | 12 | NA |
| 154 | 70.30 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 13 | 16 |
| 159 | 70.31 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 190 | 70.39 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 217 | 70.47 | humidity | 60.0 | 720 | > th | dose dependent | sin | 19 | NA |
| 225 | 70.48 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 10 | 15 |
| 243 | 70.50 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 273 | 70.57 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 292 | 70.61 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 10 | 21 |
| 293 | 70.62 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 19 | 9 |
| 301 | 70.63 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 10 | 12 |
| 390 | 70.79 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 11 | 23 |
| 402 | 70.80 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 23 |
| 408 | 70.81 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 22 | 23 |
| 409 | 70.82 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 429 | 70.85 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 453 | 70.86 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 5 | 23 |
| 467 | 70.88 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 495 | 70.91 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 11 | NA |
| 508 | 70.93 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 2 |
| 509 | 70.93 | humidity | 90.0 | 720 | < th | dose dependent | sin | 19 | NA |
| 534 | 70.97 | radiation | 10.0 | 90 | < th | dose dependent | sin | 0 | NA |
| 552 | 71.00 | humidity | 70.0 | 10 | > th | dose independent | rect. | 13 | 8 |
| 579 | 71.04 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 17 |
| 600 | 71.07 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 14 |
| 631 | 71.09 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 20 | 23 |
| 632 | 71.10 | humidity | 80.0 | 720 | < th | dose independent | rect. | 10 | 10 |
| 673 | 71.14 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 674 | 71.14 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 15 |
| 677 | 71.15 | humidity | 80.0 | 1440 | > th | dose independent | sin | 1 | NA |
| 691 | 71.16 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 694 | 71.16 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 701 | 71.17 | humidity | 80.0 | 30 | > th | dose independent | rect. | 1 | 22 |
| 714 | 71.18 | humidity | 60.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 721 | 71.18 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 747 | 71.21 | humidity | 80.0 | 1440 | < th | dose independent | sin | 2 | NA |
| 749 | 71.21 | humidity | 50.0 | 720 | > th | dose dependent | no | NA | NA |
| 772 | 71.22 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 841 | 71.29 | wind | 1.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 881 | 71.31 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 24 | 23 |
| 918 | 71.35 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 18 | 23 |
| 953 | 71.39 | humidity | 80.0 | 720 | > th | dose independent | rect. | 11 | 9 |
| 962 | 71.40 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 984 | 71.41 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 6 | 19 |